RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 BNIP2Q12982 314 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 ADGRE1Q14246 886 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 WSCD2Q2TBF2 565 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 NANOGP8Q6NSW7 305 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 CRTC3Q6UUV7 619 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 HEATR4Q86WZ0 1026 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 LILRA2Q8N149 483 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 HDDC3Q8N4P3 179 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 KLHL4Q9C0H6 718 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 CLMPQ9H6B4 373 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 NANOGQ9H9S0 305 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 CIDEBQ9UHD4 219 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 TMEM98Q9Y2Y6 226 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 E7EQ34 232 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 ACADLP28330 430 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 TIE1P35590 1138 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 E2F2Q14209 437 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 RABL3Q5HYI8 236 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 PDSS2Q86YH6 399 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 HID1Q8IV36 788 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 WDR20Q8TBZ3 569 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 ZNF480Q8WV37 535 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 MED8Q96G25 268 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 ZBTB18Q99592 522 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 TRIM8Q9BZR9 551 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 DPY30Q9C005 99 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 DLGAP4Q9Y2H0 992 aa20.72■□□□□ 0.91
UBE2D3-216ENST00000503742 C15orf38-AP3S2A0A0A6YYH1 394 aa20.71■□□□□ 0.91
UBE2D3-216ENST00000503742 PCDH8O95206 1070 aa20.71■□□□□ 0.91
UBE2D3-216ENST00000503742 PCCBP05166 539 aa20.71■□□□□ 0.91
UBE2D3-216ENST00000503742 ATP6V1B2P21281 511 aa20.71■□□□□ 0.91
UBE2D3-216ENST00000503742 LTBRP36941 435 aa20.71■□□□□ 0.91
UBE2D3-216ENST00000503742 CASP2P42575 452 aa20.71■□□□□ 0.91
UBE2D3-216ENST00000503742 EEFSECP57772 596 aaKnown RBP20.71■□□□□ 0.91
UBE2D3-216ENST00000503742 RPS14P62263 151 aaKnown RBP20.71■□□□□ 0.91
UBE2D3-216ENST00000503742 CDK3Q00526 305 aa20.71■□□□□ 0.91
UBE2D3-216ENST00000503742 HTR4Q13639 388 aa20.71■□□□□ 0.91
UBE2D3-216ENST00000503742 DOC2AQ14183 400 aa20.71■□□□□ 0.91
UBE2D3-216ENST00000503742 NFE2L1Q14494 772 aa20.71■□□□□ 0.91
UBE2D3-216ENST00000503742 XKR6Q5GH73 641 aa20.71■□□□□ 0.91
UBE2D3-216ENST00000503742 GRHL2Q6ISB3 625 aa20.71■□□□□ 0.91
UBE2D3-216ENST00000503742 CYP2R1Q6VVX0 501 aa20.71■□□□□ 0.91
UBE2D3-216ENST00000503742 ARPINQ7Z6K5 226 aa20.71■□□□□ 0.91
UBE2D3-216ENST00000503742 SLCO4A1Q96BD0 722 aa20.71■□□□□ 0.91
UBE2D3-216ENST00000503742 MIEF2Q96C03 454 aa20.71■□□□□ 0.91
UBE2D3-216ENST00000503742 COPS7BQ9H9Q2 264 aaPredicted RBP20.71■□□□□ 0.91
UBE2D3-216ENST00000503742 TMED5Q9Y3A6 229 aa20.71■□□□□ 0.91
UBE2D3-216ENST00000503742 A0A1W2PP55 124 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 CAPNS1P04632 268 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 PRPS2P11908 318 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 ACPPP15309 386 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 GSK3BP49841 420 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 SEC13P55735 322 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 LRRC36Q1X8D7 754 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 SFT2D3Q587I9 215 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 IRAK1BP1Q5VVH5 260 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 FAM83HQ6ZRV2 1179 aaPredicted RBP20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 TRMT11Q7Z4G4 463 aaKnown RBP20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 MSLNLQ96KJ4 702 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 FCRL1Q96LA6 429 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 PKP2Q99959 881 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 OR52A5Q9H2C5 316 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 ALG2Q9H553 416 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 ACTR3BQ9P1U1 418 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 NEUROG3Q9Y4Z2 214 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 ANHXE9PGG2 379 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 H0YIV9 168 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 RNASEH2AO75792 299 aaKnown RBP20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 PCSK2P16519 638 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 SLC7A1P30825 629 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 HNF4AP41235 474 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 CLDN8P56748 225 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 CSTF3Q12996 717 aaKnown RBP20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 PWP1Q13610 501 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 ZNF776Q68DI1 518 aaPredicted RBP20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 LCN8Q6JVE9 175 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 PTRH1Q86Y79 214 aaKnown RBP20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 KRTCAP2Q8N6L1 136 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 OR9A1PQ8NGU1 263 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 OR2T34Q8NGX1 318 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 OR2T3Q8NH03 318 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 SLC13A3Q8WWT9 602 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 FAM131CQ96AQ9 280 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 APIPQ96GX9 242 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 LRGUKQ96M69 825 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 LGR4Q9BXB1 951 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 ZDHHC5Q9C0B5 715 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 CLDND1Q9NY35 253 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 GPRC5BQ9NZH0 403 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 AP4S1Q9Y587 144 aa20.7■□□□□ 0.9
UBE2D3-216ENST00000503742 AQP12BA6NM10 295 aa20.69■□□□□ 0.9
UBE2D3-216ENST00000503742 STAMBPO95630 424 aa20.69■□□□□ 0.9
UBE2D3-216ENST00000503742 IL6P05231 212 aa20.69■□□□□ 0.9
UBE2D3-216ENST00000503742 AMD1P17707 334 aa20.69■□□□□ 0.9
UBE2D3-216ENST00000503742 TEAD1P28347 426 aa20.69■□□□□ 0.9
UBE2D3-216ENST00000503742 LIPEQ05469 1076 aa20.69■□□□□ 0.9
UBE2D3-216ENST00000503742 PLA2G4EQ3MJ16 856 aa20.69■□□□□ 0.9
UBE2D3-216ENST00000503742 FAM174BQ3ZCQ3 159 aa20.69■□□□□ 0.9
UBE2D3-216ENST00000503742 KIAA1211LQ6NV74 962 aa20.69■□□□□ 0.9
UBE2D3-216ENST00000503742 AQP12AQ8IXF9 295 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms