RNA–Protein interactions for RNA: ENST00000498607.2

SCG5-209, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 853 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-209ENST00000498607 CCNT2O60583 730 aaKnown RBP11.3□□□□□ -0.6
SCG5-209ENST00000498607 EDF1O60869 148 aaKnown RBP11.3□□□□□ -0.6
SCG5-209ENST00000498607 LYPLA1O75608 230 aaPredicted RBP11.3□□□□□ -0.6
SCG5-209ENST00000498607 WDR47O94967 919 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 HSPA4LO95757 839 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 MLYCDO95822 493 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 VIPP01282 170 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 VIMP08670 466 aaKnown RBP11.3□□□□□ -0.6
SCG5-209ENST00000498607 CCND1P24385 295 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 ARRB2P32121 409 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 SHMT2P34897 504 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 CCT8P50990 548 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 RAB28P51157 221 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 CLCQ05315 142 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 GALNT1Q10472 559 aaPredicted RBP11.3□□□□□ -0.6
SCG5-209ENST00000498607 TCF15Q12870 199 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 BNIP3Q12983 259 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 GTF2H2Q13888 395 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 DEFB133Q30KQ1 61 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 ARL13AQ5H913 290 aaPredicted RBP11.3□□□□□ -0.6
SCG5-209ENST00000498607 GTF2H2CQ6P1K8 395 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 FAM47EQ6ZV65 393 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 RPS27LQ71UM5 84 aaKnown RBP11.3□□□□□ -0.6
SCG5-209ENST00000498607 SLC9B2Q86UD5 537 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 C17orf82Q86X59 251 aaPredicted RBP11.3□□□□□ -0.6
SCG5-209ENST00000498607 LRRC56Q8IYG6 542 aaPredicted RBP11.3□□□□□ -0.6
SCG5-209ENST00000498607 LRRC34Q8IZ02 419 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 LSMEM2Q8N112 164 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 SLC25A45Q8N413 288 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 TEX9Q8N6V9 391 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 SUMF1Q8NBK3 374 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 OR2L8Q8NGY9 312 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 HMGCLL1Q8TB92 370 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 SMPDL3AQ92484 453 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 NSUN5Q96P11 429 aaKnown RBP11.3□□□□□ -0.6
SCG5-209ENST00000498607 IL17FQ96PD4 163 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 SGPP1Q9BX95 441 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 PITPNM3Q9BZ71 974 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 ATG10Q9H0Y0 220 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 IRF2BPLQ9H1B7 796 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 GAREM1Q9H706 876 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 SLC40A1Q9NP59 571 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 SLCO1B3Q9NPD5 702 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 CCDC177Q9NQR7 707 aaPredicted RBP11.3□□□□□ -0.6
SCG5-209ENST00000498607 FSCN3Q9NQT6 498 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 ACSS2Q9NR19 701 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 DNAJC11Q9NVH1 559 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 ICKQ9UPZ9 632 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 STK38LQ9Y2H1 464 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 ANGPTL3Q9Y5C1 460 aa11.3□□□□□ -0.6
SCG5-209ENST00000498607 GOLGA4Q13439 2230 aaKnown RBP11.29□□□□□ -0.6
SCG5-209ENST00000498607 TRBV23OR9-2A0A075B6M9 112 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 PRAMEF33A0A0G2JMD5 474 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 FAM221BA6H8Z2 402 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 GMNCA6NCL1 334 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 E7ENX8 843 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 KHNYNO15037 678 aaKnown RBP11.29□□□□□ -0.6
SCG5-209ENST00000498607 KATNA1O75449 491 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 CHRNGP07510 517 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 RETP07949 1114 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 EPB42P16452 691 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 GDF5P43026 501 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 CCR10P46092 362 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 FASLGP48023 281 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 CDH13P55290 713 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 MAZP56270 477 aaKnown RBP11.29□□□□□ -0.6
SCG5-209ENST00000498607 TBPL1P62380 186 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 HHEXQ03014 270 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 TAP2Q03519 686 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 LCP2Q13094 533 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 C14orf28Q4W4Y0 310 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 PLA2G2CQ5R387 149 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.29□□□□□ -0.6
SCG5-209ENST00000498607 CAPN13Q6MZZ7 669 aaPredicted RBP11.29□□□□□ -0.6
SCG5-209ENST00000498607 THSD4Q6ZMP0 1018 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 GOLGA7Q7Z5G4 137 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 THOC6Q86W42 341 aaKnown RBP11.29□□□□□ -0.6
SCG5-209ENST00000498607 SFTPA2Q8IWL1 248 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 KIRREL3Q8IZU9 778 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 SNX31Q8N9S9 440 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 KYQ8NBH2 561 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 PPFIBP2Q8ND30 876 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 GPR156Q8NFN8 814 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 SAP25Q8TEE9 199 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 LCN9Q8WX39 176 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 PYCR2Q96C36 320 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 MOCOSQ96EN8 888 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 MED8Q96G25 268 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 ZNF382Q96SR6 550 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 SORT1Q99523 831 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 C20orf27Q9GZN8 174 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 NSRP1Q9H0G5 558 aaKnown RBP11.29□□□□□ -0.6
SCG5-209ENST00000498607 EPN3Q9H201 632 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 STN1Q9H668 368 aaKnown RBP11.29□□□□□ -0.6
SCG5-209ENST00000498607 ZNF395Q9H8N7 513 aaPredicted RBP11.29□□□□□ -0.6
SCG5-209ENST00000498607 UCK1Q9HA47 277 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 IL21RQ9HBE5 538 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 EML4Q9HC35 981 aaKnown RBP11.29□□□□□ -0.6
SCG5-209ENST00000498607 ZBTB26Q9HCK0 441 aa11.29□□□□□ -0.6
SCG5-209ENST00000498607 SEMA4BQ9NPR2 832 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms