RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 RAB11FIP5Q9BXF6 653 aa22.3■■□□□ 1.16
COL27A1-208ENST00000494780 ENAMQ9NRM1 1142 aa22.3■■□□□ 1.16
COL27A1-208ENST00000494780 CATSPERZQ9NTU4 200 aa22.3■■□□□ 1.16
COL27A1-208ENST00000494780 CIDEBQ9UHD4 219 aa22.3■■□□□ 1.16
COL27A1-208ENST00000494780 SLC39A10Q9ULF5 831 aa22.3■■□□□ 1.16
COL27A1-208ENST00000494780 CAPN6Q9Y6Q1 641 aa22.3■■□□□ 1.16
COL27A1-208ENST00000494780 ANKRD12Q6UB98 2062 aa22.3■■□□□ 1.16
COL27A1-208ENST00000494780 TEX15Q9BXT5 2789 aa22.3■■□□□ 1.16
COL27A1-208ENST00000494780 NOTCH2Q04721 2471 aa22.3■■□□□ 1.16
COL27A1-208ENST00000494780 MASP2O00187 686 aa22.29■■□□□ 1.16
COL27A1-208ENST00000494780 DSCR3O14972 297 aa22.29■■□□□ 1.16
COL27A1-208ENST00000494780 ITGA3P26006 1051 aa22.29■■□□□ 1.16
COL27A1-208ENST00000494780 TTPAP49638 278 aa22.29■■□□□ 1.16
COL27A1-208ENST00000494780 GRM7Q14831 915 aa22.29■■□□□ 1.16
COL27A1-208ENST00000494780 SF1Q15637 639 aaKnown RBP22.29■■□□□ 1.16
COL27A1-208ENST00000494780 CRB2Q5IJ48 1285 aa22.29■■□□□ 1.16
COL27A1-208ENST00000494780 FCRL6Q6DN72 434 aa22.29■■□□□ 1.16
COL27A1-208ENST00000494780 TTC23LQ6PF05 361 aa22.29■■□□□ 1.16
COL27A1-208ENST00000494780 FIGLAQ6QHK4 219 aa22.29■■□□□ 1.16
COL27A1-208ENST00000494780 TAX1BP1Q86VP1 789 aa22.29■■□□□ 1.16
COL27A1-208ENST00000494780 KRT222Q8N1A0 295 aa22.29■■□□□ 1.16
COL27A1-208ENST00000494780 C2orf73Q8N5S3 287 aaPredicted RBP22.29■■□□□ 1.16
COL27A1-208ENST00000494780 RNF10Q8N5U6 811 aaKnown RBP22.29■■□□□ 1.16
COL27A1-208ENST00000494780 LMNTD1Q8N9Z9 388 aa22.29■■□□□ 1.16
COL27A1-208ENST00000494780 UBE2Q2Q8WVN8 375 aa22.29■■□□□ 1.16
COL27A1-208ENST00000494780 ZNF285Q96NJ3 590 aa22.29■■□□□ 1.16
COL27A1-208ENST00000494780 RBSNQ9H1K0 784 aa22.29■■□□□ 1.16
COL27A1-208ENST00000494780 SLC26A1Q9H2B4 701 aa22.29■■□□□ 1.16
COL27A1-208ENST00000494780 CUTCQ9NTM9 273 aa22.29■■□□□ 1.16
COL27A1-208ENST00000494780 PCM1Q15154 2024 aa22.28■■□□□ 1.16
COL27A1-208ENST00000494780 WIPF3A6NGB9 483 aa22.28■■□□□ 1.16
COL27A1-208ENST00000494780 APRTP07741 180 aa22.28■■□□□ 1.16
COL27A1-208ENST00000494780 NKG7Q16617 165 aa22.28■■□□□ 1.16
COL27A1-208ENST00000494780 PCID2Q5JVF3 399 aa22.28■■□□□ 1.16
COL27A1-208ENST00000494780 LDB1Q86U70 411 aaPredicted RBP22.28■■□□□ 1.16
COL27A1-208ENST00000494780 SLC13A5Q86YT5 568 aaPredicted RBP22.28■■□□□ 1.16
COL27A1-208ENST00000494780 TTC29Q8NA56 475 aaPredicted RBP22.28■■□□□ 1.16
COL27A1-208ENST00000494780 GSDMBQ8TAX9 411 aa22.28■■□□□ 1.16
COL27A1-208ENST00000494780 C1orf54Q8WWF1 131 aa22.28■■□□□ 1.16
COL27A1-208ENST00000494780 INPP5DQ92835 1189 aa22.28■■□□□ 1.16
COL27A1-208ENST00000494780 ZUFSPQ96AP4 578 aa22.28■■□□□ 1.16
COL27A1-208ENST00000494780 PANX3Q96QZ0 392 aa22.28■■□□□ 1.16
COL27A1-208ENST00000494780 SPSB2Q99619 263 aa22.28■■□□□ 1.16
COL27A1-208ENST00000494780 MRM3Q9HC36 420 aaKnown RBP22.28■■□□□ 1.16
COL27A1-208ENST00000494780 SLC6A20Q9NP91 592 aa22.28■■□□□ 1.16
COL27A1-208ENST00000494780 IL1RAPL1Q9NZN1 696 aa22.28■■□□□ 1.16
COL27A1-208ENST00000494780 PAK5Q9P286 719 aa22.28■■□□□ 1.16
COL27A1-208ENST00000494780 CDC23Q9UJX2 597 aa22.28■■□□□ 1.16
COL27A1-208ENST00000494780 FBXL4Q9UKA2 621 aa22.28■■□□□ 1.16
COL27A1-208ENST00000494780 NXT1Q9UKK6 140 aaKnown RBP22.28■■□□□ 1.16
COL27A1-208ENST00000494780 PCDHGA10Q9Y5H3 936 aa22.28■■□□□ 1.16
COL27A1-208ENST00000494780 MRFAP1Q9Y605 127 aa22.28■■□□□ 1.16
COL27A1-208ENST00000494780 COPG1Q9Y678 874 aaKnown RBP22.28■■□□□ 1.16
COL27A1-208ENST00000494780 A1L4Q6 167 aa22.27■■□□□ 1.16
COL27A1-208ENST00000494780 TARM1B6A8C7 271 aa22.27■■□□□ 1.16
COL27A1-208ENST00000494780 PRICKLE3O43900 615 aaPredicted RBP22.27■■□□□ 1.16
COL27A1-208ENST00000494780 ETS1P14921 441 aa22.27■■□□□ 1.16
COL27A1-208ENST00000494780 GRIA3P42263 894 aa22.27■■□□□ 1.16
COL27A1-208ENST00000494780 DOPEY1Q5JWR5 2465 aa22.27■■□□□ 1.16
COL27A1-208ENST00000494780 NUP210LQ5VU65 1888 aa22.27■■□□□ 1.16
COL27A1-208ENST00000494780 PRAMEF13Q5VWM6 474 aa22.27■■□□□ 1.16
COL27A1-208ENST00000494780 PTRHD1Q6GMV3 140 aaKnown RBP22.27■■□□□ 1.16
COL27A1-208ENST00000494780 PRUNE1Q86TP1 453 aa22.27■■□□□ 1.16
COL27A1-208ENST00000494780 CUZD1Q86UP6 607 aa22.27■■□□□ 1.16
COL27A1-208ENST00000494780 CCDC89Q8N998 374 aa22.27■■□□□ 1.16
COL27A1-208ENST00000494780 RAD51AP1Q96B01 352 aa22.27■■□□□ 1.16
COL27A1-208ENST00000494780 BARD1Q99728 777 aaKnown RBP22.27■■□□□ 1.16
COL27A1-208ENST00000494780 ZBTB20Q9HC78 741 aaPredicted RBP22.27■■□□□ 1.16
COL27A1-208ENST00000494780 CHRAC1Q9NRG0 131 aa22.27■■□□□ 1.16
COL27A1-208ENST00000494780 MARCH4Q9P2E8 410 aaPredicted RBP22.27■■□□□ 1.16
COL27A1-208ENST00000494780 GNPTGQ9UJJ9 305 aa22.27■■□□□ 1.16
COL27A1-208ENST00000494780 ERRFI1Q9UJM3 462 aaPredicted RBP22.27■■□□□ 1.16
COL27A1-208ENST00000494780 FITM1A5D6W6 292 aa22.26■■□□□ 1.15
COL27A1-208ENST00000494780 ANKUB1A6NFN9 424 aa22.26■■□□□ 1.15
COL27A1-208ENST00000494780 SOCS6O14544 535 aa22.26■■□□□ 1.15
COL27A1-208ENST00000494780 KPNA5O15131 536 aa22.26■■□□□ 1.15
COL27A1-208ENST00000494780 CD3EAPO15446 510 aaKnown RBP22.26■■□□□ 1.15
COL27A1-208ENST00000494780 MCM3P25205 808 aa22.26■■□□□ 1.15
COL27A1-208ENST00000494780 GLRBP48167 497 aa22.26■■□□□ 1.15
COL27A1-208ENST00000494780 ELOAQ14241 798 aaKnown RBP22.26■■□□□ 1.15
COL27A1-208ENST00000494780 FAM214AQ32MH5 1076 aa22.26■■□□□ 1.15
COL27A1-208ENST00000494780 COX15Q7KZN9 410 aa22.26■■□□□ 1.15
COL27A1-208ENST00000494780 LRRC6Q86X45 466 aa22.26■■□□□ 1.15
COL27A1-208ENST00000494780 MPP5Q8N3R9 675 aa22.26■■□□□ 1.15
COL27A1-208ENST00000494780 RAB42Q8N4Z0 105 aa22.26■■□□□ 1.15
COL27A1-208ENST00000494780 VPS50Q96JG6 964 aa22.26■■□□□ 1.15
COL27A1-208ENST00000494780 WDR77Q9BQA1 342 aaPredicted RBP22.26■■□□□ 1.15
COL27A1-208ENST00000494780 SELENOSQ9BQE4 189 aa22.26■■□□□ 1.15
COL27A1-208ENST00000494780 P2RY12Q9H244 342 aa22.26■■□□□ 1.15
COL27A1-208ENST00000494780 SLC5A6Q9Y289 635 aa22.26■■□□□ 1.15
COL27A1-208ENST00000494780 SRPX2O60687 465 aaPredicted RBP22.25■■□□□ 1.15
COL27A1-208ENST00000494780 C1orf105O95561 183 aa22.25■■□□□ 1.15
COL27A1-208ENST00000494780 LDLRP01130 860 aa22.25■■□□□ 1.15
COL27A1-208ENST00000494780 RPS3P23396 243 aaKnown RBP eCLIP22.25■■□□□ 1.15
COL27A1-208ENST00000494780 SNX1Q13596 522 aa22.25■■□□□ 1.15
COL27A1-208ENST00000494780 IRAK1BP1Q5VVH5 260 aa22.25■■□□□ 1.15
COL27A1-208ENST00000494780 MAMDC2Q7Z304 686 aaPredicted RBP22.25■■□□□ 1.15
COL27A1-208ENST00000494780 HMGCLL1Q8TB92 370 aa22.25■■□□□ 1.15
COL27A1-208ENST00000494780 PPP4R1Q8TF05 950 aa22.25■■□□□ 1.15
COL27A1-208ENST00000494780 COG1Q8WTW3 980 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms