RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 EPS8Q12929 822 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 CHIT1Q13231 466 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 DPY19L1Q2PZI1 675 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 ZXDCQ2QGD7 858 aaPredicted RBP10.78□□□□□ -0.68
CMSS1-208ENST00000496116 SYTL3Q4VX76 610 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 PYCR3Q53H96 274 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 LDLRAP1Q5SW96 308 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 OTUD3Q5T2D3 398 aaPredicted RBP10.78□□□□□ -0.68
CMSS1-208ENST00000496116 HENMT1Q5T8I9 393 aaKnown RBP10.78□□□□□ -0.68
CMSS1-208ENST00000496116 TMEM215Q68D42 235 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 GCNT7Q6ZNI0 430 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 MSANTD1Q6ZTZ1 278 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 Q6ZVL8 140 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 CYP2U1Q7Z449 544 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 KIAA0907Q7Z7F0 614 aaPredicted RBP10.78□□□□□ -0.68
CMSS1-208ENST00000496116 GPR180Q86V85 440 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 ZDHHC13Q8IUH4 622 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 MSRB3Q8IXL7 192 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 MICU2Q8IYU8 434 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 FBXO30Q8TB52 745 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 FRS2Q8WU20 508 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 NCLNQ969V3 563 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 TMBIM1Q969X1 311 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 TMEM159Q96B96 161 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 FBXL8Q96CD0 374 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 FAM120BQ96EK7 910 aaKnown RBP10.78□□□□□ -0.68
CMSS1-208ENST00000496116 FBXL20Q96IG2 436 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 PAWRQ96IZ0 340 aaKnown RBP10.78□□□□□ -0.68
CMSS1-208ENST00000496116 TSSK3Q96PN8 268 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 TBCDQ9BTW9 1192 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 YTHDF1Q9BYJ9 559 aaKnown RBP10.78□□□□□ -0.68
CMSS1-208ENST00000496116 PAIP1Q9H074 479 aaKnown RBP10.78□□□□□ -0.68
CMSS1-208ENST00000496116 ATG10Q9H0Y0 220 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 IL23AQ9NPF7 189 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 MBD1Q9UIS9 605 aaPredicted RBP10.78□□□□□ -0.68
CMSS1-208ENST00000496116 PLXNA2O75051 1894 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 TRBV5-3A0A0A0MS03 114 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 OR2AG2A6NM03 316 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 TTC34A8MYJ7 566 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 GNGT2O14610 69 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 SLC9A3R1O14745 358 aaPredicted RBP10.77□□□□□ -0.69
CMSS1-208ENST00000496116 CLGNO14967 610 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 XYLBO75191 536 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 SNAP29O95721 258 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 HPRP00739 348 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 CST1P01037 141 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 PCNAP12004 261 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 AMD1P17707 334 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 SDC1P18827 310 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 ITPKAP23677 461 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 NRIP1P48552 1158 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 HTRA3P83110 453 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 IRF8Q02556 426 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 CSTF3Q12996 717 aaKnown RBP10.77□□□□□ -0.69
CMSS1-208ENST00000496116 DAG1Q14118 895 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 ZNF805Q5CZA5 627 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 ERAP2Q6P179 960 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 GPR141Q7Z602 305 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 RAVER1Q8IY67 606 aaKnown RBP10.77□□□□□ -0.69
CMSS1-208ENST00000496116 NAT16Q8N8M0 369 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 HCAR2Q8TDS4 363 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 ADAMTS16Q8TE57 1224 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 CYB5D2Q8WUJ1 264 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 APOLD1Q96LR9 279 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 RDH12Q96NR8 316 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 RIOK2Q9BVS4 552 aaKnown RBP10.77□□□□□ -0.69
CMSS1-208ENST00000496116 IKZF5Q9H5V7 419 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 NTN4Q9HB63 628 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 DNAJB9Q9UBS3 223 aa10.77□□□□□ -0.69
CMSS1-208ENST00000496116 TRIM64A6NGJ6 449 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 TRIM64CA6NLI5 447 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 G3V2T6 193 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 UPK1AO00322 258 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 AREL1O15033 823 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 PER2O15055 1255 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 ATG13O75143 517 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 CLIC3O95833 236 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 TIMP2P16035 220 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 PRPS1L1P21108 318 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 HOXA9P31269 272 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 CDK9P50750 372 aaKnown RBP10.76□□□□□ -0.69
CMSS1-208ENST00000496116 HNRNPFP52597 415 aaKnown RBP10.76□□□□□ -0.69
CMSS1-208ENST00000496116 CDH15P55291 814 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 PFN3P60673 137 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 ADARB1P78563 741 aaKnown RBP10.76□□□□□ -0.69
CMSS1-208ENST00000496116 ABHD18Q0P651 414 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 PGS1Q32NB8 556 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 TMEM259Q4ZIN3 620 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 ENPP6Q6UWR7 440 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 USP51Q70EK9 711 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 DPPA4Q7L190 304 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 LPCAT2Q7L5N7 544 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 GPR149Q86SP6 731 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 STK32CQ86UX6 486 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 PHACTR4Q8IZ21 702 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 OFCC1Q8IZS5 231 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 SVOPLQ8N434 492 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 BTN2A2Q8WVV5 523 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 APIPQ96GX9 242 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 MRGPRX3Q96LB0 322 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms