RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 CENPMQ9NSP4 180 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 PPP4R1LQ9P1A2 415 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 POLLQ9UGP5 575 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 BRWD3Q6RI45 1802 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 TUBGCP6Q96RT7 1819 aa2.84□□□□□ -1.95
UBXN4-208ENST00000490163 TAF1LQ8IZX4 1826 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 HSPB2A8KAH6 182 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 YY2O15391 372 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 MAGEB3O15480 346 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 CSO75390 466 aaKnown RBP2.84□□□□□ -1.96
UBXN4-208ENST00000490163 NDUFA7O95182 113 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 ITGB1P05556 798 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 CHRM2P08172 466 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 TPBGLP0DKB5 382 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 DRD1P21728 446 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 BRWD1-AS2P59051 145 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 HSF1Q00613 529 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 RELQ04864 619 aaPredicted RBP2.84□□□□□ -1.96
UBXN4-208ENST00000490163 CRYZQ08257 329 aaKnown RBP2.84□□□□□ -1.96
UBXN4-208ENST00000490163 GRSF1Q12849 480 aaKnown RBP eCLIP2.84□□□□□ -1.96
UBXN4-208ENST00000490163 ITPK1Q13572 414 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 RBBP5Q15291 538 aaKnown RBP2.84□□□□□ -1.96
UBXN4-208ENST00000490163 HSPB2Q16082 182 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 TCTN1Q2MV58 587 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 PROSER3Q2NL68 480 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 TTC19Q6DKK2 380 aaPredicted RBP2.84□□□□□ -1.96
UBXN4-208ENST00000490163 PARGQ86W56 976 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 ADGRG3Q86Y34 549 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 FAM98AQ8NCA5 519 aaKnown RBP2.84□□□□□ -1.96
UBXN4-208ENST00000490163 MYCBPAPQ8TBZ2 947 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 NSMCE1Q8WV22 266 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 HEXDCQ8WVB3 486 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 LPAR1Q92633 364 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 MAP4K1Q92918 833 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 RHBDF1Q96CC6 855 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 LURAP1Q96LR2 239 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 RBM24Q9BX46 236 aaKnown RBP2.84□□□□□ -1.96
UBXN4-208ENST00000490163 ABCG8Q9H221 673 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 GORASP2Q9H8Y8 452 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 ZNF446Q9NWS9 450 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 RNF181Q9P0P0 153 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 TRPC4Q9UBN4 977 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 HOOK1Q9UJC3 728 aaKnown RBP2.84□□□□□ -1.96
UBXN4-208ENST00000490163 AGO2Q9UKV8 859 aaKnown RBP2.84□□□□□ -1.96
UBXN4-208ENST00000490163 AP1M2Q9Y6Q5 423 aa2.84□□□□□ -1.96
UBXN4-208ENST00000490163 A0A0U1RQJ8 604 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 IKBKBO14920 756 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 NDUFB4O95168 129 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 CAVIN2O95810 425 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 SNAI1O95863 264 aaPredicted RBP2.83□□□□□ -1.96
UBXN4-208ENST00000490163 CHRM5P08912 532 aaPredicted RBP2.83□□□□□ -1.96
UBXN4-208ENST00000490163 PFKFB1P16118 471 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 APOBEC3AP31941 199 aaPredicted RBP2.83□□□□□ -1.96
UBXN4-208ENST00000490163 NF2P35240 595 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 PPT1P50897 306 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 RPL23AP62750 156 aaKnown RBP2.83□□□□□ -1.96
UBXN4-208ENST00000490163 TPD52L1Q16890 204 aaPredicted RBP2.83□□□□□ -1.96
UBXN4-208ENST00000490163 ZC2HC1CQ53FD0 456 aaPredicted RBP2.83□□□□□ -1.96
UBXN4-208ENST00000490163 SEL1L3Q68CR1 1132 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 FAM166AQ6J272 317 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 CDH26Q8IXH8 852 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 RAB3IL1Q8TBN0 382 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 WBP2Q969T9 261 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 OR6C1Q96RD1 312 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 OLFM1Q99784 485 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 SH3GL3Q99963 347 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 KRTAP3-1Q9BYR8 98 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 HIPK3Q9H422 1215 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 RWDD1Q9H446 243 aaPredicted RBP2.83□□□□□ -1.96
UBXN4-208ENST00000490163 SPATA7Q9P0W8 599 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 NCDNQ9UBB6 729 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 LCMT1Q9UIC8 334 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 SMC3Q9UQE7 1217 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 WDR37Q9Y2I8 494 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 AAR2Q9Y312 384 aaKnown RBP2.83□□□□□ -1.96
UBXN4-208ENST00000490163 RIPK3Q9Y572 518 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 A0A1B0GUL6 1792 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 EMSYQ7Z589 1322 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 KIF24Q5T7B8 1368 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 TMEM129A0AVI4 362 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 SLC28A1O00337 649 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 E2F3O00716 465 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 SOCS6O14544 535 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 VPS4BO75351 444 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 WISP2O76076 250 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 CRYGCP07315 174 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 PCNAP12004 261 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 EPORP19235 508 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 EEF1B2P24534 225 aaKnown RBP2.83□□□□□ -1.96
UBXN4-208ENST00000490163 YWHAQP27348 245 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 CDH13P55290 713 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 RWDD2BP57060 319 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 BEX3Q00994 111 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 DSC1Q08554 894 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 TRAF1Q13077 416 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 COL28A1Q2UY09 1125 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 SYTL3Q4VX76 610 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 ANKRD40Q6AI12 368 aa2.83□□□□□ -1.96
UBXN4-208ENST00000490163 METTL2BQ6P1Q9 378 aaKnown RBP2.83□□□□□ -1.96
UBXN4-208ENST00000490163 CD300LGQ6UXG3 332 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms