RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 TPD52L3Q96J77 140 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 PRMT6Q96LA8 375 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-224ENST00000497488 CDK5RAP1Q96SZ6 601 aaKnown RBP5.86□□□□□ -1.47
BRCA1-224ENST00000497488 RAD9AQ99638 391 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 GFI1Q99684 422 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 C16orf70Q9BSU1 422 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 VCX2Q9H322 139 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 CATSPERBQ9H7T0 1116 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 DNAJC4Q9NNZ3 241 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 ZFP64Q9NPA5 681 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 AKIP1Q9NQ31 210 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 PIGVQ9NUD9 493 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 TCP11L1Q9NUJ3 509 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 GDAP2Q9NXN4 497 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 ZMAT5Q9UDW3 170 aaKnown RBP5.86□□□□□ -1.47
BRCA1-224ENST00000497488 PLEKHB1Q9UF11 243 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-224ENST00000497488 PSME2Q9UL46 239 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 MGAT4BQ9UQ53 548 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 TRAF3IP3Q9Y228 551 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 IRAK3Q9Y616 596 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 SLC30A1Q9Y6M5 507 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 STON1Q9Y6Q2 735 aa5.86□□□□□ -1.47
BRCA1-224ENST00000497488 NEURL4Q96JN8 1562 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 UGGT1Q9NYU2 1555 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 NOS1P29475 1434 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 KANK1Q14678 1352 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 A0A0U1RQJ8 604 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 GOLGA6L7A0A1B0GV03 622 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 MFSD2BA6NFX1 497 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 H0YIZ8 118 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 RNASET2O00584 256 aaKnown RBP5.85□□□□□ -1.47
BRCA1-224ENST00000497488 XPO1O14980 1071 aaKnown RBP5.85□□□□□ -1.47
BRCA1-224ENST00000497488 CACNG3O60359 315 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 TBX19O60806 448 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 NEURL1O76050 574 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 RGS11O94810 467 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 SLITRK3O94933 977 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 IQCF3P0C7M6 154 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 CLUP10909 449 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 BMP5P22003 454 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 PIK3R1P27986 724 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 CHATP28329 748 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 PRDX6P30041 224 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 CDX1P47902 265 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-224ENST00000497488 METAP2P50579 478 aaKnown RBP eCLIP5.85□□□□□ -1.47
BRCA1-224ENST00000497488 PRRX1P54821 245 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 TXNRD1Q16881 649 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 PLAC9Q5JTB6 97 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 C1orf185Q5T7R7 199 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 TMEM65Q6PI78 240 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 VSTM1Q6UX27 236 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 FAM124AQ86V42 546 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 ZC3HC1Q86WB0 502 aaKnown RBP5.85□□□□□ -1.47
BRCA1-224ENST00000497488 SPATA2LQ8IUW3 424 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-224ENST00000497488 C1orf87Q8N0U7 546 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 SPATA6LQ8N4H0 392 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 LINC01356Q8N9X3 169 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 MINDY2Q8NBR6 621 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 SCCPDHQ8NBX0 429 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 OIT3Q8WWZ8 545 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 FBXO32Q969P5 355 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 AZIN2Q96A70 460 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 STAMBPL1Q96FJ0 436 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 SLC22A12Q96S37 553 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 MYADMQ96S97 322 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 PLIN2Q99541 437 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 TBC1D10AQ9BXI6 508 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 KLC2Q9H0B6 622 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 SIRPDQ9H106 197 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 MEGF9Q9H1U4 602 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 DPAGT1Q9H3H5 408 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 ESRP2Q9H6T0 727 aaKnown RBP5.85□□□□□ -1.47
BRCA1-224ENST00000497488 SERTAD4Q9NUC0 356 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 CISD1Q9NZ45 108 aaKnown RBP5.85□□□□□ -1.47
BRCA1-224ENST00000497488 ARPP21Q9UBL0 812 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-224ENST00000497488 ACSL5Q9ULC5 683 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 KCNJ14Q9UNX9 436 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 IQGAP3Q86VI3 1631 aa5.85□□□□□ -1.47
BRCA1-224ENST00000497488 PTPRTO14522 1441 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 XDHP47989 1333 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 MROH5Q6ZUA9 1318 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 C17orf102A2RUQ5 167 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 RRHO14718 337 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 MAPK13O15264 365 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 YY2O15391 372 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 BUB1O43683 1085 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 OR10H2O60403 315 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 SAGP10523 405 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-224ENST00000497488 HSPA8P11142 646 aaKnown RBP5.84□□□□□ -1.47
BRCA1-224ENST00000497488 UNGP13051 313 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-224ENST00000497488 HRH2P25021 359 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 DDX6P26196 483 aaKnown RBP eCLIP5.84□□□□□ -1.47
BRCA1-224ENST00000497488 ALDH4A1P30038 563 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 HSD17B3P37058 310 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 CD151P48509 253 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 ETV1P50549 477 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 PLCD1P51178 756 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 ACTR3P61158 418 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 PPP2CBP62714 309 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 PPP2CAP67775 309 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms