RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 SMARCE1Q969G3 411 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 PERPQ96FX8 193 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 SCMH1Q96GD3 660 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 MCEEQ96PE7 176 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 GSDMAQ96QA5 445 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 OR2A14Q96R47 310 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 EIF3CQ99613 913 aaKnown RBP6.85□□□□□ -1.31
VCAN-207ENST00000507162 SNRNP25Q9BV90 132 aaKnown RBP6.85□□□□□ -1.31
VCAN-207ENST00000507162 C19orf24Q9BVV8 132 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 ADGRE3Q9BY15 652 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 PLA2G12AQ9BZM1 189 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 ZCCHC2Q9C0B9 1178 aaKnown RBP6.85□□□□□ -1.31
VCAN-207ENST00000507162 ZNF304Q9HCX3 659 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 SIX2Q9NPC8 291 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 ETNK2Q9NVF9 386 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 RBM22Q9NW64 420 aaKnown RBP eCLIP6.85□□□□□ -1.31
VCAN-207ENST00000507162 SPHK1Q9NYA1 384 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 IL1RAPL1Q9NZN1 696 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 ZNF282Q9UDV7 671 aaPredicted RBP6.85□□□□□ -1.31
VCAN-207ENST00000507162 KLHL20Q9Y2M5 609 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 ZNF407Q9C0G0 2248 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 A0A0G2JNJ9 132 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 A0A0J9YY10 115 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 BICDL2A1A5D9 508 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 RCCD1A6NED2 376 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 ISM1B1AKI9 464 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 CES2O00748 559 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 FFAR3O14843 346 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 GPR42O15529 346 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 HS6ST1O60243 411 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 SUN1O94901 812 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 CNOT4O95628 575 aaKnown RBP6.84□□□□□ -1.31
VCAN-207ENST00000507162 MSH3P20585 1137 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 TACR1P25103 407 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 AKT1P31749 480 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 PEX19P40855 299 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 CD86P42081 329 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 GRIA3P42263 894 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 FANCCQ00597 558 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 DPYSQ14117 519 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 GRM7Q14831 915 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 FAM214AQ32MH5 1076 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 SLC25A35Q3KQZ1 300 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 GXYLT1Q4G148 440 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 ATP13A4Q4VNC1 1196 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 EMC4Q5J8M3 183 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 LDLRAP1Q5SW96 308 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 GPRC6AQ5T6X5 926 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 ATL3Q6DD88 541 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 ZNF585AQ6P3V2 769 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 DNAJC24Q6P3W2 148 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 SARM1Q6SZW1 724 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 PRSS57Q6UWY2 283 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 UNC5AQ6ZN44 842 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 NT5DC3Q86UY8 548 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 TEX26Q8N6G2 289 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 HORMAD2Q8N7B1 307 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 TTC29Q8NA56 475 aaPredicted RBP6.84□□□□□ -1.31
VCAN-207ENST00000507162 OR5M9Q8NGP3 310 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 ARRDC2Q8TBH0 407 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 VPS35Q96QK1 796 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 CCM2Q9BSQ5 444 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 YIPF4Q9BSR8 244 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 HGH1Q9BTY7 390 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 SARGQ9BW04 601 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 ATG10Q9H0Y0 220 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 DEFB127Q9H1M4 99 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 GOLPH3LQ9H4A5 285 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 TFB2MQ9H5Q4 396 aaKnown RBP6.84□□□□□ -1.31
VCAN-207ENST00000507162 ZWILCHQ9H900 591 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 KCNK13Q9HB14 408 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 YAE1D1Q9NRH1 226 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 STOX2Q9P2F5 926 aaPredicted RBP6.84□□□□□ -1.31
VCAN-207ENST00000507162 Q9UFV3 132 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 CTNND2Q9UQB3 1225 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 ZNF711Q9Y462 761 aa6.84□□□□□ -1.31
VCAN-207ENST00000507162 TUBAL3A6NHL2 446 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 GABRR3A8MPY1 467 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 NPIPA2E9PIF3 369 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 NPIPA3F8WFD2 350 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 H3BRJ5 948 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 SYT5O00445 386 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 IFRD1O00458 451 aaPredicted RBP6.83□□□□□ -1.32
VCAN-207ENST00000507162 F13A1P00488 732 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 CYP1A1P04798 512 aaPredicted RBP6.83□□□□□ -1.32
VCAN-207ENST00000507162 ZSCAN22P10073 491 aaPredicted RBP6.83□□□□□ -1.32
VCAN-207ENST00000507162 GLI4P10075 376 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 EPXP11678 715 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 TFEBP19484 476 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 PSMA2P25787 234 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 NSFP46459 744 aaKnown RBP6.83□□□□□ -1.32
VCAN-207ENST00000507162 GCGRP47871 477 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 HCAR3P49019 387 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 ZNF165P49910 485 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 OGDHQ02218 1023 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 DMTNQ08495 405 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 PTP4A2Q12974 167 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 BECN1Q14457 450 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 MESDQ14696 234 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 PPP2R5EQ16537 467 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms