RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 ZNF624Q9P2J8 865 aaPredicted RBP5.79□□□□□ -1.48
CDHR3-213ENST00000488386 CPNE7Q9UBL6 633 aa5.79□□□□□ -1.48
CDHR3-213ENST00000488386 ZFP69BQ9UJL9 534 aa5.79□□□□□ -1.48
CDHR3-213ENST00000488386 DNPEPQ9ULA0 475 aa5.79□□□□□ -1.48
CDHR3-213ENST00000488386 PCDHA3Q9Y5H8 950 aa5.79□□□□□ -1.48
CDHR3-213ENST00000488386 CFAP20Q9Y6A4 193 aaKnown RBP5.79□□□□□ -1.48
CDHR3-213ENST00000488386 SLC30A1Q9Y6M5 507 aa5.79□□□□□ -1.48
CDHR3-213ENST00000488386 GLYATL1P3A0A0U1RQE8 302 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 RGSL1A5PLK6 1076 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 HACD1B0YJ81 288 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 K7ENP7 123 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 CHUKO15111 745 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 DUX1O43812 170 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 METTL18O95568 372 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 VIPP01282 170 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 LIPCP11150 499 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 ETS1P14921 441 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 HMGCLP35914 325 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 FASLGP48023 281 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 ARCN1P48444 511 aaKnown RBP5.78□□□□□ -1.48
CDHR3-213ENST00000488386 RWDD2BP57060 319 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 DCDC1P59894 354 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 UBE2IP63279 158 aaKnown RBP5.78□□□□□ -1.48
CDHR3-213ENST00000488386 NFKB2Q00653 900 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 TMEM115Q12893 351 aaPredicted RBP5.78□□□□□ -1.48
CDHR3-213ENST00000488386 EIF3IQ13347 325 aaKnown RBP5.78□□□□□ -1.48
CDHR3-213ENST00000488386 MPP3Q13368 585 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 NFE2L1Q14494 772 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 MANEAQ5SRI9 462 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 GPRC6AQ5T6X5 926 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 TMEM71Q6P5X7 295 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 INO80CQ6PI98 192 aaPredicted RBP5.78□□□□□ -1.48
CDHR3-213ENST00000488386 FBXO38Q6PIJ6 1188 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 TMEM220Q6QAJ8 160 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 CERS6Q6ZMG9 384 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 FAM92BQ6ZTR7 304 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 UBE2R2Q712K3 238 aaPredicted RBP5.78□□□□□ -1.48
CDHR3-213ENST00000488386 BZW1Q7L1Q6 419 aaKnown RBP5.78□□□□□ -1.48
CDHR3-213ENST00000488386 PEX26Q7Z412 305 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 C11orf96Q7Z7L8 435 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 SLC9B2Q86UD5 537 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 LRRTM4Q86VH4 590 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 THNSL2Q86YJ6 484 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 CDKL3Q8IVW4 592 aaPredicted RBP5.78□□□□□ -1.48
CDHR3-213ENST00000488386 STPG3Q8N7X2 389 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 FAM71DQ8N9W8 422 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 OR4K2Q8NGD2 314 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 OR4D9Q8NGE8 314 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 OR10G6Q8NH81 332 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 ADAMTS17Q8TE56 1095 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 ATG4AQ8WYN0 398 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 EXTL1Q92935 676 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 GRAMD1AQ96CP6 724 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 SGF29Q96ES7 293 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 TGM7Q96PF1 710 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 CCNL2Q96S94 520 aaPredicted RBP5.78□□□□□ -1.48
CDHR3-213ENST00000488386 TACO1Q9BSH4 297 aaKnown RBP5.78□□□□□ -1.48
CDHR3-213ENST00000488386 ANP32EQ9BTT0 268 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 FSD1LQ9BXM9 530 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 DPH1Q9BZG8 443 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 SARS2Q9NP81 518 aaKnown RBP5.78□□□□□ -1.48
CDHR3-213ENST00000488386 SLC39A1Q9NY26 324 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 IL17CQ9P0M4 197 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 AMFRQ9UKV5 643 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.78□□□□□ -1.48
CDHR3-213ENST00000488386 PCDHGA7Q9Y5G6 932 aa5.78□□□□□ -1.48
CDHR3-213ENST00000488386 MGAQ8IWI9 3026 aa5.77□□□□□ -1.49
CDHR3-213ENST00000488386 OR51F1A6NGY5 319 aa5.77□□□□□ -1.49
CDHR3-213ENST00000488386 TMX2-CTNND1H3BSU7 103 aa5.77□□□□□ -1.49
CDHR3-213ENST00000488386 KMOO15229 486 aa5.77□□□□□ -1.49
CDHR3-213ENST00000488386 NVLO15381 856 aaKnown RBP5.77□□□□□ -1.49
CDHR3-213ENST00000488386 STX7O15400 261 aaKnown RBP5.77□□□□□ -1.49
CDHR3-213ENST00000488386 POP7O75817 140 aaKnown RBP5.77□□□□□ -1.49
CDHR3-213ENST00000488386 IPO7O95373 1038 aaKnown RBP5.77□□□□□ -1.49
CDHR3-213ENST00000488386 PTMAP06454 111 aaKnown RBP5.77□□□□□ -1.49
CDHR3-213ENST00000488386 POLBP06746 335 aa5.77□□□□□ -1.49
CDHR3-213ENST00000488386 ENO2P09104 434 aaPredicted RBP5.77□□□□□ -1.49
CDHR3-213ENST00000488386 AMD1P17707 334 aa5.77□□□□□ -1.49
CDHR3-213ENST00000488386 HLA-DPA1P20036 260 aa5.77□□□□□ -1.49
CDHR3-213ENST00000488386 AKT1P31749 480 aa5.77□□□□□ -1.49
CDHR3-213ENST00000488386 CSTF2P33240 577 aaKnown RBP eCLIP5.77□□□□□ -1.491e-6■■■■■ 28.9
CDHR3-213ENST00000488386 ADRA1AP35348 466 aa5.77□□□□□ -1.49
CDHR3-213ENST00000488386 TNNT3P45378 269 aaPredicted RBP5.77□□□□□ -1.49
CDHR3-213ENST00000488386 GPR3P46089 330 aa5.77□□□□□ -1.49
CDHR3-213ENST00000488386 CLCNKAP51800 687 aa5.77□□□□□ -1.49
CDHR3-213ENST00000488386 TERF1P54274 439 aa5.77□□□□□ -1.49
CDHR3-213ENST00000488386 GEMP55040 296 aa5.77□□□□□ -1.49
CDHR3-213ENST00000488386 FOXM1Q08050 763 aa5.77□□□□□ -1.49
CDHR3-213ENST00000488386 MSLNQ13421 630 aaPredicted RBP5.77□□□□□ -1.49
CDHR3-213ENST00000488386 XRCC4Q13426 336 aa5.77□□□□□ -1.49
CDHR3-213ENST00000488386 SNX1Q13596 522 aa5.77□□□□□ -1.49
CDHR3-213ENST00000488386 PEX6Q13608 980 aa5.77□□□□□ -1.49
CDHR3-213ENST00000488386 GTF2H3Q13889 308 aa5.77□□□□□ -1.49
CDHR3-213ENST00000488386 GPR18Q14330 331 aa5.77□□□□□ -1.49
CDHR3-213ENST00000488386 LINC00303Q3SY05 128 aa5.77□□□□□ -1.49
CDHR3-213ENST00000488386 CCDC38Q502W7 563 aa5.77□□□□□ -1.49
CDHR3-213ENST00000488386 COLEC12Q5KU26 742 aa5.77□□□□□ -1.49
CDHR3-213ENST00000488386 FNBP1LQ5T0N5 605 aa5.77□□□□□ -1.49
CDHR3-213ENST00000488386 ATP1A1-AS1Q5TC04 95 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms