RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 C4orf17Q53FE4 359 aa18.94■□□□□ 0.62
SREBF1-216ENST00000490796 PRR30Q53SZ7 412 aaPredicted RBP18.94■□□□□ 0.62
SREBF1-216ENST00000490796 IRAK1BP1Q5VVH5 260 aa18.94■□□□□ 0.62
SREBF1-216ENST00000490796 MRPL14Q6P1L8 145 aaKnown RBP18.94■□□□□ 0.62
SREBF1-216ENST00000490796 FIGLAQ6QHK4 219 aa18.94■□□□□ 0.62
SREBF1-216ENST00000490796 SDCCAG8Q86SQ7 713 aaPredicted RBP18.94■□□□□ 0.62
SREBF1-216ENST00000490796 LRRC6Q86X45 466 aa18.94■□□□□ 0.62
SREBF1-216ENST00000490796 MPP5Q8N3R9 675 aa18.94■□□□□ 0.62
SREBF1-216ENST00000490796 ZADH2Q8N4Q0 377 aa18.94■□□□□ 0.62
SREBF1-216ENST00000490796 SSC4DQ8WTU2 575 aa18.94■□□□□ 0.62
SREBF1-216ENST00000490796 MAIP1Q8WWC4 291 aa18.94■□□□□ 0.62
SREBF1-216ENST00000490796 SELENOSQ9BQE4 189 aa18.94■□□□□ 0.62
SREBF1-216ENST00000490796 EIF2B3Q9NR50 452 aaKnown RBP18.94■□□□□ 0.62
SREBF1-216ENST00000490796 MARCH4Q9P2E8 410 aaPredicted RBP18.94■□□□□ 0.62
SREBF1-216ENST00000490796 CDC23Q9UJX2 597 aa18.94■□□□□ 0.62
SREBF1-216ENST00000490796 TTC7AQ9ULT0 858 aaPredicted RBP18.94■□□□□ 0.62
SREBF1-216ENST00000490796 B3GNT3Q9Y2A9 372 aa18.94■□□□□ 0.62
SREBF1-216ENST00000490796 SPENQ96T58 3664 aaKnown RBP18.94■□□□□ 0.62
SREBF1-216ENST00000490796 NOTCH2Q04721 2471 aa18.94■□□□□ 0.62
SREBF1-216ENST00000490796 FER1L5A0AVI2 2057 aa18.93■□□□□ 0.62
SREBF1-216ENST00000490796 FKBP9O95302 570 aa18.93■□□□□ 0.62
SREBF1-216ENST00000490796 ITGA3P26006 1051 aa18.93■□□□□ 0.62
SREBF1-216ENST00000490796 GRIA3P42263 894 aa18.93■□□□□ 0.62
SREBF1-216ENST00000490796 EIF3BP55884 814 aaKnown RBP18.93■□□□□ 0.62
SREBF1-216ENST00000490796 YOD1Q5VVQ6 348 aaPredicted RBP18.93■□□□□ 0.62
SREBF1-216ENST00000490796 PPP1R32Q7Z5V6 425 aa18.93■□□□□ 0.62
SREBF1-216ENST00000490796 GAS2L3Q86XJ1 694 aa18.93■□□□□ 0.62
SREBF1-216ENST00000490796 LMNTD1Q8N9Z9 388 aa18.93■□□□□ 0.62
SREBF1-216ENST00000490796 Q8NA96 180 aa18.93■□□□□ 0.62
SREBF1-216ENST00000490796 MAGEC3Q8TD91 643 aa18.93■□□□□ 0.62
SREBF1-216ENST00000490796 FKBP10Q96AY3 582 aa18.93■□□□□ 0.62
SREBF1-216ENST00000490796 VPS50Q96JG6 964 aa18.93■□□□□ 0.62
SREBF1-216ENST00000490796 CUTCQ9NTM9 273 aa18.93■□□□□ 0.62
SREBF1-216ENST00000490796 FAM169AQ9Y6X4 670 aa18.93■□□□□ 0.62
SREBF1-216ENST00000490796 CCDC88CQ9P219 2028 aa18.93■□□□□ 0.62
SREBF1-216ENST00000490796 SHANK1Q9Y566 2161 aa18.92■□□□□ 0.62
SREBF1-216ENST00000490796 TCP11X1B4DZS4 312 aa18.92■□□□□ 0.62
SREBF1-216ENST00000490796 AGPSO00116 658 aa18.92■□□□□ 0.62
SREBF1-216ENST00000490796 DSCR3O14972 297 aa18.92■□□□□ 0.62
SREBF1-216ENST00000490796 ALBP02768 609 aa18.92■□□□□ 0.62
SREBF1-216ENST00000490796 CCNFP41002 786 aa18.92■□□□□ 0.62
SREBF1-216ENST00000490796 CRADDP78560 199 aa18.92■□□□□ 0.62
SREBF1-216ENST00000490796 AIMP2Q13155 320 aaKnown RBP18.92■□□□□ 0.62
SREBF1-216ENST00000490796 EIF2S3LQ2VIR3 472 aaKnown RBP18.92■□□□□ 0.62
SREBF1-216ENST00000490796 FAM214AQ32MH5 1076 aa18.92■□□□□ 0.62
SREBF1-216ENST00000490796 PLEKHN1Q494U1 663 aaPredicted RBP18.92■□□□□ 0.62
SREBF1-216ENST00000490796 MRNIPQ6NTE8 343 aa18.92■□□□□ 0.62
SREBF1-216ENST00000490796 OVCH1Q7RTY7 1134 aa18.92■□□□□ 0.62
SREBF1-216ENST00000490796 PRR7Q8TB68 274 aa18.92■□□□□ 0.62
SREBF1-216ENST00000490796 ZUFSPQ96AP4 578 aa18.92■□□□□ 0.62
SREBF1-216ENST00000490796 NACC2Q96BF6 587 aa18.92■□□□□ 0.62
SREBF1-216ENST00000490796 DRG1Q9Y295 367 aaKnown RBP18.92■□□□□ 0.62
SREBF1-216ENST00000490796 ANKRD12Q6UB98 2062 aa18.92■□□□□ 0.62
SREBF1-216ENST00000490796 CNOT3O75175 753 aaKnown RBP18.91■□□□□ 0.62
SREBF1-216ENST00000490796 UMODP07911 640 aa18.91■□□□□ 0.62
SREBF1-216ENST00000490796 MMP11P24347 488 aa18.91■□□□□ 0.62
SREBF1-216ENST00000490796 BDKRB1P46663 353 aa18.91■□□□□ 0.62
SREBF1-216ENST00000490796 FOXL2P58012 376 aa18.91■□□□□ 0.62
SREBF1-216ENST00000490796 MRPL49Q13405 166 aaKnown RBP18.91■□□□□ 0.62
SREBF1-216ENST00000490796 GRB7Q14451 532 aa18.91■□□□□ 0.62
SREBF1-216ENST00000490796 MEI1Q5TIA1 1274 aa18.91■□□□□ 0.62
SREBF1-216ENST00000490796 FCRL6Q6DN72 434 aa18.91■□□□□ 0.62
SREBF1-216ENST00000490796 CNSTQ6PJW8 725 aa18.91■□□□□ 0.62
SREBF1-216ENST00000490796 CISD2Q8N5K1 135 aaKnown RBP18.91■□□□□ 0.62
SREBF1-216ENST00000490796 MENTQ9BUN1 341 aa18.91■□□□□ 0.62
SREBF1-216ENST00000490796 ZNF552Q9H707 407 aaPredicted RBP18.91■□□□□ 0.62
SREBF1-216ENST00000490796 CUEDC1Q9NWM3 386 aaPredicted RBP18.91■□□□□ 0.62
SREBF1-216ENST00000490796 IL1RAPL1Q9NZN1 696 aa18.91■□□□□ 0.62
SREBF1-216ENST00000490796 PLEKHB1Q9UF11 243 aaPredicted RBP18.91■□□□□ 0.62
SREBF1-216ENST00000490796 FBXL4Q9UKA2 621 aa18.91■□□□□ 0.62
SREBF1-216ENST00000490796 NXT1Q9UKK6 140 aaKnown RBP18.91■□□□□ 0.62
SREBF1-216ENST00000490796 CNTRLQ7Z7A1 2325 aa18.91■□□□□ 0.62
SREBF1-216ENST00000490796 TARM1B6A8C7 271 aa18.9■□□□□ 0.62
SREBF1-216ENST00000490796 SRPX2O60687 465 aaPredicted RBP18.9■□□□□ 0.62
SREBF1-216ENST00000490796 VAPBO95292 243 aa18.9■□□□□ 0.62
SREBF1-216ENST00000490796 C1orf105O95561 183 aa18.9■□□□□ 0.62
SREBF1-216ENST00000490796 ITGAXP20702 1163 aa18.9■□□□□ 0.62
SREBF1-216ENST00000490796 RPS3P23396 243 aaKnown RBP eCLIP18.9■□□□□ 0.623e-7■■■■□ 23.3
SREBF1-216ENST00000490796 MCM3P25205 808 aa18.9■□□□□ 0.62
SREBF1-216ENST00000490796 NMBRP28336 390 aa18.9■□□□□ 0.62
SREBF1-216ENST00000490796 VSX2P58304 361 aaPredicted RBP18.9■□□□□ 0.62
SREBF1-216ENST00000490796 ELOAQ14241 798 aaKnown RBP18.9■□□□□ 0.62
SREBF1-216ENST00000490796 RBBP7Q16576 425 aa18.9■□□□□ 0.62
SREBF1-216ENST00000490796 RNF187Q5TA31 235 aaPredicted RBP18.9■□□□□ 0.62
SREBF1-216ENST00000490796 DRICH1Q6PGQ1 229 aaPredicted RBP18.9■□□□□ 0.62
SREBF1-216ENST00000490796 SNRNP40Q96DI7 357 aaKnown RBP18.9■□□□□ 0.62
SREBF1-216ENST00000490796 MIPEPQ99797 713 aa18.9■□□□□ 0.62
SREBF1-216ENST00000490796 P2RY12Q9H244 342 aa18.9■□□□□ 0.62
SREBF1-216ENST00000490796 WDR54Q9H977 334 aa18.9■□□□□ 0.62
SREBF1-216ENST00000490796 MRM3Q9HC36 420 aaKnown RBP18.9■□□□□ 0.62
SREBF1-216ENST00000490796 SLC22A11Q9NSA0 550 aa18.9■□□□□ 0.62
SREBF1-216ENST00000490796 TREX1Q9NSU2 369 aa18.9■□□□□ 0.62
SREBF1-216ENST00000490796 TSR3Q9UJK0 312 aaKnown RBP18.9■□□□□ 0.62
SREBF1-216ENST00000490796 ZKSCAN5Q9Y2L8 839 aa18.9■□□□□ 0.62
SREBF1-216ENST00000490796 NFS1Q9Y697 457 aa18.9■□□□□ 0.62
SREBF1-216ENST00000490796 H3BMM5 538 aa18.89■□□□□ 0.61
SREBF1-216ENST00000490796 SEMA7AO75326 666 aa18.89■□□□□ 0.61
SREBF1-216ENST00000490796 FGGP02679 453 aa18.89■□□□□ 0.61
SREBF1-216ENST00000490796 ERVK-10P10266 1014 aa18.89■□□□□ 0.61
SREBF1-216ENST00000490796 MGAT1P26572 445 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms