RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 SH2D5Q6ZV89 423 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 GLRX5Q86SX6 157 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 UBTD2Q8WUN7 234 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 ZNF480Q8WV37 535 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 RHBDF1Q96CC6 855 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 MAGEB10Q96LZ2 347 aaPredicted RBP14.45□□□□□ -0.1
ACTB-213ENST00000493945 FAM111AQ96PZ2 611 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 GFM1Q96RP9 751 aaKnown RBP14.45□□□□□ -0.1
ACTB-213ENST00000493945 RTKNQ9BST9 563 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 RAB33BQ9H082 229 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 HRASLS2Q9NWW9 162 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 AKAP7Q9P0M2 348 aaPredicted RBP14.45□□□□□ -0.1
ACTB-213ENST00000493945 KCNE2Q9Y6J6 123 aa14.45□□□□□ -0.1
ACTB-213ENST00000493945 ZFHX2Q9C0A1 2572 aaPredicted RBP14.45□□□□□ -0.1
ACTB-213ENST00000493945 PCM1Q15154 2024 aa14.44□□□□□ -0.1
ACTB-213ENST00000493945 IGHV1OR21-1A0A087WYE8 117 aa14.44□□□□□ -0.1
ACTB-213ENST00000493945 H3BQF6 201 aa14.44□□□□□ -0.1
ACTB-213ENST00000493945 PROCP04070 461 aa14.44□□□□□ -0.1
ACTB-213ENST00000493945 RPLP0P05388 317 aaKnown RBP14.44□□□□□ -0.1
ACTB-213ENST00000493945 CHRM5P08912 532 aaPredicted RBP14.44□□□□□ -0.1
ACTB-213ENST00000493945 CEACAM1P13688 526 aa14.44□□□□□ -0.1
ACTB-213ENST00000493945 NR1D1P20393 614 aa14.44□□□□□ -0.1
ACTB-213ENST00000493945 TBPL1P62380 186 aa14.44□□□□□ -0.1
ACTB-213ENST00000493945 AMZ1Q400G9 498 aa14.44□□□□□ -0.1
ACTB-213ENST00000493945 IRGCQ6NXR0 463 aa14.44□□□□□ -0.1
ACTB-213ENST00000493945 WDR74Q6RFH5 385 aaPredicted RBP14.44□□□□□ -0.1
ACTB-213ENST00000493945 PIP4P1Q86T03 277 aa14.44□□□□□ -0.1
ACTB-213ENST00000493945 KIRREL3Q8IZU9 778 aa14.44□□□□□ -0.1
ACTB-213ENST00000493945 PTGR2Q8N8N7 351 aaPredicted RBP14.44□□□□□ -0.1
ACTB-213ENST00000493945 ANKRD42Q8N9B4 389 aa14.44□□□□□ -0.1
ACTB-213ENST00000493945 Q8N9G6 341 aaPredicted RBP14.44□□□□□ -0.1
ACTB-213ENST00000493945 ARMC2Q8NEN0 867 aa14.44□□□□□ -0.1
ACTB-213ENST00000493945 DYDC1Q8WWB3 177 aa14.44□□□□□ -0.1
ACTB-213ENST00000493945 DLG3Q92796 817 aa14.44□□□□□ -0.1
ACTB-213ENST00000493945 TBC1D10AQ9BXI6 508 aa14.44□□□□□ -0.1
ACTB-213ENST00000493945 LRRN3Q9H3W5 708 aa14.44□□□□□ -0.1
ACTB-213ENST00000493945 ZNF358Q9NW07 568 aa14.44□□□□□ -0.1
ACTB-213ENST00000493945 GPRC5BQ9NZH0 403 aa14.44□□□□□ -0.1
ACTB-213ENST00000493945 COPG2Q9UBF2 871 aa14.44□□□□□ -0.1
ACTB-213ENST00000493945 EPHA6Q9UF33 1036 aa14.44□□□□□ -0.1
ACTB-213ENST00000493945 PLAGL1Q9UM63 463 aa14.44□□□□□ -0.1
ACTB-213ENST00000493945 TLCD2A6NGC4 264 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 E7ENX8 843 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 CLGNO14967 610 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 BIRC5O15392 142 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 TOX3O15405 576 aaPredicted RBP14.43□□□□□ -0.1
ACTB-213ENST00000493945 KLK8O60259 260 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 CCNT2O60583 730 aaKnown RBP14.43□□□□□ -0.1
ACTB-213ENST00000493945 CBFA2T3O75081 653 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 WDR47O94967 919 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 SNUPNO95149 360 aaKnown RBP14.43□□□□□ -0.1
ACTB-213ENST00000493945 EPB42P16452 691 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 GRK3P35626 688 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 GGT5P36269 586 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 ARL4DP49703 201 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 ACADVLP49748 655 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 PPP2R2AP63151 447 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 TAP2Q03519 686 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 SQSTM1Q13501 440 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 NAE1Q13564 534 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 PDK4Q16654 411 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 SLC5A12Q1EHB4 618 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 TTMPQ5BVD1 217 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 LIPMQ5VYY2 423 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 C16orf46Q6P387 395 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 LCTLQ6UWM7 567 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 C17orf64Q86WR6 236 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 ZNF761Q86XN6 746 aaPredicted RBP14.43□□□□□ -0.1
ACTB-213ENST00000493945 OR56A3Q8NH54 315 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 NCSTNQ92542 709 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 ARL8AQ96BM9 186 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 CD244Q9BZW8 370 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 XKR8Q9H6D3 395 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 CAAP1Q9H8G2 361 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 DNAJC11Q9NVH1 559 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 ACTR10Q9NZ32 417 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 ANKMY1Q9P2S6 941 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 RAPGEFL1Q9UHV5 662 aa14.43□□□□□ -0.1
ACTB-213ENST00000493945 PTBP2Q9UKA9 531 aaKnown RBP14.43□□□□□ -0.1
ACTB-213ENST00000493945 PTPRZ1P23471 2315 aaPredicted RBP14.43□□□□□ -0.1
ACTB-213ENST00000493945 GVINP1Q7Z2Y8 2422 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 LY6G6EA0A0G2JKS1 128 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 A8MT66 165 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 K7EPI3 171 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 TRIM13O60858 407 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 RASSF9O75901 435 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 TOP3BO95985 862 aaKnown RBP14.42□□□□□ -0.1
ACTB-213ENST00000493945 TYRP1P17643 537 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 GNAZP19086 355 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 POLR2CP19387 275 aaPredicted RBP14.42□□□□□ -0.1
ACTB-213ENST00000493945 CDH3P22223 829 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 CXCR2P25025 360 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 SERPINB5P36952 375 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 ARL1P40616 181 aaPredicted RBP14.42□□□□□ -0.1
ACTB-213ENST00000493945 NOVA1P51513 510 aaKnown RBP14.42□□□□□ -0.1
ACTB-213ENST00000493945 OR1D5P58170 312 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 DNAJB13P59910 316 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 HERVK_113P63132 956 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 CDC16Q13042 620 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 GRB7Q14451 532 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms