RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 ATP1A4Q13733 1029 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 GRB7Q14451 532 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 ARHGAP19Q14CB8 494 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 CYP2A13Q16696 494 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 DEFB110Q30KQ9 67 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 TTLL9Q3SXZ7 439 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 FIGLAQ6QHK4 219 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 CLEC18BQ6UXF7 455 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 PRUNE1Q86TP1 453 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 VRK3Q8IV63 474 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 KRT222Q8N1A0 295 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 LINC01555Q8NAE3 123 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 CLEC18CQ8NCF0 446 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 FDCSPQ8NFU4 85 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 GABPB2Q8TAK5 448 aaPredicted RBP13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 CPT1CQ8TCG5 803 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 LKAAEAR1Q8TD35 194 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 PNPLA2Q96AD5 504 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 PBKQ96KB5 322 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 SLC26A1Q9H2B4 701 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 XAB2Q9HCS7 855 aaKnown RBP13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 SLAMF7Q9NQ25 335 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 INTS10Q9NVR2 710 aaKnown RBP13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 MARCH4Q9P2E8 410 aaPredicted RBP13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 ANKMY1Q9P2S6 941 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 TTC7AQ9ULT0 858 aaPredicted RBP13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 JRKLQ9Y4A0 524 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 MED13Q9UHV7 2174 aa13.86□□□□□ -0.19
HMGCS1-203ENST00000507004 RP1L1Q8IWN7 2480 aaPredicted RBP13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 DSCR3O14972 297 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 ZNF185O15231 689 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 SORBS2O94875 1100 aaKnown RBP13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 ALAS2P22557 587 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 GCGRP47871 477 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 MLLT10P55197 1068 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 MYBPC3Q14896 1274 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 ANKRD20A4Q4UJ75 823 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 DCAF10Q5QP82 559 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 C1orf189Q5VU69 101 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 IRAK1BP1Q5VVH5 260 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 PRMT9Q6P2P2 845 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 MICALCLQ6ZW33 695 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 NEK10Q6ZWH5 1172 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 OVCH1Q7RTY7 1134 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 LDB1Q86U70 411 aaPredicted RBP13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 MCUQ8NE86 351 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 COG1Q8WTW3 980 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 LPGAT1Q92604 370 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 MFSD3Q96ES6 412 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 ZNF285Q96NJ3 590 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 NRTNQ99748 197 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 SELENOSQ9BQE4 189 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 CCDC68Q9H2F9 335 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 ATP13A2Q9NQ11 1180 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 SYBUQ9NX95 663 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 DHCR7Q9UBM7 475 aaKnown RBP13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 PLAAQ9Y263 795 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 COMMD10Q9Y6G5 202 aa13.85□□□□□ -0.19
HMGCS1-203ENST00000507004 FAM237BA0A1B0GVD1 139 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 FITM1A5D6W6 292 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 E5RI56 91 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 PRICKLE3O43900 615 aaPredicted RBP13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 CCNDBP1O95273 360 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 MATN4O95460 622 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 CATP04040 527 aaKnown RBP13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 PKMP14618 531 aaKnown RBP13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 CHRM3P20309 590 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 MMP11P24347 488 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 CMPK1P30085 196 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 KCNJ1P48048 391 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 EMP3P54852 163 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 CRADDP78560 199 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 GPS1Q13098 491 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 AIMP2Q13155 320 aaKnown RBP13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 GBX1Q14549 363 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 KCNJ11Q14654 390 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 NEPROQ6NW34 567 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 CASC4Q6P4E1 433 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 IGFL3Q6UXB1 125 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 TTLL10Q6ZVT0 673 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 GALNT16Q8N428 558 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 PRELID2Q8N945 189 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 CALML6Q8TD86 181 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 GRK7Q8WTQ7 553 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 SMPDL3AQ92484 453 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 BIRC8Q96P09 236 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 NUDT9Q9BW91 350 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 CUTCQ9NTM9 273 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 P4HTMQ9NXG6 502 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 MAP4K5Q9Y4K4 846 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 ANKRD12Q6UB98 2062 aa13.84□□□□□ -0.19
HMGCS1-203ENST00000507004 TENM4Q6N022 2769 aa13.83□□□□□ -0.19
HMGCS1-203ENST00000507004 DOPEY2Q9Y3R5 2298 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 SDR42E2A6NKP2 422 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 AGPSO00116 658 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 PCDH17O14917 1159 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 PRPF4O43172 522 aaKnown RBP eCLIP13.83□□□□□ -0.25e-9■□□□□ 8.4
HMGCS1-203ENST00000507004 HCRTR1O43613 425 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 VPS26AO75436 327 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 KRT14P02533 472 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms