RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 TATDN3Q17R31 274 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 HACD4Q5VWC8 232 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 ELP2Q6IA86 826 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 HHIPL2Q6UWX4 724 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 LAYNQ6UX15 382 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 TRILQ7L0X0 811 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 HSD17B13Q7Z5P4 300 aaPredicted RBP4.69□□□□□ -1.66
PRKD3-210ENST00000494667 CYP4Z1Q86W10 505 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 CEP97Q8IW35 865 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 ZNF567Q8N184 647 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 AKAP1Q92667 903 aaKnown RBP eCLIP4.69□□□□□ -1.66
PRKD3-210ENST00000494667 TSPAN17Q96FV3 270 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 P2RY11Q96G91 374 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 UROC1Q96N76 676 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 ASB7Q9H672 318 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 ACTR8Q9H981 624 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 PCDHB16Q9NRJ7 776 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 KCNH7Q9NS40 1196 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 TREX1Q9NSU2 369 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 SEC14L4Q9UDX3 406 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 POLG2Q9UHN1 485 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 ZNF330Q9Y3S2 320 aaPredicted RBP4.69□□□□□ -1.66
PRKD3-210ENST00000494667 CMAHPQ9Y471 501 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 SCN9AQ15858 1988 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 A0A0A6YYJ9 748 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 FAM95CA0A1B0GW59 222 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 ZNF670-ZNF695F2Z2N8 137 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 F8W810 466 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 HS6ST1O60243 411 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 KLK8O60259 260 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 GMDSO60547 372 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 SELENOFO60613 162 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 FAM20BO75063 409 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 IL1AP01583 271 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 FGF2P09038 288 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 NCK1P16333 377 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 FPR1P21462 350 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 LHCGRP22888 699 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 NOS2P35228 1153 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 SESN2P58004 480 aaPredicted RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 IL5RAQ01344 420 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 DBPQ10586 325 aaPredicted RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 MXD4Q14582 209 aaPredicted RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 UGCGQ16739 394 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 DUSP6Q16828 381 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 KIF19Q2TAC6 998 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 TKFCQ3LXA3 575 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 FAM102BQ5T8I3 360 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 ATG9BQ674R7 924 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 KIAA0930Q6ICG6 404 aaPredicted RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 CASC4Q6P4E1 433 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 TMPRSS11AQ6ZMR5 421 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 KRT74Q7RTS7 529 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 UBE2J2Q8N2K1 259 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 CCDC24Q8N4L8 307 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 DENND6BQ8NEG7 585 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 ZNF675Q8TD23 568 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 MRGPRX2Q96LB1 330 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 PPP1R36Q96LQ0 422 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 KCTD15Q96SI1 283 aaPredicted RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 TMEM209Q96SK2 561 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 RNF32Q9H0A6 362 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 MINDY3Q9H8M7 445 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 DDX4Q9NQI0 724 aaKnown RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 ABCC13Q9NSE7 274 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 ERAP1Q9NZ08 941 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 TINAGQ9UJW2 476 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 COPS3Q9UNS2 423 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 ZNF638Q14966 1978 aaKnown RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 PLXNA1Q9UIW2 1896 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 A0A1B0GVI7 797 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 SH3D21A4FU49 640 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 WASHC1A8K0Z3 465 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 A8MV72 311 aaPredicted RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 E5RI56 91 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 SCN2BO60939 215 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 RECQL5O94762 991 aaPredicted RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 CFBP00751 764 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 CYBBP04839 570 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 PRKCBP05771 671 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 HLA-DOAP06340 250 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 PFKMP08237 780 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 OR56A5P0C7T3 313 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 PSMB4P28070 264 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 MAP2K3P46734 347 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 DAPP51397 102 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 POLR2JP52435 117 aaKnown RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 ERVK-8P63133 956 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 CD83Q01151 205 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 PTPN11Q06124 597 aaPredicted RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 MICBQ29980 383 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 ZNF628Q5EBL2 1059 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 NHLRC3Q5JS37 347 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 LIPIQ6XZB0 460 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 USP45Q70EL2 814 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 NKAIN4Q8IVV8 208 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 ZZZ3Q8IYH5 903 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 ENTHD1Q8IYW4 607 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 OR4F6Q8NGB9 312 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 TWIST2Q8WVJ9 160 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms