RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 PAFAH2Q99487 392 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 DDA1Q9BW61 102 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 EPB41L4BQ9H329 900 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 SOHLH2Q9NX45 425 aa13.07□□□□□ -0.32
COL1A1-208ENST00000494334 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.07□□□□□ -0.32
COL1A1-208ENST00000494334 V9GYY5 206 aaPredicted RBP13.07□□□□□ -0.32
COL1A1-208ENST00000494334 CDC7O00311 574 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 HIST1H2AGP0C0S8 130 aaPredicted RBP13.06□□□□□ -0.32
COL1A1-208ENST00000494334 HIST1H2ADP20671 130 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 PSMB5P28074 263 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 VSNL1P62760 191 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 ACY1Q03154 408 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 BMPR2Q13873 1038 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 SLC29A2Q14542 456 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 SF1Q15637 639 aaKnown RBP13.06□□□□□ -0.32
COL1A1-208ENST00000494334 ZIC1Q15915 447 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 TMTC4Q5T4D3 741 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 SUSD1Q6UWL2 747 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 SBSNQ6UWP8 590 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 CEACAM20Q6UY09 585 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 MBOAT1Q6ZNC8 495 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 CMC1Q7Z7K0 106 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 SPATA6LQ8N4H0 392 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 C19orf47Q8N9M1 422 aaKnown RBP13.06□□□□□ -0.32
COL1A1-208ENST00000494334 PPFIBP2Q8ND30 876 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 OR2A1Q8NGT9 310 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.06□□□□□ -0.322e-12■■■■■ 101.6
COL1A1-208ENST00000494334 SMPDL3AQ92484 453 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 HIST1H2AHQ96KK5 128 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 TEFMQ96QE5 360 aaKnown RBP13.06□□□□□ -0.32
COL1A1-208ENST00000494334 HIST1H2AJQ99878 128 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 H2AFJQ9BTM1 129 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 ASPSCR1Q9BZE9 553 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 UNKQ9C0B0 810 aaKnown RBP13.06□□□□□ -0.32
COL1A1-208ENST00000494334 FAM60AQ9NP50 221 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 PDE7BQ9NP56 450 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.06□□□□□ -0.32
COL1A1-208ENST00000494334 ACSL6Q9UKU0 697 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 ZMIZ1Q9ULJ6 1067 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 KLHL20Q9Y2M5 609 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 RAXQ9Y2V3 346 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 PCDHB11Q9Y5F2 797 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 AKAP13Q12802 2813 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 CEP295Q9C0D2 2601 aa13.06□□□□□ -0.32
COL1A1-208ENST00000494334 TPRP12270 2363 aaKnown RBP13.05□□□□□ -0.32
COL1A1-208ENST00000494334 ZNF839A8K0R7 811 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 POC1B-GALNT4F8VUJ3 575 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 INHBAP08476 426 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 ENO2P09104 434 aaPredicted RBP13.05□□□□□ -0.32
COL1A1-208ENST00000494334 SLC35E2BP0CK96 405 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 CCDC166P0CW27 439 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 FGF5P12034 268 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 MAGP20916 626 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 CRABP2P29373 138 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 GMPRP36959 345 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 EIF2S3P41091 472 aaKnown RBP13.05□□□□□ -0.32
COL1A1-208ENST00000494334 MSH2P43246 934 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 CSRP3P50461 194 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 PCBP4P57723 403 aaKnown RBP13.05□□□□□ -0.32
COL1A1-208ENST00000494334 YBX1P67809 324 aaKnown RBP13.05□□□□□ -0.32
COL1A1-208ENST00000494334 TUBB3Q13509 450 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 IL11RAQ14626 422 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 GPR19Q15760 415 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 PPP1R3AQ16821 1122 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 ERCC6LQ2NKX8 1250 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 KIAA1614Q5VZ46 1190 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 CDHR3Q6ZTQ4 885 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 RAPH1Q70E73 1250 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 SYTL1Q8IYJ3 562 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 DCAKDQ8WVC6 231 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 ZNF501Q96CX3 271 aaPredicted RBP13.05□□□□□ -0.32
COL1A1-208ENST00000494334 TCTN2Q96GX1 697 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 UBXN10Q96LJ8 280 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 ZPBPQ9BS86 351 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 ACAT2Q9BWD1 397 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 SPRY4Q9C004 299 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 DERL2Q9GZP9 239 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 FGF21Q9NSA1 209 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 STOX2Q9P2F5 926 aaPredicted RBP13.05□□□□□ -0.32
COL1A1-208ENST00000494334 CTNNAL1Q9UBT7 734 aa13.05□□□□□ -0.32
COL1A1-208ENST00000494334 NOVA2Q9UNW9 492 aaKnown RBP13.05□□□□□ -0.32
COL1A1-208ENST00000494334 EXOC1LA0A1B0GW35 172 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 NPEPPSL1A6NEC2 478 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 FKBP9O95302 570 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 CD1DP15813 335 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 CD82P27701 267 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 GCAP28676 217 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 GRIA3P42263 894 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 SERPINB9P50453 376 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 AP1S2P56377 157 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 DLG1Q12959 904 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 TSTA3Q13630 321 aaPredicted RBP13.04□□□□□ -0.32
COL1A1-208ENST00000494334 CSHL1Q14406 222 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 TSNQ15631 228 aaKnown RBP13.04□□□□□ -0.32
COL1A1-208ENST00000494334 ZXDCQ2QGD7 858 aaPredicted RBP13.04□□□□□ -0.32
COL1A1-208ENST00000494334 FCRL6Q6DN72 434 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 WDR93Q6P2C0 686 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 CYB5D1Q6P9G0 228 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 FIGLAQ6QHK4 219 aa13.04□□□□□ -0.32
COL1A1-208ENST00000494334 AGTRAPQ6RW13 159 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms