RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 FAM171A1Q5VUB5 890 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 MLIPQ5VWP3 458 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 GOLGA7Q7Z5G4 137 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 EEF1AKMT1Q8WVE0 214 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 ELMO1Q92556 727 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 TMCO6Q96DC7 493 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 OR52E6Q96RD3 313 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 FKBP14Q9NWM8 211 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 DOCK4Q8N1I0 1966 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 A8MV72 311 aaPredicted RBP16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 CCRL2O00421 344 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 ARHGAP33O14559 1287 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 CA12O43570 354 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 TLL1O43897 1013 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 ERN1O75460 977 aaKnown RBP16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 UGT2B17O75795 530 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 TRAPPC2P0DI81 140 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 TRAPPC2BP0DI82 140 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 SLC19A1P41440 591 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 TSPY1Q01534 308 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 GALNT3Q14435 633 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 PCBP2Q15366 365 aaKnown RBP eCLIP16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 PARP15Q460N3 678 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 FBXO43Q4G163 708 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 LRIF1Q5T3J3 769 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 ERAP2Q6P179 960 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 FAHD1Q6P587 224 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 C11orf74Q86VG3 221 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 TCAIMQ8N3R3 496 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 KRTCAP2Q8N6L1 136 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 PAF1Q8N7H5 531 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 SCAMP5Q8TAC9 235 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 SUN5Q8TC36 379 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 TMEM40Q8WWA1 233 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 HRASLS5Q96KN8 279 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 NEDD4LQ96PU5 975 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 TTYH2Q9BSA4 534 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 TNKS2Q9H2K2 1166 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 ABCC13Q9NSE7 274 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 ERVK13-1Q9NX77 482 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 GPSM3Q9Y4H4 160 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 PCDHGA6Q9Y5G7 932 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 CCNDBP1O95273 360 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 SEMG1P04279 462 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 CDK1P06493 297 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 DUSP7Q16829 419 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 PTPRNQ16849 979 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 SMU1Q2TAY7 513 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 TBRG1Q3YBR2 411 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 Q5BKY6 102 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 P3H2Q8IVL5 708 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 PEX5LQ8IYB4 626 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 CHCHD4Q8N4Q1 142 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 SIDT2Q8NBJ9 832 aaKnown RBP16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 DNAJB8Q8NHS0 232 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 ZNF675Q8TD23 568 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 MYDGFQ969H8 173 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 LINGO1Q96FE5 620 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 EGLN2Q96KS0 407 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 PHOX2BQ99453 314 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 PCDHGB2Q9Y5G2 931 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 HMX3A6NHT5 357 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 FAM25AB3EWG3 89 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 FAM25CB3EWG5 89 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 FAM25GB3EWG6 89 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 WNT9AO14904 365 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 NDUFS3O75489 264 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 ZNF682O95780 498 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 EPOP01588 193 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 KRT6AP02538 564 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 KRT6BP04259 564 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 MYCLP1P12525 358 aaPredicted RBP16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 ITGA2P17301 1181 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 RFX2P48378 723 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 PGFP49763 221 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 IL2P60568 153 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 MAD2L1Q13257 205 aaPredicted RBP16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 PIK3R6Q5UE93 754 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 ZNF438Q7Z4V0 828 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 RAB43Q86YS6 212 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 LIX1Q8N485 282 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 ATG16L2Q8NAA4 619 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 JPH3Q8WXH2 748 aaPredicted RBP16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 C1orf74Q96LT6 269 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 ZFP42Q96MM3 310 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 RAD9AQ99638 391 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 SEMA3CQ99985 751 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 SLC30A2Q9BRI3 323 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 SERHLQ9NQF3 203 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 NLE1Q9NVX2 485 aaPredicted RBP16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 SIRT5Q9NXA8 310 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 NUDT4Q9NZJ9 180 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 KIF17Q9P2E2 1029 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 RBPJLQ9UBG7 517 aa16.67■□□□□ 0.26
SQSTM1-211ENST00000506690 LOC105371267A0A1B0GV96 52 aa16.66■□□□□ 0.26
SQSTM1-211ENST00000506690 ERVH48-1M5A8F1 160 aa16.66■□□□□ 0.26
SQSTM1-211ENST00000506690 VPS26AO75436 327 aa16.66■□□□□ 0.26
SQSTM1-211ENST00000506690 DIRAS1O95057 198 aa16.66■□□□□ 0.26
SQSTM1-211ENST00000506690 HOXB9P17482 250 aaPredicted RBP16.66■□□□□ 0.26
SQSTM1-211ENST00000506690 CA5AP35218 305 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms