RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 ACTR3BQ9P1U1 418 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 FBXO5Q9UKT4 447 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 COL4A2P08572 1712 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 TSPAN11A1L157 253 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 CD3EAPO15446 510 aaKnown RBP13.38□□□□□ -0.27
COPS7B-221ENST00000488111 BCAS1O75363 584 aaPredicted RBP13.38□□□□□ -0.27
COPS7B-221ENST00000488111 SNAP29O95721 258 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 COL9A1P20849 921 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 PGGT1BP53609 377 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 PLA2G16P53816 162 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 PLCL1Q15111 1095 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 PPP1R3AQ16821 1122 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 SDE2Q6IQ49 451 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 PRMT9Q6P2P2 845 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 FAM151BQ6UXP7 276 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 SLC16A12Q6ZSM3 486 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 ZC3HC1Q86WB0 502 aaKnown RBP13.38□□□□□ -0.27
COPS7B-221ENST00000488111 CNTN4Q8IWV2 1026 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 RPLP0P6Q8NHW5 317 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 PEX13Q92968 403 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 RHOJQ9H4E5 214 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 PARVBQ9HBI1 364 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 DKK3Q9UBP4 350 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 CD84Q9UIB8 345 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 RIMKLBQ9ULI2 386 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 DUSP12Q9UNI6 340 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 BBIP1A8MTZ0 92 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 H0Y858 1186 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 MID1O15344 667 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 GFAPP14136 432 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 HOXB2P14652 356 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 BPIP17213 487 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 SAT1P21673 171 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 TCEA1P23193 301 aaKnown RBP13.37□□□□□ -0.27
COPS7B-221ENST00000488111 ITGB7P26010 798 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 CAMK2GQ13555 558 aaPredicted RBP13.37□□□□□ -0.27
COPS7B-221ENST00000488111 ARHGEF7Q14155 803 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 USP10Q14694 798 aaKnown RBP13.37□□□□□ -0.27
COPS7B-221ENST00000488111 ZRANB3Q5FWF4 1079 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 PLEKHG7Q6ZR37 379 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 DSG4Q86SJ6 1040 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 RETREG3Q86VR2 466 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 CILP2Q8IUL8 1156 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 FUNDC1Q8IVP5 155 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 SPNS2Q8IVW8 549 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 MFSD4AQ8N468 514 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 C2CD4AQ8NCU7 369 aaPredicted RBP13.37□□□□□ -0.27
COPS7B-221ENST00000488111 HOPXQ9BPY8 73 aaPredicted RBP13.37□□□□□ -0.27
COPS7B-221ENST00000488111 WRAP53Q9BUR4 548 aaKnown RBP13.37□□□□□ -0.27
COPS7B-221ENST00000488111 MKRN2Q9H000 416 aaKnown RBP13.37□□□□□ -0.27
COPS7B-221ENST00000488111 DYRK4Q9NR20 520 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 CATSPERZQ9NTU4 200 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 INTS10Q9NVR2 710 aaKnown RBP13.37□□□□□ -0.27
COPS7B-221ENST00000488111 C1QTNF3-AMACRE9PGA6 284 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 B4GAT1O43505 415 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 GMNNO75496 209 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 C1SP09871 688 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 EEF1B2P24534 225 aaKnown RBP13.37□□□□□ -0.27
COPS7B-221ENST00000488111 ELK4P28324 431 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 VIPR1P32241 457 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 TPTEP56180 551 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 MLF2Q15773 248 aaPredicted RBP13.37□□□□□ -0.27
COPS7B-221ENST00000488111 TIGD2Q4W5G0 525 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 PSAPL1Q6NUJ1 521 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 PIWIL3Q7Z3Z3 882 aaKnown RBP13.37□□□□□ -0.27
COPS7B-221ENST00000488111 HSD11B1LQ7Z5J1 315 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 PIANPQ8IYJ0 282 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 AFAP1L2Q8N4X5 818 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 PAPD5Q8NDF8 572 aaKnown RBP13.37□□□□□ -0.27
COPS7B-221ENST00000488111 GPR26Q8NDV2 337 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 OR9I1Q8NGQ6 314 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 NDEL1Q9GZM8 345 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 NSMCE4AQ9NXX6 385 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 ENPP5Q9UJA9 477 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 CRYL1Q9Y2S2 319 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 DGKBQ9Y6T7 804 aa13.37□□□□□ -0.27
COPS7B-221ENST00000488111 A0A1W2PQF6 199 aa13.36□□□□□ -0.27
COPS7B-221ENST00000488111 NPC1O15118 1278 aa13.36□□□□□ -0.27
COPS7B-221ENST00000488111 GPC4O75487 556 aa13.36□□□□□ -0.27
COPS7B-221ENST00000488111 CYP2A6P11509 494 aaPredicted RBP13.36□□□□□ -0.27
COPS7B-221ENST00000488111 ADRB3P13945 408 aa13.36□□□□□ -0.27
COPS7B-221ENST00000488111 GLULP15104 373 aa13.36□□□□□ -0.27
COPS7B-221ENST00000488111 CA5AP35218 305 aa13.36□□□□□ -0.27
COPS7B-221ENST00000488111 IFITM2Q01629 132 aa13.36□□□□□ -0.27
COPS7B-221ENST00000488111 CNTN1Q12860 1018 aa13.36□□□□□ -0.27
COPS7B-221ENST00000488111 CCINQ13939 588 aa13.36□□□□□ -0.27
COPS7B-221ENST00000488111 MFSD4BQ5TF39 518 aa13.36□□□□□ -0.27
COPS7B-221ENST00000488111 AFTPHQ6ULP2 937 aa13.36□□□□□ -0.27
COPS7B-221ENST00000488111 MINDY1Q8N5J2 469 aa13.36□□□□□ -0.27
COPS7B-221ENST00000488111 CALML6Q8TD86 181 aa13.36□□□□□ -0.27
COPS7B-221ENST00000488111 MAGEE2Q8TD90 523 aaPredicted RBP13.36□□□□□ -0.27
COPS7B-221ENST00000488111 HCAR2Q8TDS4 363 aa13.36□□□□□ -0.27
COPS7B-221ENST00000488111 PPP1R16AQ96I34 528 aa13.36□□□□□ -0.27
COPS7B-221ENST00000488111 GABRG3Q99928 467 aa13.36□□□□□ -0.27
COPS7B-221ENST00000488111 FUNDC2Q9BWH2 189 aa13.36□□□□□ -0.27
COPS7B-221ENST00000488111 RSPH9Q9H1X1 276 aaPredicted RBP13.36□□□□□ -0.27
COPS7B-221ENST00000488111 MRPL46Q9H2W6 279 aaKnown RBP13.36□□□□□ -0.27
COPS7B-221ENST00000488111 IL26Q9NPH9 171 aa13.36□□□□□ -0.27
COPS7B-221ENST00000488111 ARPC2O15144 300 aa13.36□□□□□ -0.27
COPS7B-221ENST00000488111 SPINT1O43278 529 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms