RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ACSBG2Q5FVE4 666 aa30.16■■■□□ 2.42
LDB1-204ENST00000490751 RNASEH2BQ5TBB1 312 aaKnown RBP30.16■■■□□ 2.42
LDB1-204ENST00000490751 DENND1AQ8TEH3 1009 aa30.16■■■□□ 2.42
LDB1-204ENST00000490751 C20orf96Q9NUD7 363 aaPredicted RBP30.16■■■□□ 2.42
LDB1-204ENST00000490751 DHCR7Q9UBM7 475 aaKnown RBP30.16■■■□□ 2.42
LDB1-204ENST00000490751 SRPK3Q9UPE1 567 aa30.16■■■□□ 2.42
LDB1-204ENST00000490751 TENM4Q6N022 2769 aa30.15■■■□□ 2.42
LDB1-204ENST00000490751 ARGFXA6NJG6 315 aa30.15■■■□□ 2.42
LDB1-204ENST00000490751 K7EM74 188 aa30.15■■■□□ 2.42
LDB1-204ENST00000490751 WISP1O95388 367 aa30.15■■■□□ 2.42
LDB1-204ENST00000490751 TCP1P17987 556 aaKnown RBP30.15■■■□□ 2.42
LDB1-204ENST00000490751 PTGIRP43119 386 aa30.15■■■□□ 2.42
LDB1-204ENST00000490751 LONRF1Q17RB8 773 aa30.15■■■□□ 2.42
LDB1-204ENST00000490751 FCRL6Q6DN72 434 aa30.15■■■□□ 2.42
LDB1-204ENST00000490751 TCTN3Q6NUS6 607 aa30.15■■■□□ 2.42
LDB1-204ENST00000490751 MCATQ8IVS2 390 aaKnown RBP30.15■■■□□ 2.42
LDB1-204ENST00000490751 HMGCLL1Q8TB92 370 aa30.15■■■□□ 2.42
LDB1-204ENST00000490751 PROKR1Q8TCW9 393 aa30.15■■■□□ 2.42
LDB1-204ENST00000490751 GBP5Q96PP8 586 aa30.15■■■□□ 2.42
LDB1-204ENST00000490751 TXLNGQ9NUQ3 528 aa30.15■■■□□ 2.42
LDB1-204ENST00000490751 SPATA7Q9P0W8 599 aa30.15■■■□□ 2.42
LDB1-204ENST00000490751 ASIC3Q9UHC3 531 aa30.15■■■□□ 2.42
LDB1-204ENST00000490751 ANAPC2Q9UJX6 822 aa30.15■■■□□ 2.42
LDB1-204ENST00000490751 ATXN8OSP0DMR3 200 aa30.14■■■□□ 2.42
LDB1-204ENST00000490751 PSMB5P28074 263 aa30.14■■■□□ 2.42
LDB1-204ENST00000490751 KLHL38Q2WGJ6 581 aa30.14■■■□□ 2.42
LDB1-204ENST00000490751 FIGLAQ6QHK4 219 aa30.14■■■□□ 2.42
LDB1-204ENST00000490751 C17orf62Q9BQA9 187 aa30.14■■■□□ 2.42
LDB1-204ENST00000490751 NDC1Q9BTX1 674 aa30.14■■■□□ 2.42
LDB1-204ENST00000490751 PADI2Q9Y2J8 665 aa30.14■■■□□ 2.42
LDB1-204ENST00000490751 FKBP9O95302 570 aa30.13■■■□□ 2.41
LDB1-204ENST00000490751 GRIA3P42263 894 aa30.13■■■□□ 2.41
LDB1-204ENST00000490751 SLC1A2P43004 574 aa30.13■■■□□ 2.41
LDB1-204ENST00000490751 CLCN7P51798 805 aa30.13■■■□□ 2.41
LDB1-204ENST00000490751 TLE1Q04724 770 aa30.13■■■□□ 2.41
LDB1-204ENST00000490751 MLIPQ5VWP3 458 aa30.13■■■□□ 2.41
LDB1-204ENST00000490751 LMNTD2Q8IXW0 634 aa30.13■■■□□ 2.41
LDB1-204ENST00000490751 SLC30A3Q99726 388 aa30.13■■■□□ 2.41
LDB1-204ENST00000490751 DHRS4Q9BTZ2 278 aa30.13■■■□□ 2.41
LDB1-204ENST00000490751 EPN3Q9H201 632 aa30.13■■■□□ 2.41
LDB1-204ENST00000490751 CCDC68Q9H2F9 335 aa30.13■■■□□ 2.41
LDB1-204ENST00000490751 ARHGEF33A8MVX0 844 aa30.12■■■□□ 2.41
LDB1-204ENST00000490751 DNALI1O14645 258 aaPredicted RBP30.12■■■□□ 2.41
LDB1-204ENST00000490751 DCDP81605 110 aaKnown RBP30.12■■■□□ 2.41
LDB1-204ENST00000490751 PTK6Q13882 451 aa30.12■■■□□ 2.41
LDB1-204ENST00000490751 TTLL9Q3SXZ7 439 aa30.12■■■□□ 2.41
LDB1-204ENST00000490751 ZC3H12BQ5HYM0 836 aaKnown RBP30.12■■■□□ 2.41
LDB1-204ENST00000490751 EEF1AKMT2Q5JPI9 291 aaKnown RBP30.12■■■□□ 2.41
LDB1-204ENST00000490751 ZNF549Q6P9A3 640 aa30.12■■■□□ 2.41
LDB1-204ENST00000490751 SERBP1Q8NC51 408 aaKnown RBP eCLIP30.12■■■□□ 2.41
LDB1-204ENST00000490751 GIMAP7Q8NHV1 300 aa30.12■■■□□ 2.41
LDB1-204ENST00000490751 CALML6Q8TD86 181 aa30.12■■■□□ 2.41
LDB1-204ENST00000490751 SLCO2A1Q92959 643 aa30.12■■■□□ 2.41
LDB1-204ENST00000490751 MIPEPQ99797 713 aa30.12■■■□□ 2.41
LDB1-204ENST00000490751 ING2Q9H160 280 aa30.12■■■□□ 2.41
LDB1-204ENST00000490751 ACSS2Q9NR19 701 aa30.12■■■□□ 2.41
LDB1-204ENST00000490751 GPN3Q9UHW5 284 aaPredicted RBP30.12■■■□□ 2.41
LDB1-204ENST00000490751 MED16Q9Y2X0 877 aa30.12■■■□□ 2.41
LDB1-204ENST00000490751 CCDC88CQ9P219 2028 aa30.12■■■□□ 2.41
LDB1-204ENST00000490751 MED13Q9UHV7 2174 aa30.11■■■□□ 2.41
LDB1-204ENST00000490751 A0A1W2PPV9 198 aa30.11■■■□□ 2.41
LDB1-204ENST00000490751 CASRP41180 1078 aa30.11■■■□□ 2.41
LDB1-204ENST00000490751 SLC9A5Q14940 896 aa30.11■■■□□ 2.41
LDB1-204ENST00000490751 CYP2A13Q16696 494 aa30.11■■■□□ 2.41
LDB1-204ENST00000490751 ASB18Q6ZVZ8 466 aa30.11■■■□□ 2.41
LDB1-204ENST00000490751 OR9A1PQ8NGU1 263 aa30.11■■■□□ 2.41
LDB1-204ENST00000490751 ANP32BQ92688 251 aaKnown RBP30.11■■■□□ 2.41
LDB1-204ENST00000490751 KCNJ9Q92806 393 aa30.11■■■□□ 2.41
LDB1-204ENST00000490751 IFT80Q9P2H3 777 aaPredicted RBP30.11■■■□□ 2.41
LDB1-204ENST00000490751 PCYOX1Q9UHG3 505 aa30.11■■■□□ 2.41
LDB1-204ENST00000490751 FBXO5Q9UKT4 447 aa30.11■■■□□ 2.41
LDB1-204ENST00000490751 FAM169AQ9Y6X4 670 aa30.11■■■□□ 2.41
LDB1-204ENST00000490751 TNRC6AQ8NDV7 1962 aaKnown RBP30.1■■■□□ 2.41
LDB1-204ENST00000490751 PSIP1O75475 530 aaKnown RBP30.1■■■□□ 2.41
LDB1-204ENST00000490751 KLF7O75840 302 aaPredicted RBP30.1■■■□□ 2.41
LDB1-204ENST00000490751 PGAM1P18669 254 aa30.1■■■□□ 2.41
LDB1-204ENST00000490751 CSRP3P50461 194 aa30.1■■■□□ 2.41
LDB1-204ENST00000490751 MPP1Q00013 466 aa30.1■■■□□ 2.41
LDB1-204ENST00000490751 KCNC4Q03721 635 aa30.1■■■□□ 2.41
LDB1-204ENST00000490751 KLRB1Q12918 225 aa30.1■■■□□ 2.41
LDB1-204ENST00000490751 CUL1Q13616 776 aa30.1■■■□□ 2.41
LDB1-204ENST00000490751 FASTKQ14296 549 aaKnown RBP30.1■■■□□ 2.41
LDB1-204ENST00000490751 COLEC12Q5KU26 742 aa30.1■■■□□ 2.41
LDB1-204ENST00000490751 SPNS2Q8IVW8 549 aa30.1■■■□□ 2.41
LDB1-204ENST00000490751 OR2L3Q8NG85 312 aa30.1■■■□□ 2.41
LDB1-204ENST00000490751 OR2A1Q8NGT9 310 aa30.1■■■□□ 2.41
LDB1-204ENST00000490751 DLG3Q92796 817 aa30.1■■■□□ 2.41
LDB1-204ENST00000490751 ZUFSPQ96AP4 578 aa30.1■■■□□ 2.41
LDB1-204ENST00000490751 CAPZA3Q96KX2 299 aa30.1■■■□□ 2.41
LDB1-204ENST00000490751 FAM167BQ9BTA0 163 aa30.1■■■□□ 2.41
LDB1-204ENST00000490751 CLMPQ9H6B4 373 aa30.1■■■□□ 2.41
LDB1-204ENST00000490751 FAM114A2Q9NRY5 505 aa30.1■■■□□ 2.41
LDB1-204ENST00000490751 NDOR1Q9UHB4 597 aa30.1■■■□□ 2.41
LDB1-204ENST00000490751 TARM1B6A8C7 271 aa30.09■■■□□ 2.41
LDB1-204ENST00000490751 CATP04040 527 aaKnown RBP30.09■■■□□ 2.41
LDB1-204ENST00000490751 PDGFAP04085 211 aa30.09■■■□□ 2.41
LDB1-204ENST00000490751 GCGRP47871 477 aa30.09■■■□□ 2.41
LDB1-204ENST00000490751 CCL11P51671 97 aa30.09■■■□□ 2.41
LDB1-204ENST00000490751 GNG11P61952 73 aa30.09■■■□□ 2.41
LDB1-204ENST00000490751 NKAIN1Q4KMZ8 207 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms