RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 A0A1W2PPV9 198 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 TCRBV21S2A2A0A5A6 115 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 BBIP1A8MTZ0 92 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 CACNB4O00305 520 aaPredicted RBP6.58□□□□□ -1.36
MSH5-217ENST00000494458 FOXE1O00358 373 aaPredicted RBP6.58□□□□□ -1.36
MSH5-217ENST00000494458 FPGTO14772 594 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 GIPC1O14908 333 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 PI15O43692 258 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 ZNF217O75362 1048 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 ATP6AP2O75787 350 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 KRT34O76011 436 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 SEMA4FO95754 770 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 NPPAP01160 153 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 KRT6AP02538 564 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 KRT6BP04259 564 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 SNRPB2P08579 225 aaKnown RBP6.58□□□□□ -1.36
MSH5-217ENST00000494458 ACADMP11310 421 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 GNAZP19086 355 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 JAK1P23458 1154 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 CCND1P24385 295 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 MAP4P27816 1152 aaKnown RBP6.58□□□□□ -1.36
MSH5-217ENST00000494458 HOXA6P31267 233 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 GNPDA1P46926 289 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 KRT6CP48668 564 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 HNRNPFP52597 415 aaKnown RBP6.58□□□□□ -1.36
MSH5-217ENST00000494458 PNLIPRP1P54315 467 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 DIO3P55073 304 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 MTTPP55157 894 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 CSTF3Q12996 717 aaKnown RBP6.58□□□□□ -1.36
MSH5-217ENST00000494458 STX5Q13190 355 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 NAE1Q13564 534 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 DOC2AQ14183 400 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 RCAN2Q14206 197 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 TLR1Q15399 786 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 MAPRE2Q15555 327 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 RBBP7Q16576 425 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 UAP1L1Q3KQV9 507 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 SPATS1Q496A3 300 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 RFTN2Q52LD8 501 aaPredicted RBP6.58□□□□□ -1.36
MSH5-217ENST00000494458 TCHHL1Q5QJ38 904 aaPredicted RBP6.58□□□□□ -1.36
MSH5-217ENST00000494458 TPRG1LQ5T0D9 272 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 ATG9BQ674R7 924 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 KIAA0895LQ68EN5 471 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 GALNT18Q6P9A2 607 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 CYB5D1Q6P9G0 228 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 Q7L0L9 218 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 LPCAT2Q7L5N7 544 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 ZFAND4Q86XD8 727 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 SNX32Q86XE0 403 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 FAM129CQ86XR2 697 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 DCUN1D3Q8IWE4 304 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 UBALD2Q8IYN6 164 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 DSELQ8IZU8 1212 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 PGAM4Q8N0Y7 254 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 ARHGAP24Q8N264 748 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 MIER2Q8N344 545 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 CAMKK1Q8N5S9 505 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 DPP10Q8N608 796 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 POU5F2Q8N7G0 328 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 KYQ8NBH2 561 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 ABHD11Q8NFV4 315 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 C1orf216Q8TAB5 229 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.58□□□□□ -1.36
MSH5-217ENST00000494458 ZFPM2Q8WW38 1151 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 PYCR2Q96C36 320 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 TUBGCP3Q96CW5 907 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 PPP3R2Q96LZ3 170 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 TMEM74Q96NL1 305 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 IER2Q9BTL4 223 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 SLC25A23Q9BV35 468 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 SARGQ9BW04 601 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 PITHD1Q9GZP4 211 aaPredicted RBP6.58□□□□□ -1.36
MSH5-217ENST00000494458 ATG10Q9H0Y0 220 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 DENND2DQ9H6A0 471 aaPredicted RBP6.58□□□□□ -1.36
MSH5-217ENST00000494458 NT5DC2Q9H857 520 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 BRF2Q9HAW0 419 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 FGF22Q9HCT0 170 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 TRNAU1APQ9NX07 287 aaKnown RBP6.58□□□□□ -1.36
MSH5-217ENST00000494458 SPATA7Q9P0W8 599 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 MAP10Q9P2G4 905 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 CD300AQ9UGN4 299 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 ZNF490Q9ULM2 529 aaPredicted RBP6.58□□□□□ -1.36
MSH5-217ENST00000494458 PNMA8BQ9ULN7 279 aaPredicted RBP6.58□□□□□ -1.36
MSH5-217ENST00000494458 PRPF19Q9UMS4 504 aaKnown RBP6.58□□□□□ -1.36
MSH5-217ENST00000494458 SUFUQ9UMX1 484 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 SNX6Q9UNH7 406 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 BTRCQ9Y297 605 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 WDR37Q9Y2I8 494 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 TMED5Q9Y3A6 229 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 KCNE2Q9Y6J6 123 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 EYSQ5T1H1 3165 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 NUMA1Q14980 2115 aa6.58□□□□□ -1.36
MSH5-217ENST00000494458 DOCK9Q9BZ29 2069 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 A0A1W2PP18 115 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 A0A1W2PPC4 97 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 PRSS38A1L453 326 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 FAM234BA2RU67 622 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 KRT87PA6NCN2 255 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 PRAMEF26H0Y7S4 382 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 IFRD1O00458 451 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms