RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 KCNE4Q8WWG9 221 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 ASB11Q8WXH4 323 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 VPS39Q96JC1 886 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 SLC41A2Q96JW4 573 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 HIST1H2AHQ96KK5 128 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 OR6C1Q96RD1 312 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 NDNQ99608 321 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 CPNE1Q99829 537 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 HIST1H2AJQ99878 128 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 H2AFJQ9BTM1 129 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 FANCEQ9HB96 536 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 SYTL2Q9HCH5 934 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 LRRC4CQ9HCJ2 640 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 PDE7BQ9NP56 450 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 ZDHHC18Q9NUE0 388 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 SOHLH2Q9NX45 425 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.03□□□□□ -1.28
GYPB-206ENST00000506516 DMGDHQ9UI17 866 aaKnown RBP7.03□□□□□ -1.28
GYPB-206ENST00000506516 ACSL6Q9UKU0 697 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 POMT2Q9UKY4 750 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 ICKQ9UPZ9 632 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 RAXQ9Y2V3 346 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 NFS1Q9Y697 457 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 MYLKQ15746 1914 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 A0A087WV48 116 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 PMS2P1A4D2B8 440 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 SLC9B1P1A6NJY1 282 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 STMND1H3BQB6 276 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 GFYI3L273 518 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 SLC16A5O15375 505 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 ZNF500O60304 480 aaPredicted RBP7.02□□□□□ -1.29
GYPB-206ENST00000506516 PRAMEF10O60809 474 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 SYF2O95926 243 aaKnown RBP7.02□□□□□ -1.29
GYPB-206ENST00000506516 C8GP07360 202 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 F7P08709 466 aaPredicted RBP7.02□□□□□ -1.29
GYPB-206ENST00000506516 TPBGLP0DKB5 382 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 LIPCP11150 499 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 SNRPBP14678 240 aaKnown RBP7.02□□□□□ -1.29
GYPB-206ENST00000506516 CYP2A7P20853 494 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 SAT1P21673 171 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 PKLRP30613 574 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 SPRP35270 261 aaPredicted RBP7.02□□□□□ -1.29
GYPB-206ENST00000506516 GP5P40197 560 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 KPNA2P52292 529 aaKnown RBP7.02□□□□□ -1.29
GYPB-206ENST00000506516 CDKN2DP55273 166 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 GPX6P59796 221 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 PPP1CAP62136 330 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 TUBB4BP68371 445 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 POU4F1Q01851 419 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 NAB1Q13506 487 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 GRB7Q14451 532 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 SLMAPQ14BN4 828 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 ARHGAP19Q14CB8 494 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 SF1Q15637 639 aaKnown RBP7.02□□□□□ -1.29
GYPB-206ENST00000506516 RBM20Q5T481 1227 aaKnown RBP7.02□□□□□ -1.29
GYPB-206ENST00000506516 LCE2AQ5TA79 106 aaPredicted RBP7.02□□□□□ -1.29
GYPB-206ENST00000506516 GRTP1Q5TC63 336 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 ANKS6Q68DC2 871 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 ALKBH2Q6NS38 261 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 SPESP1Q6UW49 350 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 TREML4Q6UXN2 200 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 UBE2R2Q712K3 238 aaPredicted RBP7.02□□□□□ -1.29
GYPB-206ENST00000506516 ZC3HC1Q86WB0 502 aaKnown RBP7.02□□□□□ -1.29
GYPB-206ENST00000506516 PPP1R3BQ86XI6 285 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 RELL1Q8IUW5 271 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 RASGRP3Q8IV61 690 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 D2HGDHQ8N465 521 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 NKAPQ8N5F7 415 aaKnown RBP7.02□□□□□ -1.29
GYPB-206ENST00000506516 PPM1NQ8N819 430 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 FBXO15Q8NCQ5 510 aaPredicted RBP7.02□□□□□ -1.29
GYPB-206ENST00000506516 OR2L8Q8NGY9 312 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 OR8K5Q8NH50 307 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 MCOLN3Q8TDD5 553 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 FBF1Q8TES7 1133 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 EEF1AKMT1Q8WVE0 214 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 N4BP2L2Q92802 583 aaPredicted RBP7.02□□□□□ -1.29
GYPB-206ENST00000506516 TSPAN17Q96FV3 270 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 TCTN2Q96GX1 697 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 NAF1Q96HR8 494 aaKnown RBP7.02□□□□□ -1.29
GYPB-206ENST00000506516 ELMO2Q96JJ3 720 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 HSH2DQ96JZ2 352 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 FCRL4Q96PJ5 515 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 TRAPPC9Q96Q05 1148 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 FMO2Q99518 471 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 SLC30A3Q99726 388 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 CTRCQ99895 268 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 TRIM54Q9BYV2 358 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 RHOJQ9H4E5 214 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 RUBCNLQ9H714 662 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 NEUROD4Q9HD90 331 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 INTS7Q9NVH2 962 aaKnown RBP7.02□□□□□ -1.29
GYPB-206ENST00000506516 SPATA7Q9P0W8 599 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 SERTAD3Q9UJW9 196 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 RARRES3Q9UL19 164 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 PLAGL1Q9UM63 463 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 RUVBL2Q9Y230 463 aaKnown RBP7.02□□□□□ -1.29
GYPB-206ENST00000506516 MED16Q9Y2X0 877 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 B3GALT1Q9Y5Z6 326 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 FREM2Q5SZK8 3169 aa7.02□□□□□ -1.29
GYPB-206ENST00000506516 NCOR2Q9Y618 2525 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms