RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 GRAMD1AQ96CP6 724 aa11.02□□□□□ -0.65
NUP50-216ENST00000486184 CCDC74BQ96LY2 380 aa11.02□□□□□ -0.65
NUP50-216ENST00000486184 STMN4Q9H169 189 aaPredicted RBP11.02□□□□□ -0.65
NUP50-216ENST00000486184 CCDC177Q9NQR7 707 aaPredicted RBP11.02□□□□□ -0.65
NUP50-216ENST00000486184 IGSF5Q9NSI5 407 aa11.02□□□□□ -0.65
NUP50-216ENST00000486184 WWOXQ9NZC7 414 aa11.02□□□□□ -0.65
NUP50-216ENST00000486184 NUDT4Q9NZJ9 180 aa11.02□□□□□ -0.65
NUP50-216ENST00000486184 STOX2Q9P2F5 926 aaPredicted RBP11.02□□□□□ -0.65
NUP50-216ENST00000486184 EPHA6Q9UF33 1036 aa11.02□□□□□ -0.65
NUP50-216ENST00000486184 LGALS13Q9UHV8 139 aa11.02□□□□□ -0.65
NUP50-216ENST00000486184 IKZF3Q9UKT9 509 aa11.02□□□□□ -0.65
NUP50-216ENST00000486184 POMT2Q9UKY4 750 aa11.02□□□□□ -0.65
NUP50-216ENST00000486184 DMXL1Q9Y485 3027 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 SPTBN4Q9H254 2564 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 IGHV5-10-1A0A0J9YXX1 117 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 A0A1W2PPM1 405 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 COPEO14579 308 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 CASC3O15234 703 aaKnown RBP11.01□□□□□ -0.65
NUP50-216ENST00000486184 TOX3O15405 576 aaPredicted RBP11.01□□□□□ -0.65
NUP50-216ENST00000486184 GLRA3O75311 464 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 CCNDBP1O95273 360 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 C9P02748 559 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 GSTA1P08263 222 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 THRAP10827 490 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 GFAPP14136 432 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 H2AFXP16104 143 aaPredicted RBP11.01□□□□□ -0.65
NUP50-216ENST00000486184 UGT2B7P16662 529 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 IMPA1P29218 277 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 OAS2P29728 719 aaKnown RBP11.01□□□□□ -0.65
NUP50-216ENST00000486184 PRDX3P30048 256 aaKnown RBP11.01□□□□□ -0.65
NUP50-216ENST00000486184 CCKBRP32239 447 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 CSTF2P33240 577 aaKnown RBP eCLIP11.01□□□□□ -0.65
NUP50-216ENST00000486184 CCT5P48643 541 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 HNMTP50135 292 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 CSRP3P50461 194 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 CLDN6P56747 220 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 NAA25Q14CX7 972 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 TGFBIQ15582 683 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 OR4D1Q15615 310 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 SF1Q15637 639 aaKnown RBP11.01□□□□□ -0.65
NUP50-216ENST00000486184 CYP2A13Q16696 494 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 PPP1R3AQ16821 1122 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 ISXQ2M1V0 245 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 CAPN13Q6MZZ7 669 aaPredicted RBP11.01□□□□□ -0.65
NUP50-216ENST00000486184 AGTRAPQ6RW13 159 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 SPESP1Q6UW49 350 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 SUSD1Q6UWL2 747 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 MBOAT1Q6ZNC8 495 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 HDXQ7Z353 690 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 RAB44Q7Z6P3 723 aaPredicted RBP11.01□□□□□ -0.65
NUP50-216ENST00000486184 RASGRP3Q8IV61 690 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 SRRM1Q8IYB3 904 aaKnown RBP11.01□□□□□ -0.65
NUP50-216ENST00000486184 IQCKQ8N0W5 287 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 CYP4X1Q8N118 509 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 CARFQ8N187 725 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 GOLGA6L1Q8N7Z2 621 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 LINC01555Q8NAE3 123 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 PPFIBP2Q8ND30 876 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 RHEBL1Q8TAI7 183 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 HMGCLL1Q8TB92 370 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 DENND1AQ8TEH3 1009 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 MZB1Q8WU39 189 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 ZNF480Q8WV37 535 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 DLG3Q92796 817 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 PTERQ96BW5 349 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 FBXL8Q96CD0 374 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 SMC6Q96SB8 1091 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 NRTNQ99748 197 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 MENTQ9BUN1 341 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 ATG10Q9H0Y0 220 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 SEMA6CQ9H3T2 930 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 CNOT10Q9H9A5 744 aaKnown RBP11.01□□□□□ -0.65
NUP50-216ENST00000486184 INTS7Q9NVH2 962 aaKnown RBP11.01□□□□□ -0.65
NUP50-216ENST00000486184 SOHLH2Q9NX45 425 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 SPHK1Q9NYA1 384 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 EURLQ9NYK6 297 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 TMEM9Q9P0T7 183 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 CPSF2Q9P2I0 782 aaKnown RBP11.01□□□□□ -0.65
NUP50-216ENST00000486184 DCDC2Q9UHG0 476 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 PCDHB11Q9Y5F2 797 aa11.01□□□□□ -0.65
NUP50-216ENST00000486184 A0A0J9YY10 115 aa11□□□□□ -0.65
NUP50-216ENST00000486184 AGRPO00253 132 aa11□□□□□ -0.65
NUP50-216ENST00000486184 HGSO14964 777 aaPredicted RBP11□□□□□ -0.65
NUP50-216ENST00000486184 SMIM24O75264 130 aa11□□□□□ -0.65
NUP50-216ENST00000486184 FKBP9O95302 570 aa11□□□□□ -0.65
NUP50-216ENST00000486184 ERGP11308 486 aa11□□□□□ -0.65
NUP50-216ENST00000486184 KRT4P19013 534 aa11□□□□□ -0.65
NUP50-216ENST00000486184 TAC1P20366 129 aa11□□□□□ -0.65
NUP50-216ENST00000486184 CMPK1P30085 196 aa11□□□□□ -0.65
NUP50-216ENST00000486184 SEPHS1P49903 392 aa11□□□□□ -0.65
NUP50-216ENST00000486184 PPP1CAP62136 330 aa11□□□□□ -0.65
NUP50-216ENST00000486184 TBPL1P62380 186 aa11□□□□□ -0.65
NUP50-216ENST00000486184 CFHR1Q03591 330 aa11□□□□□ -0.65
NUP50-216ENST00000486184 TARDBPQ13148 414 aaKnown RBP eCLIP11□□□□□ -0.65
NUP50-216ENST00000486184 NAE1Q13564 534 aa11□□□□□ -0.65
NUP50-216ENST00000486184 FASTKQ14296 549 aaKnown RBP11□□□□□ -0.65
NUP50-216ENST00000486184 SLC5A12Q1EHB4 618 aa11□□□□□ -0.65
NUP50-216ENST00000486184 TECRLQ5HYJ1 363 aa11□□□□□ -0.65
NUP50-216ENST00000486184 CDKL4Q5MAI5 379 aa11□□□□□ -0.65
NUP50-216ENST00000486184 TMTC4Q5T4D3 741 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms