RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 IQCKQ8N0W5 287 aa23.7■■□□□ 1.38
HERC4-212ENST00000505760 ATP13A2Q9NQ11 1180 aa23.7■■□□□ 1.38
HERC4-212ENST00000505760 EIF2B3Q9NR50 452 aaKnown RBP23.7■■□□□ 1.38
HERC4-212ENST00000505760 B3GNT3Q9Y2A9 372 aa23.7■■□□□ 1.38
HERC4-212ENST00000505760 PCM1Q15154 2024 aa23.69■■□□□ 1.38
HERC4-212ENST00000505760 KPNA5O15131 536 aa23.69■■□□□ 1.38
HERC4-212ENST00000505760 NDUFS3O75489 264 aa23.69■■□□□ 1.38
HERC4-212ENST00000505760 IPO13O94829 963 aaKnown RBP23.69■■□□□ 1.38
HERC4-212ENST00000505760 BASP1P80723 227 aaKnown RBP23.69■■□□□ 1.38
HERC4-212ENST00000505760 CCNG2Q16589 344 aa23.69■■□□□ 1.38
HERC4-212ENST00000505760 C4orf17Q53FE4 359 aa23.69■■□□□ 1.38
HERC4-212ENST00000505760 TCTE1Q5JU00 501 aa23.69■■□□□ 1.38
HERC4-212ENST00000505760 FIGLAQ6QHK4 219 aa23.69■■□□□ 1.38
HERC4-212ENST00000505760 OTOAQ7RTW8 1153 aa23.69■■□□□ 1.38
HERC4-212ENST00000505760 RAB42Q8N4Z0 105 aa23.69■■□□□ 1.38
HERC4-212ENST00000505760 OTUD6BQ8N6M0 293 aa23.69■■□□□ 1.38
HERC4-212ENST00000505760 SSC4DQ8WTU2 575 aa23.69■■□□□ 1.38
HERC4-212ENST00000505760 TM9SF4Q92544 642 aa23.69■■□□□ 1.38
HERC4-212ENST00000505760 FKBP10Q96AY3 582 aa23.69■■□□□ 1.38
HERC4-212ENST00000505760 RAD51AP1Q96B01 352 aa23.69■■□□□ 1.38
HERC4-212ENST00000505760 IL22Q9GZX6 179 aa23.69■■□□□ 1.38
HERC4-212ENST00000505760 SLC22A11Q9NSA0 550 aa23.69■■□□□ 1.38
HERC4-212ENST00000505760 BFARQ9NZS9 450 aa23.69■■□□□ 1.38
HERC4-212ENST00000505760 TTC7AQ9ULT0 858 aaPredicted RBP23.69■■□□□ 1.38
HERC4-212ENST00000505760 HIVEP3Q5T1R4 2406 aa23.69■■□□□ 1.38
HERC4-212ENST00000505760 AGPSO00116 658 aa23.68■■□□□ 1.38
HERC4-212ENST00000505760 MASP2O00187 686 aa23.68■■□□□ 1.38
HERC4-212ENST00000505760 SEMA7AO75326 666 aa23.68■■□□□ 1.38
HERC4-212ENST00000505760 GCGRP47871 477 aa23.68■■□□□ 1.38
HERC4-212ENST00000505760 MRPL49Q13405 166 aaKnown RBP23.68■■□□□ 1.38
HERC4-212ENST00000505760 GRM7Q14831 915 aa23.68■■□□□ 1.38
HERC4-212ENST00000505760 EIF2S3LQ2VIR3 472 aaKnown RBP23.68■■□□□ 1.38
HERC4-212ENST00000505760 MEI1Q5TIA1 1274 aa23.68■■□□□ 1.38
HERC4-212ENST00000505760 YOD1Q5VVQ6 348 aaPredicted RBP23.68■■□□□ 1.38
HERC4-212ENST00000505760 FCRL6Q6DN72 434 aa23.68■■□□□ 1.38
HERC4-212ENST00000505760 IGFL3Q6UXB1 125 aa23.68■■□□□ 1.38
HERC4-212ENST00000505760 C4orf22Q6V702 233 aa23.68■■□□□ 1.38
HERC4-212ENST00000505760 GSTA5Q7RTV2 222 aa23.68■■□□□ 1.38
HERC4-212ENST00000505760 LRRC6Q86X45 466 aa23.68■■□□□ 1.38
HERC4-212ENST00000505760 MPP5Q8N3R9 675 aa23.68■■□□□ 1.38
HERC4-212ENST00000505760 SELENOSQ9BQE4 189 aa23.68■■□□□ 1.38
HERC4-212ENST00000505760 ILKAPQ9H0C8 392 aaPredicted RBP23.68■■□□□ 1.38
HERC4-212ENST00000505760 P2RY12Q9H244 342 aa23.68■■□□□ 1.38
HERC4-212ENST00000505760 ZNF552Q9H707 407 aaPredicted RBP23.68■■□□□ 1.38
HERC4-212ENST00000505760 TREX1Q9NSU2 369 aa23.68■■□□□ 1.38
HERC4-212ENST00000505760 CUTCQ9NTM9 273 aa23.68■■□□□ 1.38
HERC4-212ENST00000505760 CDC23Q9UJX2 597 aa23.68■■□□□ 1.38
HERC4-212ENST00000505760 MRFAP1Q9Y605 127 aa23.68■■□□□ 1.38
HERC4-212ENST00000505760 TEX15Q9BXT5 2789 aa23.68■■□□□ 1.38
HERC4-212ENST00000505760 AP3B1O00203 1094 aa23.67■■□□□ 1.38
HERC4-212ENST00000505760 DSCR3O14972 297 aa23.67■■□□□ 1.38
HERC4-212ENST00000505760 FKBP9O95302 570 aa23.67■■□□□ 1.38
HERC4-212ENST00000505760 ITGAXP20702 1163 aa23.67■■□□□ 1.38
HERC4-212ENST00000505760 MMP11P24347 488 aa23.67■■□□□ 1.38
HERC4-212ENST00000505760 NPY2RP49146 381 aa23.67■■□□□ 1.38
HERC4-212ENST00000505760 EIF3BP55884 814 aaKnown RBP23.67■■□□□ 1.38
HERC4-212ENST00000505760 OVCH1Q7RTY7 1134 aa23.67■■□□□ 1.38
HERC4-212ENST00000505760 TMEM151BQ8IW70 566 aa23.67■■□□□ 1.38
HERC4-212ENST00000505760 ZADH2Q8N4Q0 377 aa23.67■■□□□ 1.38
HERC4-212ENST00000505760 TTC29Q8NA56 475 aaPredicted RBP23.67■■□□□ 1.38
HERC4-212ENST00000505760 PRR7Q8TB68 274 aa23.67■■□□□ 1.38
HERC4-212ENST00000505760 ZUFSPQ96AP4 578 aa23.67■■□□□ 1.38
HERC4-212ENST00000505760 NACC2Q96BF6 587 aa23.67■■□□□ 1.38
HERC4-212ENST00000505760 SNRNP40Q96DI7 357 aaKnown RBP23.67■■□□□ 1.38
HERC4-212ENST00000505760 C19orf60Q96EN9 201 aa23.67■■□□□ 1.38
HERC4-212ENST00000505760 FOPNLQ96NB1 174 aa23.67■■□□□ 1.38
HERC4-212ENST00000505760 WDR54Q9H977 334 aa23.67■■□□□ 1.38
HERC4-212ENST00000505760 CUEDC1Q9NWM3 386 aaPredicted RBP23.67■■□□□ 1.38
HERC4-212ENST00000505760 PLEKHB1Q9UF11 243 aaPredicted RBP23.67■■□□□ 1.38
HERC4-212ENST00000505760 DRG1Q9Y295 367 aaKnown RBP23.67■■□□□ 1.38
HERC4-212ENST00000505760 C1orf105O95561 183 aa23.66■■□□□ 1.38
HERC4-212ENST00000505760 ALBP02768 609 aa23.66■■□□□ 1.38
HERC4-212ENST00000505760 RPS3P23396 243 aaKnown RBP eCLIP23.66■■□□□ 1.38
HERC4-212ENST00000505760 MCM3P25205 808 aa23.66■■□□□ 1.38
HERC4-212ENST00000505760 ITGA3P26006 1051 aa23.66■■□□□ 1.38
HERC4-212ENST00000505760 NMBRP28336 390 aa23.66■■□□□ 1.38
HERC4-212ENST00000505760 BDKRB1P46663 353 aa23.66■■□□□ 1.38
HERC4-212ENST00000505760 SOX8P57073 446 aa23.66■■□□□ 1.38
HERC4-212ENST00000505760 AIMP2Q13155 320 aaKnown RBP23.66■■□□□ 1.38
HERC4-212ENST00000505760 SIX1Q15475 284 aaPredicted RBP23.66■■□□□ 1.38
HERC4-212ENST00000505760 DRICH1Q6PGQ1 229 aaPredicted RBP23.66■■□□□ 1.38
HERC4-212ENST00000505760 CISD2Q8N5K1 135 aaKnown RBP23.66■■□□□ 1.38
HERC4-212ENST00000505760 FBXL4Q9UKA2 621 aa23.66■■□□□ 1.38
HERC4-212ENST00000505760 RUVBL2Q9Y230 463 aaKnown RBP23.66■■□□□ 1.38
HERC4-212ENST00000505760 NFS1Q9Y697 457 aa23.66■■□□□ 1.38
HERC4-212ENST00000505760 DOCK10Q96BY6 2186 aa23.66■■□□□ 1.38
HERC4-212ENST00000505760 TARM1B6A8C7 271 aa23.65■■□□□ 1.38
HERC4-212ENST00000505760 NKG7Q16617 165 aa23.65■■□□□ 1.38
HERC4-212ENST00000505760 FAM214AQ32MH5 1076 aa23.65■■□□□ 1.38
HERC4-212ENST00000505760 CNSTQ6PJW8 725 aa23.65■■□□□ 1.38
HERC4-212ENST00000505760 SDCCAG8Q86SQ7 713 aaPredicted RBP23.65■■□□□ 1.38
HERC4-212ENST00000505760 MIPEPQ99797 713 aa23.65■■□□□ 1.38
HERC4-212ENST00000505760 ASF1BQ9NVP2 202 aa23.65■■□□□ 1.38
HERC4-212ENST00000505760 ZKSCAN5Q9Y2L8 839 aa23.65■■□□□ 1.38
HERC4-212ENST00000505760 MDC1Q14676 2089 aaKnown RBP23.64■■□□□ 1.38
HERC4-212ENST00000505760 PRICKLE3O43900 615 aaPredicted RBP23.64■■□□□ 1.37
HERC4-212ENST00000505760 VAPBO95292 243 aa23.64■■□□□ 1.37
HERC4-212ENST00000505760 ONECUT2O95948 504 aa23.64■■□□□ 1.37
HERC4-212ENST00000505760 MGAT1P26572 445 aa23.64■■□□□ 1.37
HERC4-212ENST00000505760 PSMB5P28074 263 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 234.1 ms