RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 OR4F21O95013 312 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 CLDN9O95484 217 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 EML2O95834 649 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 ITPKAP23677 461 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 AVPR2P30518 371 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 PKLRP30613 574 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 IDH3AP50213 366 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 RAB28P51157 221 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 BTKQ06187 659 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 SF3A3Q12874 501 aaKnown RBP eCLIP13.72□□□□□ -0.21
VPS26A-205ENST00000489656 TUBB3Q13509 450 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 KIR2DS5Q14953 304 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 ELOCQ15369 112 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 CLEC6AQ6EIG7 209 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 LAYNQ6UX15 382 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 ARMCX6Q7L4S7 300 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 MILR1Q7Z6M3 343 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 SYTL1Q8IYJ3 562 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 SNX31Q8N9S9 440 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 L3MBTL4Q8NA19 623 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 OR4F6Q8NGB9 312 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 ATP6V1E2Q96A05 226 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 PYCR2Q96C36 320 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 OR4K3Q96R72 315 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 MIPEPQ99797 713 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 CCT7Q99832 543 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 EBF4Q9BQW3 602 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 CCDC28BQ9BUN5 200 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 SLC29A3Q9BZD2 475 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 CCDC177Q9NQR7 707 aaPredicted RBP13.72□□□□□ -0.21
VPS26A-205ENST00000489656 ZSCAN32Q9NX65 697 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 ZNF624Q9P2J8 865 aaPredicted RBP13.72□□□□□ -0.21
VPS26A-205ENST00000489656 TDRKHQ9Y2W6 561 aaKnown RBP13.72□□□□□ -0.21
VPS26A-205ENST00000489656 DNAJC15Q9Y5T4 150 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 ZNF318Q5VUA4 2279 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 ARID1BQ8NFD5 2236 aaPredicted RBP13.71□□□□□ -0.21
VPS26A-205ENST00000489656 CABIN1Q9Y6J0 2220 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 EBAG9O00559 213 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 SDHDO14521 159 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 HGSO14964 777 aaPredicted RBP13.71□□□□□ -0.21
VPS26A-205ENST00000489656 HRO43593 1189 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 GPR37L1O60883 481 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 HGFP14210 728 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 GNSP15586 552 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 XRCC1P18887 633 aaPredicted RBP13.71□□□□□ -0.21
VPS26A-205ENST00000489656 HOXD12P35452 270 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 SLC19A1P41440 591 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 CASP2P42575 452 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 DPP6P42658 865 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 CTSKP43235 329 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 DHPSP49366 369 aaPredicted RBP13.71□□□□□ -0.21
VPS26A-205ENST00000489656 CSNK1EP49674 416 aaKnown RBP13.71□□□□□ -0.21
VPS26A-205ENST00000489656 FOXA1P55317 472 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 C21orf59P57076 290 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 HNRNPKP61978 463 aaKnown RBP eCLIP13.71□□□□□ -0.21
VPS26A-205ENST00000489656 PRKG2Q13237 762 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 SRSF5Q13243 272 aaKnown RBP13.71□□□□□ -0.21
VPS26A-205ENST00000489656 TBCCQ15814 346 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 PDCD2Q16342 344 aaPredicted RBP13.71□□□□□ -0.21
VPS26A-205ENST00000489656 SLC9B1Q4ZJI4 515 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 ZNF542PQ5EBM4 170 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 PRRT3Q5FWE3 981 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 LIPJQ5W064 366 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 IYDQ6PHW0 289 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 LCTLQ6UWM7 567 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 TAF8Q7Z7C8 310 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 GKN2Q86XP6 184 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 ZBTB44Q8NCP5 570 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 PPFIBP2Q8ND30 876 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 OR52E1Q8NGJ3 308 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 OR2L8Q8NGY9 312 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 TWIST2Q8WVJ9 160 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 SMPDL3AQ92484 453 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 WDR34Q96EX3 536 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 MED8Q96G25 268 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 KCNA7Q96RP8 456 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 NUF2Q9BZD4 464 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 TWSG1Q9GZX9 223 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 PCBD2Q9H0N5 130 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 EHD1Q9H4M9 534 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 PFDN4Q9NQP4 134 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 SPASTQ9UBP0 616 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 CIDEBQ9UHD4 219 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 PILRBQ9UKJ0 227 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 KCNE2Q9Y6J6 123 aa13.71□□□□□ -0.21
VPS26A-205ENST00000489656 KCNE1BA0A087WTH5 132 aa13.7□□□□□ -0.22
VPS26A-205ENST00000489656 CLGNO14967 610 aa13.7□□□□□ -0.22
VPS26A-205ENST00000489656 DIAPH2O60879 1101 aa13.7□□□□□ -0.22
VPS26A-205ENST00000489656 CRCPO75575 148 aa13.7□□□□□ -0.22
VPS26A-205ENST00000489656 WFS1O76024 890 aa13.7□□□□□ -0.22
VPS26A-205ENST00000489656 CHEK2O96017 543 aa13.7□□□□□ -0.22
VPS26A-205ENST00000489656 JUNP05412 331 aaKnown RBP13.7□□□□□ -0.22
VPS26A-205ENST00000489656 CAPN1P07384 714 aa13.7□□□□□ -0.22
VPS26A-205ENST00000489656 CELA2BP08218 269 aaPredicted RBP13.7□□□□□ -0.22
VPS26A-205ENST00000489656 NPPBP16860 134 aa13.7□□□□□ -0.22
VPS26A-205ENST00000489656 GNAZP19086 355 aa13.7□□□□□ -0.22
VPS26A-205ENST00000489656 UBE2IP63279 158 aaKnown RBP13.7□□□□□ -0.22
VPS26A-205ENST00000489656 ZNF33BQ06732 778 aa13.7□□□□□ -0.22
VPS26A-205ENST00000489656 FASTKQ14296 549 aaKnown RBP13.7□□□□□ -0.22
VPS26A-205ENST00000489656 KRT33BQ14525 404 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms