RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 TSTA3Q13630 321 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-246ENST00000496569 LONRF1Q17RB8 773 aa11.75□□□□□ -0.53
HDLBP-246ENST00000496569 RBM20Q5T481 1227 aaKnown RBP11.75□□□□□ -0.53
HDLBP-246ENST00000496569 RNF187Q5TA31 235 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-246ENST00000496569 PAPD7Q5XG87 772 aaKnown RBP11.75□□□□□ -0.53
HDLBP-246ENST00000496569 SUSD1Q6UWL2 747 aa11.75□□□□□ -0.53
HDLBP-246ENST00000496569 ZNF517Q6ZMY9 492 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-246ENST00000496569 KCNMB4Q86W47 210 aa11.75□□□□□ -0.53
HDLBP-246ENST00000496569 BPHLQ86WA6 291 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-246ENST00000496569 CPNE9Q8IYJ1 553 aa11.75□□□□□ -0.53
HDLBP-246ENST00000496569 DNAJC22Q8N4W6 341 aa11.75□□□□□ -0.53
HDLBP-246ENST00000496569 METTL27Q8N6F8 245 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-246ENST00000496569 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.75□□□□□ -0.53
HDLBP-246ENST00000496569 PPFIBP2Q8ND30 876 aa11.75□□□□□ -0.53
HDLBP-246ENST00000496569 OR8K5Q8NH50 307 aa11.75□□□□□ -0.53
HDLBP-246ENST00000496569 CFAP36Q96G28 342 aa11.75□□□□□ -0.53
HDLBP-246ENST00000496569 CATSPER2Q96P56 530 aa11.75□□□□□ -0.53
HDLBP-246ENST00000496569 TCF12Q99081 682 aa11.75□□□□□ -0.53
HDLBP-246ENST00000496569 GPR21Q99679 349 aa11.75□□□□□ -0.53
HDLBP-246ENST00000496569 ABCF3Q9NUQ8 709 aa11.75□□□□□ -0.53
HDLBP-246ENST00000496569 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-246ENST00000496569 FBXO5Q9UKT4 447 aa11.75□□□□□ -0.53
HDLBP-246ENST00000496569 CHMP2BQ9UQN3 213 aa11.75□□□□□ -0.53
HDLBP-246ENST00000496569 POLHQ9Y253 713 aa11.75□□□□□ -0.53
HDLBP-246ENST00000496569 FARSAQ9Y285 508 aaKnown RBP11.75□□□□□ -0.53
HDLBP-246ENST00000496569 TP53TG5Q9Y2B4 290 aa11.75□□□□□ -0.53
HDLBP-246ENST00000496569 MAN2B2Q9Y2E5 1009 aa11.75□□□□□ -0.53
HDLBP-246ENST00000496569 PCDHGA6Q9Y5G7 932 aa11.75□□□□□ -0.53
HDLBP-246ENST00000496569 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.75□□□□□ -0.53
HDLBP-246ENST00000496569 MYO18BQ8IUG5 2567 aa11.75□□□□□ -0.53
HDLBP-246ENST00000496569 ARGFXA6NJG6 315 aa11.74□□□□□ -0.53
HDLBP-246ENST00000496569 MASP2O00187 686 aa11.74□□□□□ -0.53
HDLBP-246ENST00000496569 CTSVO60911 334 aa11.74□□□□□ -0.53
HDLBP-246ENST00000496569 CNOT3O75175 753 aaKnown RBP11.74□□□□□ -0.53
HDLBP-246ENST00000496569 PDGFAP04085 211 aa11.74□□□□□ -0.53
HDLBP-246ENST00000496569 RPN2P04844 631 aa11.74□□□□□ -0.53
HDLBP-246ENST00000496569 KLK3P07288 261 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-246ENST00000496569 MSL3P1P0C860 447 aa11.74□□□□□ -0.53
HDLBP-246ENST00000496569 RPS15P62841 145 aaKnown RBP11.74□□□□□ -0.53
HDLBP-246ENST00000496569 SF1Q15637 639 aaKnown RBP11.74□□□□□ -0.53
HDLBP-246ENST00000496569 TRMT10BQ6PF06 316 aaKnown RBP11.74□□□□□ -0.53
HDLBP-246ENST00000496569 FIGLAQ6QHK4 219 aa11.74□□□□□ -0.53
HDLBP-246ENST00000496569 PIWIL4Q7Z3Z4 852 aaKnown RBP11.74□□□□□ -0.53
HDLBP-246ENST00000496569 GPR135Q8IZ08 494 aa11.74□□□□□ -0.53
HDLBP-246ENST00000496569 C9orf43Q8TAL5 461 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-246ENST00000496569 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-246ENST00000496569 APOBEC4Q8WW27 367 aaKnown RBP11.74□□□□□ -0.53
HDLBP-246ENST00000496569 ANP32BQ92688 251 aaKnown RBP11.74□□□□□ -0.53
HDLBP-246ENST00000496569 RAD51AP1Q96B01 352 aa11.74□□□□□ -0.53
HDLBP-246ENST00000496569 ABHD17AQ96GS6 310 aa11.74□□□□□ -0.53
HDLBP-246ENST00000496569 TCTN2Q96GX1 697 aa11.74□□□□□ -0.53
HDLBP-246ENST00000496569 FAM117AQ9C073 453 aa11.74□□□□□ -0.53
HDLBP-246ENST00000496569 SLC25A18Q9H1K4 315 aa11.74□□□□□ -0.53
HDLBP-246ENST00000496569 SYNPO2LQ9H987 977 aa11.74□□□□□ -0.53
HDLBP-246ENST00000496569 SLC6A20Q9NP91 592 aa11.74□□□□□ -0.53
HDLBP-246ENST00000496569 INTS10Q9NVR2 710 aaKnown RBP11.74□□□□□ -0.53
HDLBP-246ENST00000496569 EURLQ9NYK6 297 aa11.74□□□□□ -0.53
HDLBP-246ENST00000496569 STOX2Q9P2F5 926 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-246ENST00000496569 PCYOX1Q9UHG3 505 aa11.74□□□□□ -0.53
HDLBP-246ENST00000496569 SERTAD3Q9UJW9 196 aa11.74□□□□□ -0.53
HDLBP-246ENST00000496569 HEMK1Q9Y5R4 338 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-246ENST00000496569 FAM169AQ9Y6X4 670 aa11.74□□□□□ -0.53
HDLBP-246ENST00000496569 ASH1LQ9NR48 2969 aaKnown RBP11.74□□□□□ -0.53
HDLBP-246ENST00000496569 H3BMM5 538 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 KPNA5O15131 536 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 ZSCAN9O15535 394 aaPredicted RBP11.73□□□□□ -0.53
HDLBP-246ENST00000496569 MAP3K7O43318 606 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 KDM1AO60341 852 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 MED26O95402 600 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 MATN4O95460 622 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 PGAM1P18669 254 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 ITGAXP20702 1163 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 GABRB3P28472 473 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 ELK3P41970 407 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 ITGA8P53708 1063 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 ADARP55265 1226 aaKnown RBP11.73□□□□□ -0.53
HDLBP-246ENST00000496569 TIAL1Q01085 375 aaKnown RBP eCLIP11.73□□□□□ -0.53
HDLBP-246ENST00000496569 DR1Q01658 176 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 FASTKD3Q14CZ7 662 aaKnown RBP11.73□□□□□ -0.53
HDLBP-246ENST00000496569 MLIPQ5VWP3 458 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 FRMPD2BQ6IN97 320 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 TTC23LQ6PF05 361 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 MBOAT1Q6ZNC8 495 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 ANKMY2Q8IV38 441 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 CD200R1Q8TD46 325 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 SLCO2A1Q92959 643 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 FOPNLQ96NB1 174 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 LRFN5Q96NI6 719 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 GBP5Q96PP8 586 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 KRT12Q99456 494 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 PKP4Q99569 1192 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 EBNA1BP2Q99848 306 aaKnown RBP11.73□□□□□ -0.53
HDLBP-246ENST00000496569 AARSD1Q9BTE6 412 aaKnown RBP11.73□□□□□ -0.53
HDLBP-246ENST00000496569 SYTL2Q9HCH5 934 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 TCFL5Q9UL49 500 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 SNX7Q9UNH6 387 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 PLCL2Q9UPR0 1127 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 SAR1BQ9Y6B6 198 aa11.73□□□□□ -0.53
HDLBP-246ENST00000496569 A0A0J9YVX5 310 aa11.72□□□□□ -0.53
HDLBP-246ENST00000496569 MAGEB16A2A368 324 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms