RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 EDIL3O43854 480 aa5.09□□□□□ -1.59
VPS26A-206ENST00000489794 CSN3P07498 182 aa5.09□□□□□ -1.59
VPS26A-206ENST00000489794 CD22P20273 847 aa5.09□□□□□ -1.59
VPS26A-206ENST00000489794 CDH3P22223 829 aa5.09□□□□□ -1.59
VPS26A-206ENST00000489794 TCEA1P23193 301 aaKnown RBP5.09□□□□□ -1.59
VPS26A-206ENST00000489794 PTAFRP25105 342 aa5.09□□□□□ -1.59
VPS26A-206ENST00000489794 CDR2Q01850 454 aa5.09□□□□□ -1.59
VPS26A-206ENST00000489794 PPIGQ13427 754 aaKnown RBP eCLIP5.09□□□□□ -1.59
VPS26A-206ENST00000489794 GFI1BQ5VTD9 330 aa5.09□□□□□ -1.59
VPS26A-206ENST00000489794 LSMEM2Q8N112 164 aa5.09□□□□□ -1.59
VPS26A-206ENST00000489794 SUSD6Q92537 303 aa5.09□□□□□ -1.59
VPS26A-206ENST00000489794 ZNF558Q96NG5 402 aa5.09□□□□□ -1.59
VPS26A-206ENST00000489794 RBM4Q9BWF3 364 aaKnown RBP5.09□□□□□ -1.59
VPS26A-206ENST00000489794 PRRG4Q9BZD6 226 aa5.09□□□□□ -1.59
VPS26A-206ENST00000489794 CHST11Q9NPF2 352 aa5.09□□□□□ -1.59
VPS26A-206ENST00000489794 TXNDC16Q9P2K2 825 aa5.09□□□□□ -1.59
VPS26A-206ENST00000489794 GIMAP2Q9UG22 337 aa5.09□□□□□ -1.59
VPS26A-206ENST00000489794 KIAA1210Q9ULL0 1709 aa5.09□□□□□ -1.6
VPS26A-206ENST00000489794 ENO4A6NNW6 628 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 ARPC2O15144 300 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 GRID2O43424 1007 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 TBCAO75347 108 aaKnown RBP5.08□□□□□ -1.6
VPS26A-206ENST00000489794 AMBPP02760 352 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 PATE4P0C8F1 98 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 JAK1P23458 1154 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 CDC25CP30307 473 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 MAGEA11P43364 429 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 CCR10P46092 362 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 TFCP2Q12800 502 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 RBM39Q14498 530 aaKnown RBP5.08□□□□□ -1.6
VPS26A-206ENST00000489794 NPTX1Q15818 432 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 TMEM30BQ3MIR4 351 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 GTDC1Q4AE62 458 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 TCTE1Q5JU00 501 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 SLC35D3Q5M8T2 416 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 SPDYCQ5MJ68 293 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 KLHDC8BQ8IXV7 354 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 NIPA2Q8N8Q9 360 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 IQUBQ8NA54 791 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 OR11H4Q8NGC9 324 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 OR4K1Q8NGD4 311 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 DYRK2Q92630 601 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 BARHL1Q9BZE3 327 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 FAM207AQ9NSI2 230 aaPredicted RBP5.08□□□□□ -1.6
VPS26A-206ENST00000489794 MAN1B1Q9UKM7 699 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 STUB1Q9UNE7 303 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 LIPGQ9Y5X9 500 aa5.08□□□□□ -1.6
VPS26A-206ENST00000489794 HHLA1C9JL84 531 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 DIAPH2O60879 1101 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 AP2A2O94973 939 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 NADKO95544 446 aaPredicted RBP5.07□□□□□ -1.6
VPS26A-206ENST00000489794 RNF224P0DH78 156 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 CSTF2P33240 577 aaKnown RBP eCLIP5.07□□□□□ -1.6
VPS26A-206ENST00000489794 HSD17B3P37058 310 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 WNT5AP41221 380 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 DLK1P80370 383 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 ZNF415Q09FC8 603 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 ITGA9Q13797 1035 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 VEZF1Q14119 521 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 ZNF273Q14593 569 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 RRS1Q15050 365 aaKnown RBP5.07□□□□□ -1.6
VPS26A-206ENST00000489794 P2RY6Q15077 328 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 PHLDA2Q53GA4 152 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 ARHGEF16Q5VV41 709 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 ARHGAP17Q68EM7 881 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 C11orf57Q6ZUT1 292 aaPredicted RBP5.07□□□□□ -1.6
VPS26A-206ENST00000489794 SLC16A9Q7RTY1 509 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 RASGEF1AQ8N9B8 481 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 NOA1Q8NC60 698 aaKnown RBP5.07□□□□□ -1.6
VPS26A-206ENST00000489794 OR13C3Q8NGS6 347 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 HPSE2Q8WWQ2 592 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 OTUB1Q96FW1 271 aaPredicted RBP5.07□□□□□ -1.6
VPS26A-206ENST00000489794 FAM20AQ96MK3 541 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 FSD1Q9BTV5 496 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 ANKRD2Q9GZV1 360 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 FAM49AQ9H0Q0 323 aaPredicted RBP5.07□□□□□ -1.6
VPS26A-206ENST00000489794 PPANQ9NQ55 473 aaKnown RBP5.07□□□□□ -1.6
VPS26A-206ENST00000489794 GSN-AS1Q9NRJ2 163 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 INTS10Q9NVR2 710 aaKnown RBP5.07□□□□□ -1.6
VPS26A-206ENST00000489794 RNF150Q9ULK6 438 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 RIPK3Q9Y572 518 aa5.07□□□□□ -1.6
VPS26A-206ENST00000489794 MYH14Q7Z406 1995 aaKnown RBP5.06□□□□□ -1.6
VPS26A-206ENST00000489794 TRAV24A0A0B4J272 114 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 ANXA2P2A6NMY6 339 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 AP5Z1O43299 807 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 GLRA3O75311 464 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 LUC7L3O95232 432 aaKnown RBP5.06□□□□□ -1.6
VPS26A-206ENST00000489794 RPL21P46778 160 aaKnown RBP5.06□□□□□ -1.6
VPS26A-206ENST00000489794 B3GALT5-AS1P59052 145 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 PMP22Q01453 160 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 TAF10Q12962 218 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 C6orf136Q5SQH8 315 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 OTUD3Q5T2D3 398 aaPredicted RBP5.06□□□□□ -1.6
VPS26A-206ENST00000489794 FAM53AQ6NSI3 398 aaPredicted RBP5.06□□□□□ -1.6
VPS26A-206ENST00000489794 ENPP7Q6UWV6 458 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 C15orf39Q6ZRI6 1047 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 G2E3Q7L622 706 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 RTN4RL2Q86UN3 420 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 PIGZQ86VD9 579 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 THNSL1Q8IYQ7 743 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms