RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 CCDC107Q8WV48 283 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 PIGBQ92521 554 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 TM9SF4Q92544 642 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 ZNF524Q96C55 264 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 NSL1Q96IY1 281 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 FNBP1Q96RU3 617 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 CCDC3Q9BQI4 270 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 URM1Q9BTM9 101 aaKnown RBP2.96□□□□□ -1.94
CD46-215ENST00000488596 LAT2Q9GZY6 243 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 CDH20Q9HBT6 801 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 DNAJC4Q9NNZ3 241 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 PFDN4Q9NQP4 134 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 POLLQ9UGP5 575 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 ZDHHC2Q9UIJ5 367 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 WDR83OSQ9Y284 106 aa2.96□□□□□ -1.94
CD46-215ENST00000488596 SMCHD1A6NHR9 2005 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 LOC101059948A0A1B0GTJ6 334 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 ERI2A8K979 691 aaKnown RBP2.95□□□□□ -1.94
CD46-215ENST00000488596 RNASEH1O60930 286 aaKnown RBP2.95□□□□□ -1.94
CD46-215ENST00000488596 PRKRAO75569 313 aaKnown RBP2.95□□□□□ -1.94
CD46-215ENST00000488596 DDHD2O94830 711 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 GSRP00390 522 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 CSN3P07498 182 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 INHBAP08476 426 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 EEF1B2P24534 225 aaKnown RBP2.95□□□□□ -1.94
CD46-215ENST00000488596 GSDMDP57764 484 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 GCNT1Q02742 428 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 TAF10Q12962 218 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 SQLEQ14534 574 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 LCE3CQ5T5A8 94 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 SLC35E4Q6ICL7 350 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 DCLRE1AQ6PJP8 1040 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 CEACAM20Q6UY09 585 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 MFSD6Q6ZSS7 791 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 GALNTL5Q7Z4T8 443 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 DCUN1D3Q8IWE4 304 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 LGI2Q8N0V4 545 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 VANGL1Q8TAA9 524 aaPredicted RBP2.95□□□□□ -1.94
CD46-215ENST00000488596 PHLDA1Q8WV24 401 aaPredicted RBP2.95□□□□□ -1.94
CD46-215ENST00000488596 FAM20AQ96MK3 541 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 LRRC3BQ96PB8 259 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 PGLYRP2Q96PD5 576 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 GBP5Q96PP8 586 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 UHRF2Q96PU4 802 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 RAB3IPQ96QF0 476 aaPredicted RBP2.95□□□□□ -1.94
CD46-215ENST00000488596 GTPBP2Q9BX10 602 aaKnown RBP2.95□□□□□ -1.94
CD46-215ENST00000488596 GKN1Q9NS71 199 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 MMP24Q9Y5R2 645 aa2.95□□□□□ -1.94
CD46-215ENST00000488596 SNED1Q8TER0 1413 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 ARHGEF37A1IGU5 675 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 ANXA2P2A6NMY6 339 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 ENO4A6NNW6 628 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 PMS2P5A8MQ11 134 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 ZNF197O14709 1029 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 CLIC2O15247 247 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 SAGP10523 405 aaPredicted RBP2.94□□□□□ -1.94
CD46-215ENST00000488596 SCG2P13521 617 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 EFNA1P20827 205 aaPredicted RBP2.94□□□□□ -1.94
CD46-215ENST00000488596 CDH3P22223 829 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 CD27P26842 260 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 CDC25CP30307 473 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 MAP2K2P36507 400 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 GP5P40197 560 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 CUL3Q13618 768 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 ODF4Q2M2E3 257 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 KIAA1644Q3SXP7 199 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 C6orf136Q5SQH8 315 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 GLRX5Q86SX6 157 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 ISCA2Q86U28 154 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 NUDT13Q86X67 352 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 MMD2Q8IY49 270 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 THNSL1Q8IYQ7 743 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 MAML2Q8IZL2 1156 aaPredicted RBP2.94□□□□□ -1.94
CD46-215ENST00000488596 OR4K1Q8NGD4 311 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 OR10V1Q8NGI7 309 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 SETD6Q8TBK2 473 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 NSMAFQ92636 917 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 FAM71F1Q96KD3 344 aaPredicted RBP2.94□□□□□ -1.94
CD46-215ENST00000488596 SPATA17Q96L03 361 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 MGME1Q9BQP7 344 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 MIS12Q9H081 205 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 XAB2Q9HCS7 855 aaKnown RBP2.94□□□□□ -1.94
CD46-215ENST00000488596 SIX2Q9NPC8 291 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 SLC52A3Q9NQ40 469 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 SH3GLB2Q9NR46 395 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 INTS9Q9NV88 658 aaKnown RBP2.94□□□□□ -1.94
CD46-215ENST00000488596 ADPRHL2Q9NX46 363 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.94□□□□□ -1.94
CD46-215ENST00000488596 KCNJ14Q9UNX9 436 aa2.94□□□□□ -1.94
CD46-215ENST00000488596 HEG1Q9ULI3 1381 aa2.93□□□□□ -1.94
CD46-215ENST00000488596 TRAV34A0A0B4J273 112 aa2.93□□□□□ -1.94
CD46-215ENST00000488596 A0A1B0GVY2 172 aa2.93□□□□□ -1.94
CD46-215ENST00000488596 A0A1W2PN81 502 aa2.93□□□□□ -1.94
CD46-215ENST00000488596 CASTOR2A6NHX0 329 aa2.93□□□□□ -1.94
CD46-215ENST00000488596 FAM86B1E9PN63 330 aa2.93□□□□□ -1.94
CD46-215ENST00000488596 ATP6V0E1O15342 81 aa2.93□□□□□ -1.94
CD46-215ENST00000488596 AMBPP02760 352 aa2.93□□□□□ -1.94
CD46-215ENST00000488596 GBAP04062 536 aa2.93□□□□□ -1.94
CD46-215ENST00000488596 FAM86B2P0C5J1 330 aa2.93□□□□□ -1.94
CD46-215ENST00000488596 CFC1BP0CG36 223 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms