RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 NADK2Q4G0N4 442 aa12.88□□□□□ -0.35
CTDSP1-212ENST00000494067 MRNIPQ6NTE8 343 aa12.88□□□□□ -0.35
CTDSP1-212ENST00000494067 AGGF1Q8N302 714 aaeCLIP12.88□□□□□ -0.35
CTDSP1-212ENST00000494067 DTWD1Q8N5C7 304 aa12.88□□□□□ -0.35
CTDSP1-212ENST00000494067 TRIM58Q8NG06 486 aa12.88□□□□□ -0.35
CTDSP1-212ENST00000494067 OR2L8Q8NGY9 312 aa12.88□□□□□ -0.35
CTDSP1-212ENST00000494067 COL26A1Q96A83 441 aa12.88□□□□□ -0.35
CTDSP1-212ENST00000494067 PTERQ96BW5 349 aa12.88□□□□□ -0.35
CTDSP1-212ENST00000494067 MS4A14Q96JA4 679 aa12.88□□□□□ -0.35
CTDSP1-212ENST00000494067 BIRC8Q96P09 236 aa12.88□□□□□ -0.35
CTDSP1-212ENST00000494067 SLC22A11Q9NSA0 550 aa12.88□□□□□ -0.35
CTDSP1-212ENST00000494067 EURLQ9NYK6 297 aa12.88□□□□□ -0.35
CTDSP1-212ENST00000494067 C5AR2Q9P296 337 aa12.88□□□□□ -0.35
CTDSP1-212ENST00000494067 MAP10Q9P2G4 905 aa12.88□□□□□ -0.35
CTDSP1-212ENST00000494067 DHCR7Q9UBM7 475 aaKnown RBP12.88□□□□□ -0.35
CTDSP1-212ENST00000494067 PPP2R2CQ9Y2T4 447 aa12.88□□□□□ -0.35
CTDSP1-212ENST00000494067 FLNCQ14315 2725 aa12.88□□□□□ -0.35
CTDSP1-212ENST00000494067 SPTA1P02549 2419 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 COL12A1Q99715 3063 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 H3BMM5 538 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 RASGRF2O14827 1237 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 PRICKLE3O43900 615 aaPredicted RBP12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 KLF7O75840 302 aaPredicted RBP12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 CEACAM4O75871 244 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 IPO13O94829 963 aaKnown RBP12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 MAGP20916 626 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 PSMB5P28074 263 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 CCNFP41002 786 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 VPS41P49754 854 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 EIF3BP55884 814 aaKnown RBP12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 SLC9A5Q14940 896 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 NAA25Q14CX7 972 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 CYP2A13Q16696 494 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 NKAIN1Q4KMZ8 207 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 TCTE1Q5JU00 501 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 RNF187Q5TA31 235 aaPredicted RBP12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 YOD1Q5VVQ6 348 aaPredicted RBP12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 FCRL6Q6DN72 434 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 CAND1Q86VP6 1230 aaKnown RBP12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 MCATQ8IVS2 390 aaKnown RBP12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 TTC29Q8NA56 475 aaPredicted RBP12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 GALNT11Q8NCW6 608 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 OR2Y1Q8NGV0 311 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 TM9SF4Q92544 642 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 ZUFSPQ96AP4 578 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 FAM136AQ96C01 138 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 VPS50Q96JG6 964 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 GBP5Q96PP8 586 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 KIFC1Q9BW19 673 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 SLC29A3Q9BZD2 475 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 SYNPO2LQ9H987 977 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 TSR3Q9UJK0 312 aaKnown RBP12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 NEU2Q9Y3R4 380 aa12.87□□□□□ -0.35
CTDSP1-212ENST00000494067 NIPSNAP2O75323 286 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 VAPBO95292 243 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 MED26O95402 600 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 TPSB2P20231 275 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 RPS3P23396 243 aaKnown RBP eCLIP12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 GBX1Q14549 363 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 GRM7Q14831 915 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 TPSAB1Q15661 275 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 FAM214AQ32MH5 1076 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 FHL5Q5TD97 284 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 VWA5B1Q5TIE3 1220 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 IRAK1BP1Q5VVH5 260 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 JMJD6Q6NYC1 403 aaPredicted RBP12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 LRRC8BQ6P9F7 803 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 TTLL10Q6ZVT0 673 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 MRGPREQ86SM8 312 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 LPGAT1Q92604 370 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 NACC2Q96BF6 587 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 TCF12Q99081 682 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 SMAD5Q99717 465 aaKnown RBP12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 SLC30A3Q99726 388 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 NUDT9Q9BW91 350 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 MRM3Q9HC36 420 aaKnown RBP12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 LRRC4CQ9HCJ2 640 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 ATP13A2Q9NQ11 1180 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 SOX13Q9UN79 622 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 VPS9D1Q9Y2B5 631 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 FAM169AQ9Y6X4 670 aa12.86□□□□□ -0.35
CTDSP1-212ENST00000494067 PCM1Q15154 2024 aa12.85□□□□□ -0.35
CTDSP1-212ENST00000494067 A0A1B0GX78 115 aa12.85□□□□□ -0.35
CTDSP1-212ENST00000494067 A0A1W2PPV9 198 aa12.85□□□□□ -0.35
CTDSP1-212ENST00000494067 TARM1B6A8C7 271 aa12.85□□□□□ -0.35
CTDSP1-212ENST00000494067 E5RI56 91 aa12.85□□□□□ -0.35
CTDSP1-212ENST00000494067 SRPX2O60687 465 aaPredicted RBP12.85□□□□□ -0.35
CTDSP1-212ENST00000494067 C1orf105O95561 183 aa12.85□□□□□ -0.35
CTDSP1-212ENST00000494067 ALBP02768 609 aa12.85□□□□□ -0.35
CTDSP1-212ENST00000494067 CHRM3P20309 590 aa12.85□□□□□ -0.35
CTDSP1-212ENST00000494067 MCM3P25205 808 aa12.85□□□□□ -0.35
CTDSP1-212ENST00000494067 FMO4P31512 558 aa12.85□□□□□ -0.35
CTDSP1-212ENST00000494067 MAGEA6P43360 314 aa12.85□□□□□ -0.35
CTDSP1-212ENST00000494067 FASTKQ14296 549 aaKnown RBP12.85□□□□□ -0.35
CTDSP1-212ENST00000494067 TYSND1Q2T9J0 566 aa12.85□□□□□ -0.35
CTDSP1-212ENST00000494067 DCAF10Q5QP82 559 aa12.85□□□□□ -0.35
CTDSP1-212ENST00000494067 ARMC3Q5W041 872 aa12.85□□□□□ -0.35
CTDSP1-212ENST00000494067 CASC4Q6P4E1 433 aa12.85□□□□□ -0.35
CTDSP1-212ENST00000494067 FIGLAQ6QHK4 219 aa12.85□□□□□ -0.35
CTDSP1-212ENST00000494067 CENPUQ71F23 418 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms