RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 ATP5F1P24539 256 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 HRH2P25021 359 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 SDC4P31431 198 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 FMO3P31513 532 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 ZNF143P52747 638 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 CRADDP78560 199 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 RAPSNQ13702 412 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 KEAP1Q14145 624 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 POU4F3Q15319 338 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 DUSP6Q16828 381 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 KIF19Q2TAC6 998 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 Q3ZCU0 254 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 RUNDC3AQ59EK9 446 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 NOL9Q5SY16 702 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 MPP7Q5T2T1 576 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 MAP1SQ66K74 1059 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 GPAT2Q6NUI2 795 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 RANBP10Q6VN20 620 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 GPRIN3Q6ZVF9 776 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 USP50Q70EL3 339 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 HTR3DQ70Z44 454 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 RRM2BQ7LG56 351 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 TXNRD3Q86VQ6 643 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 NLRP8Q86W28 1048 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 IFNEQ86WN2 208 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 RNF130Q86XS8 419 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 HIPK1Q86Z02 1210 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 TMC8Q8IU68 726 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 ADHFE1Q8IWW8 467 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 TIGD4Q8IY51 512 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 GHDCQ8N2G8 530 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 TTLL6Q8N841 843 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 ARRDC4Q8NCT1 418 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 OR9I1Q8NGQ6 314 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 ZNF431Q8TF32 576 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 COPS5Q92905 334 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 POP5Q969H6 163 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 C19orf60Q96EN9 201 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 ABHD17AQ96GS6 310 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 WDFY2Q96P53 400 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 SIGLEC11Q96RL6 698 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 ACOX2Q99424 681 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 SEC22CQ9BRL7 303 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 LRRC3Q9BY71 257 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 SLC19A3Q9BZV2 496 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 BRINP2Q9C0B6 783 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 RACGAP1Q9H0H5 632 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 LHX5Q9H2C1 402 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 SAV1Q9H4B6 383 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 RANBP3Q9H6Z4 567 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 TRIM45Q9H8W5 580 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 LTB4R2Q9NPC1 389 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 IL1RAPQ9NPH3 570 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 SLC52A3Q9NQ40 469 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 HPF1Q9NWY4 346 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 NSMCE4AQ9NXX6 385 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 COA4Q9NYJ1 87 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 GPRC5BQ9NZH0 403 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 SLC39A10Q9ULF5 831 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 LIPT1Q9Y234 373 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 ACOT9Q9Y305 439 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 DYRK1BQ9Y463 629 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 OAS3Q9Y6K5 1087 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 U3KQV3 271 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 SBF2Q86WG5 1849 aa4.66□□□□□ -1.66
SNRNP40-206ENST00000489853 TNRC6CQ9HCJ0 1690 aaKnown RBP4.65□□□□□ -1.66
SNRNP40-206ENST00000489853 A0A0B4J293 547 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 A0A1W2PP18 115 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 A0A1W2PQ09 198 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 RPS10-NUDT3A0A1W2PQS6 291 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 EFCAB10A6NFE3 127 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 WASH4PA8MWX3 477 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 GNGT2O14610 69 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 ANKRD28O15084 1053 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 OGTO15294 1046 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 BNIP3LO60238 219 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 HUS1O60921 280 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 FAM20BO75063 409 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 TSC22D2O75157 780 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 VPS26AO75436 327 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 CYP7B1O75881 506 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 CST1P01037 141 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 HMGCRP04035 888 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 CDK1P06493 297 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 ANXA6P08133 673 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 CYP19A1P11511 503 aaPredicted RBP4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 SRCP12931 536 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 SLC2A4P14672 509 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 HNRNPLP14866 589 aaKnown RBP eCLIP4.65□□□□□ -1.672e-10■■■■□ 25.5
SNRNP40-206ENST00000489853 CAPN3P20807 821 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 RPS3P23396 243 aaKnown RBP eCLIP4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 HNF1BP35680 557 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 NUP62P37198 522 aaPredicted RBP4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 KIR2DL3P43628 341 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 MRPL19P49406 292 aaKnown RBP4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 GLUD2P49448 558 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 CDKN1CP49918 316 aaPredicted RBP4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 KPNA2P52292 529 aaKnown RBP4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 ARHGDIBP52566 201 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 SNAP25P60880 206 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms