RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 NUSAP1Q9BXS6 441 aaKnown RBP12.27□□□□□ -0.45
VPS52-220ENST00000493674 SHCBP1LQ9BZQ2 653 aa12.27□□□□□ -0.45
VPS52-220ENST00000493674 ATG10Q9H0Y0 220 aa12.27□□□□□ -0.45
VPS52-220ENST00000493674 NOL11Q9H8H0 719 aaKnown RBP12.27□□□□□ -0.45
VPS52-220ENST00000493674 TRPS1Q9UHF7 1281 aa12.27□□□□□ -0.45
VPS52-220ENST00000493674 RAPGEFL1Q9UHV5 662 aa12.27□□□□□ -0.45
VPS52-220ENST00000493674 DCTN4Q9UJW0 460 aa12.27□□□□□ -0.45
VPS52-220ENST00000493674 TRAF6Q9Y4K3 522 aa12.27□□□□□ -0.45
VPS52-220ENST00000493674 FAM186AA6NE01 2351 aa12.27□□□□□ -0.45
VPS52-220ENST00000493674 ASXL3Q9C0F0 2248 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 OTOGLQ3ZCN5 2332 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 FRYLO94915 3013 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 A0A1W2PPV9 198 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 OR5K4A6NMS3 321 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 SDHDO14521 159 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 UGDHO60701 494 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 KATNA1O75449 491 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 EBLN1P0CF75 366 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 XRCC1P18887 633 aaPredicted RBP12.26□□□□□ -0.45
VPS52-220ENST00000493674 CCND1P24385 295 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 HOXD12P35452 270 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 SLC19A1P41440 591 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 CASP2P42575 452 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 DHPSP49366 369 aaPredicted RBP12.26□□□□□ -0.45
VPS52-220ENST00000493674 CSNK1EP49674 416 aaKnown RBP12.26□□□□□ -0.45
VPS52-220ENST00000493674 IDH3AP50213 366 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 RAB28P51157 221 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 AQP5P55064 265 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 FOXA1P55317 472 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 RBBP7Q16576 425 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 FAM219BQ5XKK7 198 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 C6orf89Q6UWU4 347 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 CLYBLQ8N0X4 340 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 L3MBTL4Q8NA19 623 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 OR4F6Q8NGB9 312 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 OR2L8Q8NGY9 312 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 AGR3Q8TD06 166 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 ZFPM2Q8WW38 1151 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 PYCR2Q96C36 320 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 WDR34Q96EX3 536 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 FERD3LQ96RJ6 166 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 KCNA7Q96RP8 456 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 EBF4Q9BQW3 602 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 PLCD4Q9BRC7 762 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 SLC29A3Q9BZD2 475 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 MEAF6Q9HAF1 191 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 TMEM74BQ9NUR3 256 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 IMP3Q9NV31 184 aaKnown RBP12.26□□□□□ -0.45
VPS52-220ENST00000493674 GPRC5BQ9NZH0 403 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 SUSD2Q9UGT4 822 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 CIDEBQ9UHD4 219 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 ICKQ9UPZ9 632 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 SLC22A14Q9Y267 594 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 DNAJC15Q9Y5T4 150 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 ZNF292O60281 2723 aa12.26□□□□□ -0.45
VPS52-220ENST00000493674 COL5A1P20908 1838 aaPredicted RBP12.25□□□□□ -0.45
VPS52-220ENST00000493674 KIR2DS5A0A0G2JLQ3 304 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 A0A0G2JND7 137 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 A0A0G2JNG1 304 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 A0A1B0GVT2 93 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 ZNF839A8K0R7 811 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 KIR2DS3K7RE56 304 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 PRICKLE3O43900 615 aaPredicted RBP12.25□□□□□ -0.45
VPS52-220ENST00000493674 WFS1O76024 890 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 OR4F21O95013 312 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 UROSP10746 265 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 CTSEP14091 401 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 SLC2A4P14672 509 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 NPPBP16860 134 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 RXRGP48443 463 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 CCNG1P51959 295 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 ARFIP2P53365 341 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 HNRNPKP61978 463 aaKnown RBP eCLIP12.25□□□□□ -0.45
VPS52-220ENST00000493674 BTKQ06187 659 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 PRKG2Q13237 762 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 FASTKQ14296 549 aaKnown RBP12.25□□□□□ -0.45
VPS52-220ENST00000493674 KIR2DS5Q14953 304 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 ELOCQ15369 112 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 TEAD4Q15561 434 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 TBCCQ15814 346 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 SLC9B1Q4ZJI4 515 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 PRRT3Q5FWE3 981 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 XKR7Q5GH72 579 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 VWA5B1Q5TIE3 1220 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 CLEC6AQ6EIG7 209 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 CAPN13Q6MZZ7 669 aaPredicted RBP12.25□□□□□ -0.45
VPS52-220ENST00000493674 LCTLQ6UWM7 567 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 C17orf82Q86X59 251 aaPredicted RBP12.25□□□□□ -0.45
VPS52-220ENST00000493674 HOMEZQ8IX15 550 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 SYTL1Q8IYJ3 562 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 NAGSQ8N159 534 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 SFRP1Q8N474 314 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 AFAP1L2Q8N4X5 818 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 LINC01555Q8NAE3 123 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 PPFIBP2Q8ND30 876 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 ZNF548Q8NEK5 533 aaPredicted RBP12.25□□□□□ -0.45
VPS52-220ENST00000493674 OR52E1Q8NGJ3 308 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 SETD7Q8WTS6 366 aaKnown RBP12.25□□□□□ -0.45
VPS52-220ENST00000493674 FAM122AQ96E09 287 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 MAGEB10Q96LZ2 347 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms