RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 DDX25Q9UHL0 483 aaKnown RBP4.51□□□□□ -1.69
CCDC39-206ENST00000489868 STUB1Q9UNE7 303 aa4.51□□□□□ -1.69
CCDC39-206ENST00000489868 PPP2R2CQ9Y2T4 447 aa4.51□□□□□ -1.69
CCDC39-206ENST00000489868 TCRBV21S2A2A0A5A6 115 aa4.5□□□□□ -1.69
CCDC39-206ENST00000489868 EXTL3O43909 919 aa4.5□□□□□ -1.69
CCDC39-206ENST00000489868 TADA2AO75478 443 aa4.5□□□□□ -1.69
CCDC39-206ENST00000489868 DARSP14868 501 aaKnown RBP4.5□□□□□ -1.69
CCDC39-206ENST00000489868 MC5RP33032 325 aa4.5□□□□□ -1.69
CCDC39-206ENST00000489868 MTHFRP42898 656 aa4.5□□□□□ -1.69
CCDC39-206ENST00000489868 ALCAMQ13740 583 aa4.5□□□□□ -1.69
CCDC39-206ENST00000489868 TOMM20Q15388 145 aa4.5□□□□□ -1.69
CCDC39-206ENST00000489868 XKR6Q5GH73 641 aa4.5□□□□□ -1.69
CCDC39-206ENST00000489868 CFAP58Q5T655 872 aa4.5□□□□□ -1.69
CCDC39-206ENST00000489868 C20orf194Q5TEA3 1177 aa4.5□□□□□ -1.69
CCDC39-206ENST00000489868 Q6ZRP5 223 aa4.5□□□□□ -1.69
CCDC39-206ENST00000489868 PRPF39Q86UA1 669 aaKnown RBP4.5□□□□□ -1.69
CCDC39-206ENST00000489868 POGLUT1Q8NBL1 392 aa4.5□□□□□ -1.69
CCDC39-206ENST00000489868 SEPHS2Q99611 448 aa4.5□□□□□ -1.69
CCDC39-206ENST00000489868 THAP2Q9H0W7 228 aa4.5□□□□□ -1.69
CCDC39-206ENST00000489868 FAM207AQ9NSI2 230 aaPredicted RBP4.5□□□□□ -1.69
CCDC39-206ENST00000489868 ANKEF1Q9NU02 776 aa4.5□□□□□ -1.69
CCDC39-206ENST00000489868 TNNQ9UQP3 1299 aa4.5□□□□□ -1.69
CCDC39-206ENST00000489868 EXOGQ9Y2C4 368 aaKnown RBP4.5□□□□□ -1.69
CCDC39-206ENST00000489868 ANGPTL3Q9Y5C1 460 aa4.5□□□□□ -1.69
CCDC39-206ENST00000489868 RPS6KL1Q9Y6S9 549 aa4.5□□□□□ -1.69
CCDC39-206ENST00000489868 A0A1W2PPK0 400 aa4.49□□□□□ -1.69
CCDC39-206ENST00000489868 IPO8O15397 1037 aaKnown RBP4.49□□□□□ -1.69
CCDC39-206ENST00000489868 ARHGEF9O43307 516 aa4.49□□□□□ -1.69
CCDC39-206ENST00000489868 SLCO2B1O94956 709 aa4.49□□□□□ -1.69
CCDC39-206ENST00000489868 MOCS3O95396 460 aa4.49□□□□□ -1.69
CCDC39-206ENST00000489868 DUS4LO95620 317 aaKnown RBP4.49□□□□□ -1.69
CCDC39-206ENST00000489868 LDHCP07864 332 aa4.49□□□□□ -1.69
CCDC39-206ENST00000489868 CD27P26842 260 aa4.49□□□□□ -1.69
CCDC39-206ENST00000489868 RAD52P43351 418 aa4.49□□□□□ -1.69
CCDC39-206ENST00000489868 RPL21P46778 160 aaKnown RBP4.49□□□□□ -1.69
CCDC39-206ENST00000489868 LEPRP48357 1165 aaKnown RBP4.49□□□□□ -1.69
CCDC39-206ENST00000489868 ZNF75DP51815 510 aa4.49□□□□□ -1.69
CCDC39-206ENST00000489868 CTU2Q2VPK5 515 aaKnown RBP4.49□□□□□ -1.69
CCDC39-206ENST00000489868 ERMARDQ5T6L9 678 aa4.49□□□□□ -1.69
CCDC39-206ENST00000489868 C11orf63Q6NUN7 778 aa4.49□□□□□ -1.69
CCDC39-206ENST00000489868 TMEM207Q6UWW9 146 aa4.49□□□□□ -1.69
CCDC39-206ENST00000489868 PTAR1Q7Z6K3 402 aaPredicted RBP4.49□□□□□ -1.69
CCDC39-206ENST00000489868 ZNF614Q8N883 585 aa4.49□□□□□ -1.69
CCDC39-206ENST00000489868 DBF4BQ8NFT6 615 aa4.49□□□□□ -1.69
CCDC39-206ENST00000489868 SECISBP2LQ93073 1101 aaKnown RBP4.49□□□□□ -1.69
CCDC39-206ENST00000489868 LINC00479Q96M42 142 aa4.49□□□□□ -1.69
CCDC39-206ENST00000489868 SLF1Q9BQI6 1058 aa4.49□□□□□ -1.69
CCDC39-206ENST00000489868 FUCA2Q9BTY2 467 aa4.49□□□□□ -1.69
CCDC39-206ENST00000489868 CDK19Q9BWU1 502 aa4.49□□□□□ -1.69
CCDC39-206ENST00000489868 P2RY12Q9H244 342 aa4.49□□□□□ -1.69
CCDC39-206ENST00000489868 Q9H8V8 135 aa4.49□□□□□ -1.69
CCDC39-206ENST00000489868 ZDHHC18Q9NUE0 388 aa4.49□□□□□ -1.69
CCDC39-206ENST00000489868 IL17BQ9UHF5 180 aa4.49□□□□□ -1.69
CCDC39-206ENST00000489868 SLC24A2Q9UI40 661 aa4.49□□□□□ -1.69
CCDC39-206ENST00000489868 WDR83OSQ9Y284 106 aa4.49□□□□□ -1.69
CCDC39-206ENST00000489868 EDDM13A0A1B0GTR0 161 aa4.48□□□□□ -1.69
CCDC39-206ENST00000489868 ANTXRLA6NF34 631 aa4.48□□□□□ -1.69
CCDC39-206ENST00000489868 C2orf81A6NN90 581 aa4.48□□□□□ -1.69
CCDC39-206ENST00000489868 ACSL3O95573 720 aa4.48□□□□□ -1.69
CCDC39-206ENST00000489868 TYMPP19971 482 aa4.48□□□□□ -1.69
CCDC39-206ENST00000489868 CD22P20273 847 aa4.48□□□□□ -1.69
CCDC39-206ENST00000489868 AZGP1P25311 298 aaKnown RBP4.48□□□□□ -1.69
CCDC39-206ENST00000489868 HERV-K104P61576 105 aa4.48□□□□□ -1.69
CCDC39-206ENST00000489868 ITGA7Q13683 1181 aa4.48□□□□□ -1.69
CCDC39-206ENST00000489868 TNIP1Q15025 636 aa4.48□□□□□ -1.69
CCDC39-206ENST00000489868 GPR139Q6DWJ6 353 aa4.48□□□□□ -1.69
CCDC39-206ENST00000489868 CENPVQ7Z7K6 275 aaPredicted RBP4.48□□□□□ -1.69
CCDC39-206ENST00000489868 MYPOPQ86VE0 399 aaPredicted RBP4.48□□□□□ -1.69
CCDC39-206ENST00000489868 ZNF689Q96CS4 500 aaPredicted RBP4.48□□□□□ -1.69
CCDC39-206ENST00000489868 MOCOSQ96EN8 888 aa4.48□□□□□ -1.69
CCDC39-206ENST00000489868 THOC1Q96FV9 657 aaKnown RBP4.48□□□□□ -1.69
CCDC39-206ENST00000489868 MAGED4Q96JG8 741 aa4.48□□□□□ -1.69
CCDC39-206ENST00000489868 C10orf90Q96M02 699 aa4.48□□□□□ -1.69
CCDC39-206ENST00000489868 MUS81Q96NY9 551 aa4.48□□□□□ -1.69
CCDC39-206ENST00000489868 SYT11Q9BT88 431 aa4.48□□□□□ -1.69
CCDC39-206ENST00000489868 MIS12Q9H081 205 aa4.48□□□□□ -1.69
CCDC39-206ENST00000489868 WDR35Q9P2L0 1181 aa4.48□□□□□ -1.69
CCDC39-206ENST00000489868 GRID1Q9ULK0 1009 aa4.48□□□□□ -1.69
CCDC39-206ENST00000489868 WDR37Q9Y2I8 494 aa4.48□□□□□ -1.69
CCDC39-206ENST00000489868 TRBC2A0A5B9 178 aa4.47□□□□□ -1.69
CCDC39-206ENST00000489868 NDUFAF8A1L188 74 aa4.47□□□□□ -1.69
CCDC39-206ENST00000489868 CRLF1O75462 422 aa4.47□□□□□ -1.69
CCDC39-206ENST00000489868 CELF2O95319 508 aaKnown RBP4.47□□□□□ -1.69
CCDC39-206ENST00000489868 LHX1P48742 406 aa4.47□□□□□ -1.69
CCDC39-206ENST00000489868 PPP5CP53041 499 aa4.47□□□□□ -1.69
CCDC39-206ENST00000489868 POLR2LP62875 67 aaKnown RBP4.47□□□□□ -1.69
CCDC39-206ENST00000489868 VEZF1Q14119 521 aa4.47□□□□□ -1.69
CCDC39-206ENST00000489868 LPAL2Q16609 132 aa4.47□□□□□ -1.69
CCDC39-206ENST00000489868 MCMDC2Q4G0Z9 681 aa4.47□□□□□ -1.69
CCDC39-206ENST00000489868 C9orf152Q5JTZ5 239 aa4.47□□□□□ -1.69
CCDC39-206ENST00000489868 SLC25A47Q6Q0C1 308 aa4.47□□□□□ -1.69
CCDC39-206ENST00000489868 CLEC4GQ6UXB4 293 aa4.47□□□□□ -1.69
CCDC39-206ENST00000489868 RAB42Q8N4Z0 105 aa4.47□□□□□ -1.69
CCDC39-206ENST00000489868 KCTD6Q8NC69 237 aa4.47□□□□□ -1.69
CCDC39-206ENST00000489868 OR1L3Q8NH93 324 aa4.47□□□□□ -1.69
CCDC39-206ENST00000489868 ATL1Q8WXF7 558 aa4.47□□□□□ -1.69
CCDC39-206ENST00000489868 ARSGQ96EG1 525 aa4.47□□□□□ -1.69
CCDC39-206ENST00000489868 C18orf12Q96KH6 178 aa4.47□□□□□ -1.69
CCDC39-206ENST00000489868 CPNE1Q99829 537 aa4.47□□□□□ -1.69
CCDC39-206ENST00000489868 CLEC7AQ9BXN2 247 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms