RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 SEPHS1P49903 392 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 SERPINB8P50452 374 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 PPP2R2AP63151 447 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 IRF9Q00978 393 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 POU4F1Q01851 419 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 SLC18A2Q05940 514 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 FOXM1Q08050 763 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 C19orf57Q0VDD7 668 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 DLG1Q12959 904 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 RPA4Q13156 261 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 SRSF6Q13247 344 aaKnown RBP10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 KRT33BQ14525 404 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 IL11RAQ14626 422 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 KIAA1614Q5VZ46 1190 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 CAPRIN2Q6IMN6 1127 aaKnown RBP10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 PCSK4Q6UW60 755 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 OOSP2Q86WS3 158 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 CENPLQ8N0S6 344 aaPredicted RBP10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 NLGN4XQ8N0W4 816 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 SPDYE1Q8NFV5 336 aaPredicted RBP10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 NLGN4YQ8NFZ3 816 aaPredicted RBP10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 ANKRD49Q8WVL7 239 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 JPH3Q8WXH2 748 aaPredicted RBP10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 KLHL6Q8WZ60 621 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 FAM136AQ96C01 138 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 MTBPQ96DY7 904 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 RMDN2Q96LZ7 410 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 TTC1Q99614 292 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 GPR21Q99679 349 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 CTRCQ99895 268 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 EFHD1Q9BUP0 239 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 SPRY4Q9C004 299 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 KIR3DX1Q9H7L2 352 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 COG4Q9H9E3 785 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 APMAPQ9HDC9 416 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 SEMA5BQ9P283 1151 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 TXNDC16Q9P2K2 825 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 GNPTGQ9UJJ9 305 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 CDYLQ9Y232 598 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 VWA7Q9Y334 891 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 CFAP20Q9Y6A4 193 aaKnown RBP10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 COMMD10Q9Y6G5 202 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 IKBKGQ9Y6K9 419 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 ATRXP46100 2492 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 OR5K3A6NET4 321 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 TLCD2A6NGC4 264 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 F8W8V4 182 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 IFRD1O00458 451 aaPredicted RBP10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 PFDN6O15212 129 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 KIF1CO43896 1103 aaKnown RBP10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 SHOX2O60902 331 aaPredicted RBP10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 STK17BO94768 372 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 C2P06681 752 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 NELFEP18615 380 aaKnown RBP10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 AOAHP28039 575 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 PPARGP37231 505 aaPredicted RBP10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 RAB10P61026 200 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 DMTNQ08495 405 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 ABHD18Q0P651 414 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 ILF2Q12905 390 aaKnown RBP10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 COL9A2Q14055 689 aaPredicted RBP10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 MAP7Q14244 749 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 USP10Q14694 798 aaKnown RBP10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 ARMC6Q6NXE6 501 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 DUS1LQ6P1R4 473 aaKnown RBP10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 NAPRTQ6XQN6 538 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 CDHR3Q6ZTQ4 885 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 FAM92BQ6ZTR7 304 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 KMT5CQ86Y97 462 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 RASGRP3Q8IV61 690 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 CARFQ8N187 725 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 PLD6Q8N2A8 252 aaKnown RBP10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 ESX1Q8N693 406 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 LILRA3Q8N6C8 439 aaPredicted RBP10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 SIDT2Q8NBJ9 832 aaKnown RBP10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 KIAA1143Q96AT1 154 aaPredicted RBP10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 SLC41A2Q96JW4 573 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 UBXN10Q96LJ8 280 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 GPR78Q96P69 363 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 OR6C1Q96RD1 312 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 POPDC3Q9HBV1 291 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 HRASLS2Q9NWW9 162 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 SENP1Q9P0U3 644 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 IKZF3Q9UKT9 509 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 NOVA2Q9UNW9 492 aaKnown RBP10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 DHRS7Q9Y394 339 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 ACTL7BQ9Y614 415 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 LOC400499M0QZD8 3231 aa10.24□□□□□ -0.77
SCAMP4-208ENST00000489554 SLC5A10A0PJK1 596 aa10.23□□□□□ -0.77
SCAMP4-208ENST00000489554 H3BMM5 538 aa10.23□□□□□ -0.77
SCAMP4-208ENST00000489554 GOLGA8RI6L899 631 aa10.23□□□□□ -0.77
SCAMP4-208ENST00000489554 MATN2O00339 956 aa10.23□□□□□ -0.77
SCAMP4-208ENST00000489554 LIN7AO14910 233 aaPredicted RBP10.23□□□□□ -0.77
SCAMP4-208ENST00000489554 TYROBPO43914 113 aa10.23□□□□□ -0.77
SCAMP4-208ENST00000489554 GPC4O75487 556 aa10.23□□□□□ -0.77
SCAMP4-208ENST00000489554 DLGAP3O95886 979 aa10.23□□□□□ -0.77
SCAMP4-208ENST00000489554 FTH1P02794 183 aa10.23□□□□□ -0.77
SCAMP4-208ENST00000489554 PRB1P04280 392 aa10.23□□□□□ -0.77
SCAMP4-208ENST00000489554 OR56A5P0C7T3 313 aa10.23□□□□□ -0.77
SCAMP4-208ENST00000489554 PYGBP11216 843 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms