RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 FAM129CQ86XR2 697 aa24.24■■□□□ 1.47
LSM6-202ENST00000502781 OR2A1Q8NGT9 310 aa24.24■■□□□ 1.47
LSM6-202ENST00000502781 TAAR9Q96RI9 348 aa24.24■■□□□ 1.47
LSM6-202ENST00000502781 CHRNA10Q9GZZ6 450 aa24.24■■□□□ 1.47
LSM6-202ENST00000502781 IKBKGQ9Y6K9 419 aa24.24■■□□□ 1.47
LSM6-202ENST00000502781 ACACAQ13085 2346 aa24.23■■□□□ 1.47
LSM6-202ENST00000502781 A0A0J9YY10 115 aa24.23■■□□□ 1.47
LSM6-202ENST00000502781 TMEM8BA6NDV4 472 aa24.23■■□□□ 1.47
LSM6-202ENST00000502781 ZNF839A8K0R7 811 aa24.23■■□□□ 1.47
LSM6-202ENST00000502781 POC1B-GALNT4F8VUJ3 575 aa24.23■■□□□ 1.47
LSM6-202ENST00000502781 SYF2O95926 243 aaKnown RBP24.23■■□□□ 1.47
LSM6-202ENST00000502781 ALDOAP04075 364 aaKnown RBP24.23■■□□□ 1.47
LSM6-202ENST00000502781 CCDC166P0CW27 439 aa24.23■■□□□ 1.47
LSM6-202ENST00000502781 PVRP15151 417 aa24.23■■□□□ 1.47
LSM6-202ENST00000502781 MAGEA12P43365 314 aa24.23■■□□□ 1.47
LSM6-202ENST00000502781 AP1S2P56377 157 aa24.23■■□□□ 1.47
LSM6-202ENST00000502781 SH3BP2P78314 561 aa24.23■■□□□ 1.47
LSM6-202ENST00000502781 TAX1BP1Q86VP1 789 aa24.23■■□□□ 1.47
LSM6-202ENST00000502781 SMPDL3AQ92484 453 aa24.23■■□□□ 1.47
LSM6-202ENST00000502781 DDA1Q9BW61 102 aa24.23■■□□□ 1.47
LSM6-202ENST00000502781 PARD6BQ9BYG5 372 aa24.23■■□□□ 1.47
LSM6-202ENST00000502781 THSD1Q9NS62 852 aa24.23■■□□□ 1.47
LSM6-202ENST00000502781 STOX2Q9P2F5 926 aaPredicted RBP24.23■■□□□ 1.47
LSM6-202ENST00000502781 RAB21Q9UL25 225 aa24.23■■□□□ 1.47
LSM6-202ENST00000502781 AHCTF1Q8WYP5 2266 aa24.23■■□□□ 1.47
LSM6-202ENST00000502781 FRYQ5TBA9 3013 aa24.22■■□□□ 1.47
LSM6-202ENST00000502781 C9orf172C9J069 976 aa24.22■■□□□ 1.47
LSM6-202ENST00000502781 MSL3P1P0C860 447 aa24.22■■□□□ 1.47
LSM6-202ENST00000502781 CD1DP15813 335 aa24.22■■□□□ 1.47
LSM6-202ENST00000502781 CNTFP26441 200 aa24.22■■□□□ 1.47
LSM6-202ENST00000502781 MAPK10P53779 464 aa24.22■■□□□ 1.47
LSM6-202ENST00000502781 RAB15P59190 212 aa24.22■■□□□ 1.47
LSM6-202ENST00000502781 ATP6V0D1P61421 351 aa24.22■■□□□ 1.47
LSM6-202ENST00000502781 EMBQ6PCB8 327 aa24.22■■□□□ 1.47
LSM6-202ENST00000502781 ADGRD1Q6QNK2 874 aa24.22■■□□□ 1.47
LSM6-202ENST00000502781 ADAMTSL2Q86TH1 951 aa24.22■■□□□ 1.47
LSM6-202ENST00000502781 KDF1Q8NAX2 398 aaPredicted RBP24.22■■□□□ 1.47
LSM6-202ENST00000502781 USP7Q93009 1102 aa24.22■■□□□ 1.47
LSM6-202ENST00000502781 PMEPA1Q969W9 287 aa24.22■■□□□ 1.47
LSM6-202ENST00000502781 SNX15Q9NRS6 342 aa24.22■■□□□ 1.47
LSM6-202ENST00000502781 SLC39A1Q9NY26 324 aa24.22■■□□□ 1.47
LSM6-202ENST00000502781 ACSL6Q9UKU0 697 aa24.22■■□□□ 1.47
LSM6-202ENST00000502781 KLK4Q9Y5K2 254 aa24.22■■□□□ 1.47
LSM6-202ENST00000502781 WDFY3Q8IZQ1 3526 aa24.21■■□□□ 1.47
LSM6-202ENST00000502781 NPEPPSL1A6NEC2 478 aa24.21■■□□□ 1.47
LSM6-202ENST00000502781 KRT38O76015 456 aa24.21■■□□□ 1.47
LSM6-202ENST00000502781 C2P06681 752 aa24.21■■□□□ 1.47
LSM6-202ENST00000502781 HIST1H2AGP0C0S8 130 aaPredicted RBP24.21■■□□□ 1.47
LSM6-202ENST00000502781 FOLR1P15328 257 aa24.21■■□□□ 1.47
LSM6-202ENST00000502781 HIST1H2ADP20671 130 aa24.21■■□□□ 1.47
LSM6-202ENST00000502781 ZIC1Q15915 447 aa24.21■■□□□ 1.47
LSM6-202ENST00000502781 ZXDCQ2QGD7 858 aaPredicted RBP24.21■■□□□ 1.47
LSM6-202ENST00000502781 MBOAT1Q6ZNC8 495 aa24.21■■□□□ 1.47
LSM6-202ENST00000502781 TAOK1Q7L7X3 1001 aa24.21■■□□□ 1.47
LSM6-202ENST00000502781 SYTL1Q8IYJ3 562 aa24.21■■□□□ 1.47
LSM6-202ENST00000502781 SPATA6LQ8N4H0 392 aa24.21■■□□□ 1.47
LSM6-202ENST00000502781 HIST1H2AHQ96KK5 128 aa24.21■■□□□ 1.47
LSM6-202ENST00000502781 HIST1H2AJQ99878 128 aa24.21■■□□□ 1.47
LSM6-202ENST00000502781 H2AFJQ9BTM1 129 aa24.21■■□□□ 1.47
LSM6-202ENST00000502781 TRIM54Q9BYV2 358 aa24.21■■□□□ 1.47
LSM6-202ENST00000502781 CTNNAL1Q9UBT7 734 aa24.21■■□□□ 1.47
LSM6-202ENST00000502781 FREM2Q5SZK8 3169 aa24.2■■□□□ 1.47
LSM6-202ENST00000502781 PSMB5P28074 263 aa24.2■■□□□ 1.46
LSM6-202ENST00000502781 SLC5A2P31639 672 aa24.2■■□□□ 1.46
LSM6-202ENST00000502781 GMPRP36959 345 aa24.2■■□□□ 1.46
LSM6-202ENST00000502781 SERPINB8P50452 374 aa24.2■■□□□ 1.46
LSM6-202ENST00000502781 CDKL1Q00532 357 aa24.2■■□□□ 1.46
LSM6-202ENST00000502781 DLG1Q12959 904 aa24.2■■□□□ 1.46
LSM6-202ENST00000502781 KCNAB1Q14722 419 aa24.2■■□□□ 1.46
LSM6-202ENST00000502781 TSNQ15631 228 aaKnown RBP24.2■■□□□ 1.46
LSM6-202ENST00000502781 AGTRAPQ6RW13 159 aa24.2■■□□□ 1.46
LSM6-202ENST00000502781 RAPH1Q70E73 1250 aa24.2■■□□□ 1.46
LSM6-202ENST00000502781 FAM20CQ8IXL6 584 aa24.2■■□□□ 1.46
LSM6-202ENST00000502781 C19orf47Q8N9M1 422 aaKnown RBP24.2■■□□□ 1.46
LSM6-202ENST00000502781 PPFIBP2Q8ND30 876 aa24.2■■□□□ 1.46
LSM6-202ENST00000502781 UBLCP1Q8WVY7 318 aaPredicted RBP24.2■■□□□ 1.46
LSM6-202ENST00000502781 ASPSCR1Q9BZE9 553 aa24.2■■□□□ 1.46
LSM6-202ENST00000502781 APMAPQ9HDC9 416 aa24.2■■□□□ 1.46
LSM6-202ENST00000502781 IGSF5Q9NSI5 407 aa24.2■■□□□ 1.46
LSM6-202ENST00000502781 ARL15Q9NXU5 204 aa24.2■■□□□ 1.46
LSM6-202ENST00000502781 ACOT9Q9Y305 439 aa24.2■■□□□ 1.46
LSM6-202ENST00000502781 OARD1Q9Y530 152 aa24.2■■□□□ 1.46
LSM6-202ENST00000502781 B3GALT1Q9Y5Z6 326 aa24.2■■□□□ 1.46
LSM6-202ENST00000502781 PRAMEF10O60809 474 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 EBLN1P0CF75 366 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 TYK2P29597 1187 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 ARL4DP49703 201 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 ACY1Q03154 408 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 CSHL1Q14406 222 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 IL11RAQ14626 422 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 SF1Q15637 639 aaKnown RBP24.19■■□□□ 1.46
LSM6-202ENST00000502781 TMEM164Q5U3C3 297 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 KIAA1614Q5VZ46 1190 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 SUSD1Q6UWL2 747 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 CENPLQ8N0S6 344 aaPredicted RBP24.19■■□□□ 1.46
LSM6-202ENST00000502781 OR2L3Q8NG85 312 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 SNIP1Q8TAD8 396 aaKnown RBP24.19■■□□□ 1.46
LSM6-202ENST00000502781 FGF11Q92914 225 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 CAVIN3Q969G5 261 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 KIAA1191Q96A73 305 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms