RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 ADAMTS20P59510 1910 aa13.52□□□□□ -0.25
ATPAF2-208ENST00000496852 WDR87Q6ZQQ6 2873 aa13.52□□□□□ -0.25
ATPAF2-208ENST00000496852 A0A1W2PPV9 198 aa13.51□□□□□ -0.25
ATPAF2-208ENST00000496852 EME2A4GXA9 379 aaPredicted RBP13.51□□□□□ -0.25
ATPAF2-208ENST00000496852 ZNF839A8K0R7 811 aa13.51□□□□□ -0.25
ATPAF2-208ENST00000496852 RHPN2P1A8MT19 583 aa13.51□□□□□ -0.25
ATPAF2-208ENST00000496852 SIX3O95343 332 aaPredicted RBP13.51□□□□□ -0.25
ATPAF2-208ENST00000496852 CKMT1AP12532 417 aa13.51□□□□□ -0.25
ATPAF2-208ENST00000496852 PNLIPP16233 465 aa13.51□□□□□ -0.25
ATPAF2-208ENST00000496852 BGNP21810 368 aa13.51□□□□□ -0.25
ATPAF2-208ENST00000496852 HSPA7P48741 367 aa13.51□□□□□ -0.25
ATPAF2-208ENST00000496852 DNAJB13P59910 316 aa13.51□□□□□ -0.25
ATPAF2-208ENST00000496852 BIRC2Q13490 618 aa13.51□□□□□ -0.25
ATPAF2-208ENST00000496852 PTCHD3Q3KNS1 767 aa13.51□□□□□ -0.25
ATPAF2-208ENST00000496852 LIPMQ5VYY2 423 aa13.51□□□□□ -0.25
ATPAF2-208ENST00000496852 OR4E2Q8NGC2 313 aa13.51□□□□□ -0.25
ATPAF2-208ENST00000496852 BAHD1Q8TBE0 780 aaPredicted RBP13.51□□□□□ -0.25
ATPAF2-208ENST00000496852 RHBDD1Q8TEB9 315 aa13.51□□□□□ -0.25
ATPAF2-208ENST00000496852 CKAP2Q8WWK9 683 aa13.51□□□□□ -0.25
ATPAF2-208ENST00000496852 L3HYPDHQ96EM0 354 aa13.51□□□□□ -0.25
ATPAF2-208ENST00000496852 SLC38A3Q99624 504 aa13.51□□□□□ -0.25
ATPAF2-208ENST00000496852 CD244Q9BZW8 370 aa13.51□□□□□ -0.25
ATPAF2-208ENST00000496852 SRMSQ9H3Y6 488 aa13.51□□□□□ -0.25
ATPAF2-208ENST00000496852 OR6C2Q9NZP2 312 aa13.51□□□□□ -0.25
ATPAF2-208ENST00000496852 LRRC14BA6NHZ5 514 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 BTN3A3O00478 584 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 PRICKLE3O43900 615 aaPredicted RBP13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 TRIM13O60858 407 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 RPS17P08708 135 aaKnown RBP13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 FGF3P11487 239 aaPredicted RBP13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 IMPDH1P20839 514 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 EEF1DP29692 281 aaKnown RBP13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 GDF5P43026 501 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 GPR3P46089 330 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 EPHA4P54764 986 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 TBPL1P62380 186 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 HERVK_113P63132 956 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 NAE1Q13564 534 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 CHI3L2Q15782 390 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 ZNF678Q5SXM1 525 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 METTL2BQ6P1Q9 378 aaKnown RBP13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 GUSBP11Q6P575 273 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 ZCCHC23Q6ZST2 131 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 NAXDQ8IW45 347 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 TRIM42Q8IWZ5 723 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 ADGRF3Q8IZF5 1079 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 OR6Y1Q8NGX8 325 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 SETD7Q8WTS6 366 aaKnown RBP13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 SMPDL3AQ92484 453 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 PYCR2Q96C36 320 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 MAGEB18Q96M61 343 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 SGPP1Q9BX95 441 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 ERVK-6Q9BXR3 956 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 MANSC1Q9H8J5 431 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 INTS7Q9NVH2 962 aaKnown RBP13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 TNPO3Q9Y5L0 923 aaKnown RBP13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 RIF1Q5UIP0 2472 aaKnown RBP13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 E2F3O00716 465 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 SH3BP5O60239 455 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 CBFA2T3O75081 653 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 STK16O75716 305 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 LDOC1O95751 146 aaPredicted RBP13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 VIMP08670 466 aaKnown RBP13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 CHRM5P08912 532 aaPredicted RBP13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 PEBP1P30086 187 aaKnown RBP13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 UNC50Q53HI1 259 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 PERM1Q5SV97 790 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 STPG1Q5TH74 334 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 SUSD1Q6UWL2 747 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 LRRC70Q7Z2Q7 622 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 RAB44Q7Z6P3 723 aaPredicted RBP13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 C2orf73Q8N5S3 287 aaPredicted RBP13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 RSC1A1Q92681 617 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 NAT6Q93015 286 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 CCDC74AQ96AQ1 378 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 CNDP2Q96KP4 475 aaKnown RBP13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 GATA5Q9BWX5 397 aaPredicted RBP13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 SLC32A1Q9H598 525 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 RABEP2Q9H5N1 569 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 CCDC177Q9NQR7 707 aaPredicted RBP13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 ACSS2Q9NR19 701 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 PCTPQ9UKL6 214 aa13.5□□□□□ -0.25
ATPAF2-208ENST00000496852 CPED1A4D0V7 1026 aa13.49□□□□□ -0.25
ATPAF2-208ENST00000496852 OR6C74A6NCV1 312 aa13.49□□□□□ -0.25
ATPAF2-208ENST00000496852 TCP11X1B4DZS4 312 aa13.49□□□□□ -0.25
ATPAF2-208ENST00000496852 K7EPI3 171 aa13.49□□□□□ -0.25
ATPAF2-208ENST00000496852 UBXN7O94888 489 aa13.49□□□□□ -0.25
ATPAF2-208ENST00000496852 WDR47O94967 919 aa13.49□□□□□ -0.25
ATPAF2-208ENST00000496852 CCND1P24385 295 aa13.49□□□□□ -0.25
ATPAF2-208ENST00000496852 DUSP3P51452 185 aaPredicted RBP13.49□□□□□ -0.25
ATPAF2-208ENST00000496852 NAGLUP54802 743 aa13.49□□□□□ -0.25
ATPAF2-208ENST00000496852 DAB2P98082 770 aa13.49□□□□□ -0.25
ATPAF2-208ENST00000496852 PDK4Q16654 411 aa13.49□□□□□ -0.25
ATPAF2-208ENST00000496852 TUBB8Q3ZCM7 444 aa13.49□□□□□ -0.25
ATPAF2-208ENST00000496852 ATG16L1Q676U5 607 aa13.49□□□□□ -0.25
ATPAF2-208ENST00000496852 CAPN13Q6MZZ7 669 aaPredicted RBP13.49□□□□□ -0.25
ATPAF2-208ENST00000496852 SPRED1Q7Z699 444 aa13.49□□□□□ -0.25
ATPAF2-208ENST00000496852 THOC6Q86W42 341 aaKnown RBP13.49□□□□□ -0.25
ATPAF2-208ENST00000496852 CCNYL1Q8N7R7 359 aa13.49□□□□□ -0.25
ATPAF2-208ENST00000496852 FLVCR1-AS1Q8TAF5 88 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms