RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 MESP1Q9BRJ9 268 aa12.64□□□□□ -0.39
DDX41-204ENST00000504807 NUDT9Q9BW91 350 aa12.64□□□□□ -0.39
DDX41-204ENST00000504807 CARD6Q9BX69 1037 aa12.64□□□□□ -0.39
DDX41-204ENST00000504807 SLC29A3Q9BZD2 475 aa12.64□□□□□ -0.39
DDX41-204ENST00000504807 ING2Q9H160 280 aa12.64□□□□□ -0.39
DDX41-204ENST00000504807 SHANK1Q9Y566 2161 aa12.64□□□□□ -0.39
DDX41-204ENST00000504807 NIPBLQ6KC79 2804 aaeCLIP12.64□□□□□ -0.39
DDX41-204ENST00000504807 ISM1B1AKI9 464 aa12.63□□□□□ -0.39
DDX41-204ENST00000504807 QSOX1O00391 747 aa12.63□□□□□ -0.39
DDX41-204ENST00000504807 NIPSNAP2O75323 286 aa12.63□□□□□ -0.39
DDX41-204ENST00000504807 OR2B3O76000 313 aa12.63□□□□□ -0.39
DDX41-204ENST00000504807 SORBS2O94875 1100 aaKnown RBP12.63□□□□□ -0.39
DDX41-204ENST00000504807 GRIA3P42263 894 aa12.63□□□□□ -0.39
DDX41-204ENST00000504807 VPS41P49754 854 aa12.63□□□□□ -0.39
DDX41-204ENST00000504807 RAPSNQ13702 412 aa12.63□□□□□ -0.39
DDX41-204ENST00000504807 SLC5A12Q1EHB4 618 aa12.63□□□□□ -0.39
DDX41-204ENST00000504807 LYPLAL1Q5VWZ2 237 aa12.63□□□□□ -0.39
DDX41-204ENST00000504807 CAND1Q86VP6 1230 aaKnown RBP12.63□□□□□ -0.39
DDX41-204ENST00000504807 ZNF655Q8N720 491 aaPredicted RBP12.63□□□□□ -0.39
DDX41-204ENST00000504807 FDCSPQ8NFU4 85 aa12.63□□□□□ -0.39
DDX41-204ENST00000504807 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.63□□□□□ -0.39
DDX41-204ENST00000504807 THAP4Q8WY91 577 aa12.63□□□□□ -0.39
DDX41-204ENST00000504807 LPGAT1Q92604 370 aa12.63□□□□□ -0.39
DDX41-204ENST00000504807 SLC30A3Q99726 388 aa12.63□□□□□ -0.39
DDX41-204ENST00000504807 KIFC1Q9BW19 673 aa12.63□□□□□ -0.39
DDX41-204ENST00000504807 FANCEQ9HB96 536 aa12.63□□□□□ -0.39
DDX41-204ENST00000504807 OR6C2Q9NZP2 312 aa12.63□□□□□ -0.39
DDX41-204ENST00000504807 POLG2Q9UHN1 485 aa12.63□□□□□ -0.39
DDX41-204ENST00000504807 SNX7Q9UNH6 387 aa12.63□□□□□ -0.39
DDX41-204ENST00000504807 ENTPD4Q9Y227 616 aa12.63□□□□□ -0.39
DDX41-204ENST00000504807 PPP2R2CQ9Y2T4 447 aa12.63□□□□□ -0.39
DDX41-204ENST00000504807 NEU2Q9Y3R4 380 aa12.63□□□□□ -0.39
DDX41-204ENST00000504807 TACC2O95359 2948 aa12.62□□□□□ -0.39
DDX41-204ENST00000504807 A0A1W2PPV9 198 aa12.62□□□□□ -0.39
DDX41-204ENST00000504807 PRMT5O14744 637 aaPredicted RBP12.62□□□□□ -0.39
DDX41-204ENST00000504807 CTSVO60911 334 aa12.62□□□□□ -0.39
DDX41-204ENST00000504807 VAPBO95292 243 aa12.62□□□□□ -0.39
DDX41-204ENST00000504807 KLK3P07288 261 aaPredicted RBP12.62□□□□□ -0.39
DDX41-204ENST00000504807 UMODP07911 640 aa12.62□□□□□ -0.39
DDX41-204ENST00000504807 CCDC175P0C221 793 aa12.62□□□□□ -0.39
DDX41-204ENST00000504807 CD9P21926 228 aa12.62□□□□□ -0.39
DDX41-204ENST00000504807 RAB28P51157 221 aa12.62□□□□□ -0.39
DDX41-204ENST00000504807 SNRPNP63162 240 aaKnown RBP12.62□□□□□ -0.39
DDX41-204ENST00000504807 FASTKQ14296 549 aaKnown RBP12.62□□□□□ -0.39
DDX41-204ENST00000504807 GBX1Q14549 363 aa12.62□□□□□ -0.39
DDX41-204ENST00000504807 DNAJC21Q5F1R6 531 aaKnown RBP12.62□□□□□ -0.39
DDX41-204ENST00000504807 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.62□□□□□ -0.39
DDX41-204ENST00000504807 PAPD7Q5XG87 772 aaKnown RBP12.62□□□□□ -0.39
DDX41-204ENST00000504807 RHBDD2Q6NTF9 364 aa12.62□□□□□ -0.39
DDX41-204ENST00000504807 CENPUQ71F23 418 aa12.62□□□□□ -0.39
DDX41-204ENST00000504807 COX15Q7KZN9 410 aa12.62□□□□□ -0.39
DDX41-204ENST00000504807 AMER2Q8N7J2 671 aa12.62□□□□□ -0.39
DDX41-204ENST00000504807 Q8NA96 180 aa12.62□□□□□ -0.39
DDX41-204ENST00000504807 GIMAP7Q8NHV1 300 aa12.62□□□□□ -0.39
DDX41-204ENST00000504807 PEX13Q92968 403 aa12.62□□□□□ -0.39
DDX41-204ENST00000504807 CHRNA10Q9GZZ6 450 aa12.62□□□□□ -0.39
DDX41-204ENST00000504807 SYTL2Q9HCH5 934 aa12.62□□□□□ -0.39
DDX41-204ENST00000504807 SERTAD3Q9UJW9 196 aa12.62□□□□□ -0.39
DDX41-204ENST00000504807 MED16Q9Y2X0 877 aa12.62□□□□□ -0.39
DDX41-204ENST00000504807 A6NL46 340 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 RASGRF2O14827 1237 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 ZNF185O15231 689 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 ZSCAN9O15535 394 aaPredicted RBP12.61□□□□□ -0.39
DDX41-204ENST00000504807 ALOX12BO75342 701 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 C1orf105O95561 183 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 GAS8O95995 478 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 TPSB2P20231 275 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 RPS3P23396 243 aaKnown RBP eCLIP12.61□□□□□ -0.39
DDX41-204ENST00000504807 FMO4P31512 558 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 OTX2P32243 289 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 MAGEA6P43360 314 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 EIF3BP55884 814 aaKnown RBP12.61□□□□□ -0.39
DDX41-204ENST00000504807 KIR2DS3Q14952 304 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 NR6A1Q15406 480 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 TPSAB1Q15661 275 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 TYSND1Q2T9J0 566 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 MLIPQ5VWP3 458 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 FRMPD2BQ6IN97 320 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 MRPL14Q6P1L8 145 aaKnown RBP12.61□□□□□ -0.39
DDX41-204ENST00000504807 LRRC8BQ6P9F7 803 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 ZNF449Q6P9G9 518 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 CNSTQ6PJW8 725 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 NLRP9Q7RTR0 991 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 GSTA5Q7RTV2 222 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 PPP1R32Q7Z5V6 425 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 MRGPREQ86SM8 312 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 DCUN1D3Q8IWE4 304 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 SHISA5Q8N114 240 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 RASGEF1CQ8N431 466 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 OR2L8Q8NGY9 312 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 ASZ1Q8WWH4 475 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.61□□□□□ -0.39
DDX41-204ENST00000504807 IL22Q9GZX6 179 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 ACSS2Q9NR19 701 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 EURLQ9NYK6 297 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 STOX2Q9P2F5 926 aaPredicted RBP12.61□□□□□ -0.39
DDX41-204ENST00000504807 SOX13Q9UN79 622 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 MED13LQ71F56 2210 aa12.61□□□□□ -0.39
DDX41-204ENST00000504807 ANKHD1Q8IWZ3 2542 aaKnown RBP12.6□□□□□ -0.39
DDX41-204ENST00000504807 APOA4P06727 396 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms