RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 HMGCLP35914 325 aa14.45□□□□□ -0.1
U2AF1-211ENST00000486519 CHRNA4P43681 627 aa14.45□□□□□ -0.1
U2AF1-211ENST00000486519 CARSP49589 748 aaKnown RBP14.45□□□□□ -0.1
U2AF1-211ENST00000486519 ARSFP54793 590 aa14.45□□□□□ -0.1
U2AF1-211ENST00000486519 FANCCQ00597 558 aa14.45□□□□□ -0.1
U2AF1-211ENST00000486519 SLC25A11Q02978 314 aaKnown RBP14.45□□□□□ -0.1
U2AF1-211ENST00000486519 FASTKQ14296 549 aaKnown RBP14.45□□□□□ -0.1
U2AF1-211ENST00000486519 GALNTL5Q7Z4T8 443 aa14.45□□□□□ -0.1
U2AF1-211ENST00000486519 CPNE8Q86YQ8 564 aa14.45□□□□□ -0.1
U2AF1-211ENST00000486519 HSCBQ8IWL3 235 aa14.45□□□□□ -0.1
U2AF1-211ENST00000486519 HM13Q8TCT9 377 aa14.45□□□□□ -0.1
U2AF1-211ENST00000486519 ASB5Q8WWX0 329 aa14.45□□□□□ -0.1
U2AF1-211ENST00000486519 COX4I2Q96KJ9 171 aa14.45□□□□□ -0.1
U2AF1-211ENST00000486519 LINC00615Q96LM1 132 aaPredicted RBP14.45□□□□□ -0.1
U2AF1-211ENST00000486519 CCM2Q9BSQ5 444 aa14.45□□□□□ -0.1
U2AF1-211ENST00000486519 COG4Q9H9E3 785 aa14.45□□□□□ -0.1
U2AF1-211ENST00000486519 UBP1Q9NZI7 540 aa14.45□□□□□ -0.1
U2AF1-211ENST00000486519 DNAJC13O75165 2243 aa14.44□□□□□ -0.1
U2AF1-211ENST00000486519 A0A1B0GTH9 108 aa14.44□□□□□ -0.1
U2AF1-211ENST00000486519 GOLGA6L4A6NEF3 574 aa14.44□□□□□ -0.1
U2AF1-211ENST00000486519 A8MUI8 341 aa14.44□□□□□ -0.1
U2AF1-211ENST00000486519 ATP1A3P13637 1013 aa14.44□□□□□ -0.1
U2AF1-211ENST00000486519 PCK1P35558 622 aa14.44□□□□□ -0.1
U2AF1-211ENST00000486519 CD96P40200 585 aa14.44□□□□□ -0.1
U2AF1-211ENST00000486519 NUP107P57740 925 aa14.44□□□□□ -0.1
U2AF1-211ENST00000486519 SHISA5Q8N114 240 aa14.44□□□□□ -0.1
U2AF1-211ENST00000486519 VWA5B2Q8N398 1253 aa14.44□□□□□ -0.1
U2AF1-211ENST00000486519 CPSF7Q8N684 471 aaKnown RBP14.44□□□□□ -0.1
U2AF1-211ENST00000486519 FAM57AQ8TBR7 257 aa14.44□□□□□ -0.1
U2AF1-211ENST00000486519 VPS50Q96JG6 964 aa14.44□□□□□ -0.1
U2AF1-211ENST00000486519 BTBD6Q96KE9 485 aa14.44□□□□□ -0.1
U2AF1-211ENST00000486519 SYT11Q9BT88 431 aa14.44□□□□□ -0.1
U2AF1-211ENST00000486519 DMRT3Q9NQL9 472 aa14.44□□□□□ -0.1
U2AF1-211ENST00000486519 SMOXQ9NWM0 555 aa14.44□□□□□ -0.1
U2AF1-211ENST00000486519 HIVEP2P31629 2446 aa14.44□□□□□ -0.1
U2AF1-211ENST00000486519 IDSB3KWA1 339 aa14.43□□□□□ -0.1
U2AF1-211ENST00000486519 H7C1Q1 480 aa14.43□□□□□ -0.1
U2AF1-211ENST00000486519 NRP2O60462 931 aa14.43□□□□□ -0.1
U2AF1-211ENST00000486519 NDST3O95803 873 aa14.43□□□□□ -0.1
U2AF1-211ENST00000486519 RAF1P04049 648 aa14.43□□□□□ -0.1
U2AF1-211ENST00000486519 SYCP1Q15431 976 aa14.43□□□□□ -0.1
U2AF1-211ENST00000486519 OR1C1Q15619 314 aa14.43□□□□□ -0.1
U2AF1-211ENST00000486519 TPD52L1Q16890 204 aaPredicted RBP14.43□□□□□ -0.1
U2AF1-211ENST00000486519 BOLA3Q53S33 107 aa14.43□□□□□ -0.1
U2AF1-211ENST00000486519 CCDC122Q5T0U0 273 aa14.43□□□□□ -0.1
U2AF1-211ENST00000486519 ERICH6BQ5W0A0 696 aa14.43□□□□□ -0.1
U2AF1-211ENST00000486519 RIPOR1Q6ZS17 1223 aa14.43□□□□□ -0.1
U2AF1-211ENST00000486519 CAMKMTQ7Z624 323 aa14.43□□□□□ -0.1
U2AF1-211ENST00000486519 IMMP1LQ96LU5 166 aa14.43□□□□□ -0.1
U2AF1-211ENST00000486519 XPO4Q9C0E2 1151 aaKnown RBP14.43□□□□□ -0.1
U2AF1-211ENST00000486519 MVB12BQ9H7P6 319 aa14.43□□□□□ -0.1
U2AF1-211ENST00000486519 CRIM1Q9NZV1 1036 aa14.43□□□□□ -0.1
U2AF1-211ENST00000486519 GNPTGQ9UJJ9 305 aa14.43□□□□□ -0.1
U2AF1-211ENST00000486519 MPDZO75970 2070 aa14.43□□□□□ -0.1
U2AF1-211ENST00000486519 ZNF407Q9C0G0 2248 aa14.42□□□□□ -0.1
U2AF1-211ENST00000486519 IGHV3-20A0A0C4DH32 117 aa14.42□□□□□ -0.1
U2AF1-211ENST00000486519 ISM1B1AKI9 464 aa14.42□□□□□ -0.1
U2AF1-211ENST00000486519 SMAD7O15105 426 aaKnown RBP14.42□□□□□ -0.1
U2AF1-211ENST00000486519 EEF1DP29692 281 aaKnown RBP14.42□□□□□ -0.1
U2AF1-211ENST00000486519 PRLHRP49683 370 aa14.42□□□□□ -0.1
U2AF1-211ENST00000486519 EMP2P54851 167 aa14.42□□□□□ -0.1
U2AF1-211ENST00000486519 PMPCAQ10713 525 aa14.42□□□□□ -0.1
U2AF1-211ENST00000486519 DPYSL3Q14195 570 aa14.42□□□□□ -0.1
U2AF1-211ENST00000486519 KRT81Q14533 505 aa14.42□□□□□ -0.1
U2AF1-211ENST00000486519 EMC4Q5J8M3 183 aa14.42□□□□□ -0.1
U2AF1-211ENST00000486519 KDELC1Q6UW63 502 aa14.42□□□□□ -0.1
U2AF1-211ENST00000486519 NAPRTQ6XQN6 538 aa14.42□□□□□ -0.1
U2AF1-211ENST00000486519 LIX1LQ8IVB5 337 aa14.42□□□□□ -0.1
U2AF1-211ENST00000486519 C2orf73Q8N5S3 287 aaPredicted RBP14.42□□□□□ -0.1
U2AF1-211ENST00000486519 PQLC3Q8N755 202 aa14.42□□□□□ -0.1
U2AF1-211ENST00000486519 CCNYQ8ND76 341 aa14.42□□□□□ -0.1
U2AF1-211ENST00000486519 FAM71BQ8TC56 605 aa14.42□□□□□ -0.1
U2AF1-211ENST00000486519 ZNF398Q8TD17 642 aa14.42□□□□□ -0.1
U2AF1-211ENST00000486519 DTX3LQ8TDB6 740 aa14.42□□□□□ -0.1
U2AF1-211ENST00000486519 RND1Q92730 232 aa14.42□□□□□ -0.1
U2AF1-211ENST00000486519 TFGQ92734 400 aaPredicted RBP14.42□□□□□ -0.1
U2AF1-211ENST00000486519 ZNF285Q96NJ3 590 aa14.42□□□□□ -0.1
U2AF1-211ENST00000486519 ZNF700Q9H0M5 742 aa14.42□□□□□ -0.1
U2AF1-211ENST00000486519 ZNF304Q9HCX3 659 aa14.42□□□□□ -0.1
U2AF1-211ENST00000486519 RIC8BQ9NVN3 520 aa14.42□□□□□ -0.1
U2AF1-211ENST00000486519 ZNF282Q9UDV7 671 aaPredicted RBP14.42□□□□□ -0.1
U2AF1-211ENST00000486519 IGLV3-12A0A075B6K2 115 aa14.41□□□□□ -0.1
U2AF1-211ENST00000486519 MLYCDO95822 493 aa14.41□□□□□ -0.1
U2AF1-211ENST00000486519 PTGS2P35354 604 aa14.41□□□□□ -0.1
U2AF1-211ENST00000486519 RFC3P40938 356 aa14.41□□□□□ -0.1
U2AF1-211ENST00000486519 IFI35P80217 286 aaPredicted RBP14.41□□□□□ -0.1
U2AF1-211ENST00000486519 OCA2Q04671 838 aa14.41□□□□□ -0.1
U2AF1-211ENST00000486519 ARSKQ6UWY0 536 aa14.41□□□□□ -0.1
U2AF1-211ENST00000486519 CLYBLQ8N0X4 340 aa14.41□□□□□ -0.1
U2AF1-211ENST00000486519 GOT1L1Q8NHS2 421 aaPredicted RBP14.41□□□□□ -0.1
U2AF1-211ENST00000486519 MYO1AQ9UBC5 1043 aa14.41□□□□□ -0.1
U2AF1-211ENST00000486519 TDRKHQ9Y2W6 561 aaKnown RBP14.41□□□□□ -0.1
U2AF1-211ENST00000486519 LOC102723996A0A087X1L8 192 aa14.4□□□□□ -0.1
U2AF1-211ENST00000486519 FITM1A5D6W6 292 aa14.4□□□□□ -0.1
U2AF1-211ENST00000486519 IFRD1O00458 451 aaPredicted RBP14.4□□□□□ -0.1
U2AF1-211ENST00000486519 CTSVO60911 334 aa14.4□□□□□ -0.1
U2AF1-211ENST00000486519 NEURL1O76050 574 aa14.4□□□□□ -0.1
U2AF1-211ENST00000486519 SEC24DO94855 1032 aaPredicted RBP14.4□□□□□ -0.1
U2AF1-211ENST00000486519 MYBL2P10244 700 aa14.4□□□□□ -0.1
U2AF1-211ENST00000486519 SHMT2P34897 504 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms