RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 PGBD3Q8N328 593 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 KLHL36Q8N4N3 616 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 MYCT1Q8N699 235 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 C7orf31Q8N865 590 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 COQ8AQ8NI60 647 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 BPIFB1Q8TDL5 484 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 SLC13A3Q8WWT9 602 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 NSMAFQ92636 917 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 TEKT3Q9BXF9 490 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 TGIF2Q9GZN2 237 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 IKZF4Q9H2S9 585 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 SMOC2Q9H3U7 446 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 CDCP1Q9H5V8 836 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 INTS10Q9NVR2 710 aaKnown RBP6.71□□□□□ -1.34
VPS13B-205ENST00000493587 DMAC2Q9NW81 257 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 MID2Q9UJV3 735 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 OSGIN1Q9UJX0 560 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 ELF5Q9UKW6 265 aaPredicted RBP6.71□□□□□ -1.34
VPS13B-205ENST00000493587 SSR3Q9UNL2 185 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 ACOT9Q9Y305 439 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 MAFBQ9Y5Q3 323 aaPredicted RBP6.71□□□□□ -1.34
VPS13B-205ENST00000493587 PIAS3Q9Y6X2 628 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 SLC22A23A1A5C7 686 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 MROH6A6NGR9 719 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 FAM74A7A6NL05 159 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 PDCD5O14737 125 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 TRIM13O60858 407 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 UGT2B17O75795 530 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 TGM6O95932 706 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 ALDH1A1P00352 501 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 ERCC2P18074 760 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 WARSP23381 471 aaKnown RBP6.71□□□□□ -1.34
VPS13B-205ENST00000493587 GADD45AP24522 165 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 IL1R2P27930 398 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 CD79BP40259 229 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 CTSKP43235 329 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 NRLP54845 237 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 GABARAPL2P60520 117 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 PSMC5P62195 406 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 PPP1R8Q12972 351 aaKnown RBP6.71□□□□□ -1.34
VPS13B-205ENST00000493587 RPS6KA2Q15349 733 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 FAM74A3Q4VXF1 159 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 ACAD10Q6JQN1 1059 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 PRMT9Q6P2P2 845 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 SPESP1Q6UW49 350 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 KDELC1Q6UW63 502 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 SH2D5Q6ZV89 423 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 GPRIN3Q6ZVF9 776 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 AHSA2Q719I0 299 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 OR1M1Q8NGA1 313 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 COQ8BQ96D53 544 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 DUS3LQ96G46 650 aaKnown RBP6.71□□□□□ -1.34
VPS13B-205ENST00000493587 PDXPQ96GD0 296 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 KCNA7Q96RP8 456 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 NELL2Q99435 816 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 WNT5BQ9H1J7 359 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 MED28Q9H204 178 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 TFB2MQ9H5Q4 396 aaKnown RBP6.71□□□□□ -1.34
VPS13B-205ENST00000493587 SMURF2Q9HAU4 748 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 MYOZ2Q9NPC6 264 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 TLR6Q9Y2C9 796 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 FKBP7Q9Y680 259 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 MCM3APO60318 1980 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 ASTN1O14525 1302 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 PRAMEF33A0A0G2JMD5 474 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 AQP12BA6NM10 295 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 B4DXG7 233 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 E9PI62 339 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 M0R233 179 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 CBX4O00257 560 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 NR5A2O00482 541 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 SOCS7O14512 581 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 CST8O60676 142 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 PRAMEF10O60809 474 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 GUCA1CO95843 209 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 RB1P06400 928 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 SNRPB2P08579 225 aaKnown RBP6.7□□□□□ -1.34
VPS13B-205ENST00000493587 HTR1AP08908 422 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 TSPAN19P0C672 248 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 ZDHHC11BP0C7U3 371 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 SMIM6P0DI80 62 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 CYP4B1P13584 511 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 JUNDP17535 347 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 RFC2P35250 354 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 HSF2Q03933 536 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 RAPSNQ13702 412 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 PON3Q15166 354 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 HFEQ30201 348 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 ARHGAP17Q68EM7 881 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 LAMTOR1Q6IAA8 161 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 OR7E24Q6IFN5 339 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 CES5AQ6NT32 575 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 TFAP2EQ6VUC0 442 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 SPOCD1Q6ZMY3 1216 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 USP51Q70EK9 711 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 SPRED1Q7Z699 444 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 RFX6Q8HWS3 928 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 AQP12AQ8IXF9 295 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 DCP1BQ8IZD4 617 aaKnown RBP6.7□□□□□ -1.34
VPS13B-205ENST00000493587 LMO3Q8TAP4 145 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms