RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 CUL1Q13616 776 aa16.08■□□□□ 0.16
PDLIM7-215ENST00000506161 DHX34Q14147 1143 aaKnown RBP16.08■□□□□ 0.16
PDLIM7-215ENST00000506161 NCF4Q15080 339 aa16.08■□□□□ 0.16
PDLIM7-215ENST00000506161 IGFBP7Q16270 282 aa16.08■□□□□ 0.16
PDLIM7-215ENST00000506161 MSS51Q4VC12 460 aa16.08■□□□□ 0.16
PDLIM7-215ENST00000506161 LACTB2Q53H82 288 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-215ENST00000506161 NEPROQ6NW34 567 aa16.08■□□□□ 0.16
PDLIM7-215ENST00000506161 CASC4Q6P4E1 433 aa16.08■□□□□ 0.16
PDLIM7-215ENST00000506161 OTOAQ7RTW8 1153 aa16.08■□□□□ 0.16
PDLIM7-215ENST00000506161 LRRC6Q86X45 466 aa16.08■□□□□ 0.16
PDLIM7-215ENST00000506161 IGDCC3Q8IVU1 814 aa16.08■□□□□ 0.16
PDLIM7-215ENST00000506161 APLFQ8IW19 511 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-215ENST00000506161 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-215ENST00000506161 PWWP2AQ96N64 755 aa16.08■□□□□ 0.16
PDLIM7-215ENST00000506161 WDR83Q9BRX9 315 aaKnown RBP16.08■□□□□ 0.16
PDLIM7-215ENST00000506161 TSSK1BQ9BXA7 367 aa16.08■□□□□ 0.16
PDLIM7-215ENST00000506161 CHRNA10Q9GZZ6 450 aa16.08■□□□□ 0.16
PDLIM7-215ENST00000506161 EURLQ9NYK6 297 aa16.08■□□□□ 0.16
PDLIM7-215ENST00000506161 SLC17A6Q9P2U8 582 aa16.08■□□□□ 0.16
PDLIM7-215ENST00000506161 PYCARDQ9ULZ3 195 aa16.08■□□□□ 0.16
PDLIM7-215ENST00000506161 MYO9AB2RTY4 2548 aa16.08■□□□□ 0.16
PDLIM7-215ENST00000506161 AP3B1O00203 1094 aa16.07■□□□□ 0.16
PDLIM7-215ENST00000506161 RFPL1O75677 317 aa16.07■□□□□ 0.16
PDLIM7-215ENST00000506161 MLNP12872 115 aa16.07■□□□□ 0.16
PDLIM7-215ENST00000506161 PKMP14618 531 aaKnown RBP16.07■□□□□ 0.16
PDLIM7-215ENST00000506161 IVDP26440 423 aa16.07■□□□□ 0.16
PDLIM7-215ENST00000506161 PGGT1BP53609 377 aa16.07■□□□□ 0.16
PDLIM7-215ENST00000506161 SNRPNP63162 240 aaKnown RBP16.07■□□□□ 0.16
PDLIM7-215ENST00000506161 TMED2Q15363 201 aa16.07■□□□□ 0.16
PDLIM7-215ENST00000506161 KLHL38Q2WGJ6 581 aa16.07■□□□□ 0.16
PDLIM7-215ENST00000506161 ZNF470Q6ECI4 717 aa16.07■□□□□ 0.16
PDLIM7-215ENST00000506161 FRMPD2BQ6IN97 320 aa16.07■□□□□ 0.16
PDLIM7-215ENST00000506161 MRNIPQ6NTE8 343 aa16.07■□□□□ 0.16
PDLIM7-215ENST00000506161 RHBDD2Q6NTF9 364 aa16.07■□□□□ 0.16
PDLIM7-215ENST00000506161 FIGLAQ6QHK4 219 aa16.07■□□□□ 0.16
PDLIM7-215ENST00000506161 MIPEPQ99797 713 aa16.07■□□□□ 0.16
PDLIM7-215ENST00000506161 SLC6A20Q9NP91 592 aa16.07■□□□□ 0.16
PDLIM7-215ENST00000506161 STOX2Q9P2F5 926 aaPredicted RBP16.07■□□□□ 0.16
PDLIM7-215ENST00000506161 SNX7Q9UNH6 387 aa16.07■□□□□ 0.16
PDLIM7-215ENST00000506161 SHANK1Q9Y566 2161 aa16.07■□□□□ 0.16
PDLIM7-215ENST00000506161 LRRK2Q5S007 2527 aa16.06■□□□□ 0.16
PDLIM7-215ENST00000506161 CLEC18AA5D8T8 446 aa16.06■□□□□ 0.16
PDLIM7-215ENST00000506161 SDR42E2A6NKP2 422 aa16.06■□□□□ 0.16
PDLIM7-215ENST00000506161 ZSCAN9O15535 394 aaPredicted RBP16.06■□□□□ 0.16
PDLIM7-215ENST00000506161 ERGP11308 486 aa16.06■□□□□ 0.16
PDLIM7-215ENST00000506161 CCL11P51671 97 aa16.06■□□□□ 0.16
PDLIM7-215ENST00000506161 ADARP55265 1226 aaKnown RBP16.06■□□□□ 0.16
PDLIM7-215ENST00000506161 ATP1A4Q13733 1029 aa16.06■□□□□ 0.16
PDLIM7-215ENST00000506161 CLEC18BQ6UXF7 455 aa16.06■□□□□ 0.16
PDLIM7-215ENST00000506161 COX15Q7KZN9 410 aa16.06■□□□□ 0.16
PDLIM7-215ENST00000506161 HOOK3Q86VS8 718 aa16.06■□□□□ 0.16
PDLIM7-215ENST00000506161 MCATQ8IVS2 390 aaKnown RBP16.06■□□□□ 0.16
PDLIM7-215ENST00000506161 CLEC18CQ8NCF0 446 aa16.06■□□□□ 0.16
PDLIM7-215ENST00000506161 OR2A1Q8NGT9 310 aa16.06■□□□□ 0.16
PDLIM7-215ENST00000506161 SKA2Q8WVK7 121 aaPredicted RBP16.06■□□□□ 0.16
PDLIM7-215ENST00000506161 MESP1Q9BRJ9 268 aa16.06■□□□□ 0.16
PDLIM7-215ENST00000506161 SLC39A10Q9ULF5 831 aa16.06■□□□□ 0.16
PDLIM7-215ENST00000506161 PLCL2Q9UPR0 1127 aa16.06■□□□□ 0.16
PDLIM7-215ENST00000506161 LOC105369274A0A096LPK9 316 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 IGKV1-8A0A0C4DH67 115 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 LOC102723532A0A0G2JNH3 316 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 PSIP1O75475 530 aaKnown RBP16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 HAUS5O94927 633 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 ESR1P03372 595 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 UMODP07911 640 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 CHRM3P20309 590 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 GABRB3P28472 473 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 FNTAP49354 379 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 SF1Q15637 639 aaKnown RBP16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 MLIPQ5VWP3 458 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 TCTN3Q6NUS6 607 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 SUSD1Q6UWL2 747 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 CYHR1Q6ZMK1 362 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 SDCCAG8Q86SQ7 713 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 OR4N4Q8N0Y3 316 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 METTL27Q8N6F8 245 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 PPFIBP2Q8ND30 876 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 OR2L3Q8NG85 312 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 RAD51AP1Q96B01 352 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 PDLIM2Q96JY6 352 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 ZNF285Q96NJ3 590 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 PSMG3-AS1Q96PY0 264 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 TCF12Q99081 682 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 PKP4Q99569 1192 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 ING2Q9H160 280 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 XAB2Q9HCS7 855 aaKnown RBP16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 MLXIPLQ9NP71 852 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 MAD1L1Q9Y6D9 718 aa16.05■□□□□ 0.16
PDLIM7-215ENST00000506161 F8W8V4 182 aa16.04■□□□□ 0.16
PDLIM7-215ENST00000506161 MKRN2OSH3BPM6 223 aa16.04■□□□□ 0.16
PDLIM7-215ENST00000506161 DNALI1O14645 258 aaPredicted RBP16.04■□□□□ 0.16
PDLIM7-215ENST00000506161 TP73O15350 636 aa16.04■□□□□ 0.16
PDLIM7-215ENST00000506161 NRDCO43847 1150 aa16.04■□□□□ 0.16
PDLIM7-215ENST00000506161 USP1O94782 785 aa16.04■□□□□ 0.16
PDLIM7-215ENST00000506161 CASRP41180 1078 aa16.04■□□□□ 0.16
PDLIM7-215ENST00000506161 FOXK1P85037 733 aa16.04■□□□□ 0.16
PDLIM7-215ENST00000506161 DHX9Q08211 1270 aaKnown RBP16.04■□□□□ 0.16
PDLIM7-215ENST00000506161 CYP2A13Q16696 494 aa16.04■□□□□ 0.16
PDLIM7-215ENST00000506161 NADK2Q4G0N4 442 aa16.04■□□□□ 0.16
PDLIM7-215ENST00000506161 RNF187Q5TA31 235 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms