RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 ZSWIM3Q96MP5 696 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 NTMT1Q9BV86 223 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 CCDC90BQ9GZT6 254 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 EPB41L1Q9H4G0 881 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 FAM83DQ9H4H8 585 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 CXorf21Q9HAI6 301 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 IFT80Q9P2H3 777 aaPredicted RBP11.23□□□□□ -0.61
CDCA7-208ENST00000496441 KNL1Q8NG31 2342 aa11.23□□□□□ -0.61
CDCA7-208ENST00000496441 hCG_2039718K7EN88 272 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 UPK1AO00322 258 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 RFXANKO14593 260 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 GRM6O15303 877 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 TSPAN6O43657 245 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 IL6P05231 212 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 SDC1P18827 310 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 MSH3P20585 1137 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 AOAHP28039 575 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 CTSCP53634 463 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 NAA20P61599 178 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 NAE1Q13564 534 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 C16orf72Q14CZ0 275 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 MEP1AQ16819 746 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 SYTL3Q4VX76 610 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 CES5AQ6NT32 575 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 ZCCHC8Q6NZY4 707 aaKnown RBP11.22□□□□□ -0.61
CDCA7-208ENST00000496441 RIMKLAQ8IXN7 391 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 CLECL1Q8IZS7 167 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 BPIFB1Q8TDL5 484 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 C12orf43Q96C57 262 aaKnown RBP11.22□□□□□ -0.61
CDCA7-208ENST00000496441 PANX1Q96RD7 426 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 CLMPQ9H6B4 373 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 SPTBN5Q9NRC6 3674 aaKnown RBP11.22□□□□□ -0.61
CDCA7-208ENST00000496441 E7EQ34 232 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 ARNTLO00327 626 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 KPNA3O00505 521 aaPredicted RBP11.22□□□□□ -0.61
CDCA7-208ENST00000496441 CREG1O75629 220 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 GNRH1P01148 92 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 CLTBP09497 229 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 PDHA2P29803 388 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 SLC7A9P82251 487 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 MAD2L1Q13257 205 aaPredicted RBP11.22□□□□□ -0.61
CDCA7-208ENST00000496441 NUMA1Q14980 2115 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 PON2Q15165 354 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 LYPLAL1Q5VWZ2 237 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 PATL1Q86TB9 770 aaKnown RBP11.22□□□□□ -0.61
CDCA7-208ENST00000496441 SYT12Q8IV01 421 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 PACRGLQ8N7B6 248 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 BPIFB6Q8NFQ5 453 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 MCOLN3Q8TDD5 553 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 ISOC1Q96CN7 298 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 ZFYVE19Q96K21 471 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 DGCR6LQ9BY27 220 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 HSFX1Q9UBD0 423 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 TBX21Q9UL17 535 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 OGDHLQ9ULD0 1010 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 SNX6Q9UNH7 406 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 SCN8AQ9UQD0 1980 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 SPEGQ15772 3267 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 ANTXRLA6NF34 631 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 FADS2P1A8MWK0 482 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 MITFO75030 526 aaPredicted RBP11.22□□□□□ -0.61
CDCA7-208ENST00000496441 LATS1O95835 1130 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 THRBP10828 461 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 PFKLP17858 780 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 AGXTP21549 392 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 CALRP27797 417 aaKnown RBP11.22□□□□□ -0.61
CDCA7-208ENST00000496441 MAP4P27816 1152 aaKnown RBP11.22□□□□□ -0.61
CDCA7-208ENST00000496441 GALK1P51570 392 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 MEF2AQ02078 507 aaPredicted RBP11.22□□□□□ -0.61
CDCA7-208ENST00000496441 MESP2Q0VG99 397 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 COL9A2Q14055 689 aaPredicted RBP11.22□□□□□ -0.61
CDCA7-208ENST00000496441 DAG1Q14118 895 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 RAB39AQ14964 217 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 ARHGEF6Q15052 776 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 ACOX1Q15067 660 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 TRIM46Q7Z4K8 759 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 GPR180Q86V85 440 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 ASB11Q8WXH4 323 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 BARD1Q99728 777 aaKnown RBP11.22□□□□□ -0.61
CDCA7-208ENST00000496441 NPLQ9BXD5 320 aaPredicted RBP11.22□□□□□ -0.61
CDCA7-208ENST00000496441 REXO4Q9GZR2 422 aaKnown RBP11.22□□□□□ -0.61
CDCA7-208ENST00000496441 TDP1Q9NUW8 608 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 TRPS1Q9UHF7 1281 aa11.22□□□□□ -0.61
CDCA7-208ENST00000496441 CCDC88CQ9P219 2028 aa11.21□□□□□ -0.61
CDCA7-208ENST00000496441 A0A1W2PPW3 197 aa11.21□□□□□ -0.61
CDCA7-208ENST00000496441 TRIM43BA6NCK2 446 aa11.21□□□□□ -0.61
CDCA7-208ENST00000496441 H0Y858 1186 aa11.21□□□□□ -0.61
CDCA7-208ENST00000496441 FKBP9O95302 570 aa11.21□□□□□ -0.61
CDCA7-208ENST00000496441 ZBTB11O95625 1053 aaPredicted RBP11.21□□□□□ -0.61
CDCA7-208ENST00000496441 ALPLP05186 524 aa11.21□□□□□ -0.61
CDCA7-208ENST00000496441 ADH1AP07327 375 aa11.21□□□□□ -0.61
CDCA7-208ENST00000496441 CDK4P11802 303 aa11.21□□□□□ -0.61
CDCA7-208ENST00000496441 HLA-EP13747 358 aa11.21□□□□□ -0.61
CDCA7-208ENST00000496441 ALDH3B2P48448 385 aa11.21□□□□□ -0.61
CDCA7-208ENST00000496441 SIM2Q14190 667 aaPredicted RBP11.21□□□□□ -0.61
CDCA7-208ENST00000496441 LRRC26Q2I0M4 334 aa11.21□□□□□ -0.61
CDCA7-208ENST00000496441 FRG2Q64ET8 278 aa11.21□□□□□ -0.61
CDCA7-208ENST00000496441 FKBP9P1Q75LS8 142 aa11.21□□□□□ -0.61
CDCA7-208ENST00000496441 VTCN1Q7Z7D3 282 aa11.21□□□□□ -0.61
CDCA7-208ENST00000496441 TNIP2Q8NFZ5 429 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms