RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 DLX3O60479 287 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 PRAMEF10O60809 474 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 WFS1O76024 890 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 UBXN7O94888 489 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 VIPP01282 170 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 GSTA1P08263 222 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 RPS17P08708 135 aaKnown RBP4.77□□□□□ -1.65
LMNB1-208ENST00000504788 ANKRD34CP0C6C1 535 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 FTH1P19P0C7X4 201 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 ALPPL2P10696 532 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 THRAP10827 490 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 CD22P20273 847 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 PSMB5P28074 263 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 PRDX3P30048 256 aaKnown RBP4.77□□□□□ -1.65
LMNB1-208ENST00000504788 RPA3P35244 121 aaPredicted RBP4.77□□□□□ -1.65
LMNB1-208ENST00000504788 HALP42357 657 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 GDF5P43026 501 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 MAPK9P45984 424 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 AGTR2P50052 363 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 KPNA2P52292 529 aaKnown RBP4.77□□□□□ -1.65
LMNB1-208ENST00000504788 AP1S2P56377 157 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 WDR4P57081 412 aaKnown RBP4.77□□□□□ -1.65
LMNB1-208ENST00000504788 CCL7P80098 99 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 GPLD1P80108 840 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 PCLAFQ15004 111 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 SETDB1Q15047 1291 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 PCBP2Q15366 365 aaKnown RBP eCLIP4.77□□□□□ -1.65
LMNB1-208ENST00000504788 RSPO4Q2I0M5 234 aaPredicted RBP4.77□□□□□ -1.65
LMNB1-208ENST00000504788 PTCHD3Q3KNS1 767 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 FBXO48Q5FWF7 155 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 ZNF787Q6DD87 383 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 ZNF425Q6IV72 752 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 C16orf46Q6P387 395 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 AGTRAPQ6RW13 159 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 HDXQ7Z353 690 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 RAB44Q7Z6P3 723 aaPredicted RBP4.77□□□□□ -1.65
LMNB1-208ENST00000504788 ADAMTSL2Q86TH1 951 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 AMIGO1Q86WK6 493 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 FAM20CQ8IXL6 584 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 SRRM1Q8IYB3 904 aaKnown RBP4.77□□□□□ -1.65
LMNB1-208ENST00000504788 CACTIN-AS1Q8N1I8 211 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 MYO1HQ8N1T3 1032 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 DCBLD1Q8N8Z6 715 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 AVL9Q8NBF6 648 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 OR4E2Q8NGC2 313 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 OR4K1Q8NGD4 311 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 CFAP61Q8NHU2 1237 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 STAG3L4Q8TBR4 150 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 SETD7Q8WTS6 366 aaKnown RBP4.77□□□□□ -1.65
LMNB1-208ENST00000504788 ADAMTS14Q8WXS8 1223 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 ESAMQ96AP7 390 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 CXorf40BQ96DE9 158 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 WDR34Q96EX3 536 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 PRR11Q96HE9 360 aaPredicted RBP4.77□□□□□ -1.65
LMNB1-208ENST00000504788 APOPT1Q96IL0 206 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 CCDC138Q96M89 665 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 FERD3LQ96RJ6 166 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 CDC6Q99741 560 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 CCDC77Q9BR77 488 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 SARGQ9BW04 601 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 CHRNA10Q9GZZ6 450 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 VPS11Q9H270 941 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 SPNS1Q9H2V7 528 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 LRRN3Q9H3W5 708 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 NMRAL1Q9HBL8 299 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 FAM60AQ9NP50 221 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 SIDT1Q9NXL6 827 aaKnown RBP4.77□□□□□ -1.65
LMNB1-208ENST00000504788 UTP6Q9NYH9 597 aaKnown RBP4.77□□□□□ -1.65
LMNB1-208ENST00000504788 NCKIPSDQ9NZQ3 722 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 SPATA7Q9P0W8 599 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 SLC17A7Q9P2U7 560 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 FTSJ1Q9UET6 329 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 POLG2Q9UHN1 485 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 TSR3Q9UJK0 312 aaKnown RBP4.77□□□□□ -1.65
LMNB1-208ENST00000504788 PILRAQ9UKJ1 303 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 ENTPD2Q9Y5L3 495 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 COLEC10Q9Y6Z7 277 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 IGHV5-51A0A0C4DH38 117 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 CPED1A4D0V7 1026 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 PMS2P1A4D2B8 440 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 OR2A25A4D2G3 310 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 A8MT66 165 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 H3BQF6 201 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 GLRA3O75311 464 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 SIX3O95343 332 aaPredicted RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 CPNE6O95741 557 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 CATP04040 527 aaKnown RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 CAPNS1P04632 268 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 RPLP0P05388 317 aaKnown RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 CTSBP07858 339 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 CHRM5P08912 532 aaPredicted RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 MSL3P1P0C860 447 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 ST6GAL1P15907 406 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 TYRP1P17643 537 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 KRT15P19012 456 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 CCKBRP32239 447 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 SHMT2P34897 504 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 PNLIPRP1P54315 467 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 TBPL1P62380 186 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 C16orf72Q14CZ0 275 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms