RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 RPL21P46778 160 aaKnown RBP3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 MAZP56270 477 aaKnown RBP3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 SP3Q02447 781 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 GCNT1Q02742 428 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 PPIGQ13427 754 aaKnown RBP eCLIP3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 CUL3Q13618 768 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 ITGA7Q13683 1181 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 SQLEQ14534 574 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 RRS1Q15050 365 aaKnown RBP3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 TCTE1Q5JU00 501 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 FFAR4Q5NUL3 377 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 ARHGAP11AQ6P4F7 1023 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 MAML2Q8IZL2 1156 aaPredicted RBP3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 LGI2Q8N0V4 545 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 OR4C3Q8NH37 302 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 OR52N5Q8NH56 324 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 TMEM190Q8WZ59 177 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 PIGBQ92521 554 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 SPSB1Q96BD6 273 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 LGALS12Q96DT0 336 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 GIMAP5Q96F15 307 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 FER1L6-AS2Q96M78 137 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 LRRC3BQ96PB8 259 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 LITAFQ99732 161 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 AP1M1Q9BXS5 423 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 SLC2A11Q9BYW1 496 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 VPS33BQ9H267 617 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 ERVMER34-1Q9H9K5 563 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 CDH20Q9HBT6 801 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 ZNF71Q9NQZ8 489 aaPredicted RBP3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 WDR83OSQ9Y284 106 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 DISP3Q9P2K9 1392 aa3.63□□□□□ -1.83
TOPBP1-204ENST00000505804 A0A1W2PPK0 400 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 TSPY2A6NKD2 308 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 C2orf81A6NN90 581 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 AP5Z1O43299 807 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 PENKP01210 267 aaPredicted RBP3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 CSN3P07498 182 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 FAM157CP0CG43 387 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 TSPY3P0CV98 308 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 TSPY8P0CW00 308 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 IGHV4-31P0DP07 118 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 SAGP10523 405 aaPredicted RBP3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 EEF1B2P24534 225 aaKnown RBP3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 HSPA4P34932 840 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 WNT5AP41221 380 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 ZNF41P51814 821 aaPredicted RBP3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 NR0B1P51843 470 aaKnown RBP3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 UBASH3AP57075 661 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 TSPY1Q01534 308 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 HERC3Q15034 1050 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 HYAL4Q2M3T9 481 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 SLC25A53Q5H9E4 307 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 OTUD3Q5T2D3 398 aaPredicted RBP3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 C20orf194Q5TEA3 1177 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 CCDC186Q7Z3E2 898 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 TLK2Q86UE8 772 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 MMD2Q8IY49 270 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 OR4K1Q8NGD4 311 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 EXT2Q93063 718 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 FAM71F1Q96KD3 344 aaPredicted RBP3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 PRAC1Q96KF2 57 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 CCDC3Q9BQI4 270 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 SLC25A23Q9BV35 468 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 OR2B2Q9GZK3 357 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 SHARPINQ9H0F6 387 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 TRPV4Q9HBA0 871 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 DNAJC4Q9NNZ3 241 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 P4HTMQ9NXG6 502 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 STUB1Q9UNE7 303 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 LIPGQ9Y5X9 500 aa3.62□□□□□ -1.83
TOPBP1-204ENST00000505804 ZG16O60844 167 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 DFFBO76075 338 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 RECQL5O94762 991 aaPredicted RBP3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 GPIP06744 558 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 HMBSP08397 361 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 IRF2P14316 349 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 DARSP14868 501 aaKnown RBP3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 CSTF2P33240 577 aaKnown RBP eCLIP3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 HERV-K104P61576 105 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 MZT1Q08AG7 82 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 ZNF273Q14593 569 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 TMEM30BQ3MIR4 351 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 PPP1R21Q6ZMI0 780 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 NOTCH2NLQ7Z3S9 236 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 ADCK2Q7Z695 626 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 SLFN11Q7Z7L1 901 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 OR2T11Q8NH01 316 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 KIF18AQ8NI77 898 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 VANGL1Q8TAA9 524 aaPredicted RBP3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 SIPA1Q96FS4 1042 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 LRR1Q96L50 414 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 KATNB1Q9BVA0 655 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 PRRG4Q9BZD6 226 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 CPVLQ9H3G5 476 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 FZD8Q9H461 694 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 TLE6Q9H808 572 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 Q9H8V8 135 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 ZCCHC17Q9NP64 241 aaKnown RBP3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 FAM207AQ9NSI2 230 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms