RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 ZNF185O15231 689 aa20.05■□□□□ 0.8
LMBR1-217ENST00000485985 NDUFS3O75489 264 aa20.05■□□□□ 0.8
LMBR1-217ENST00000485985 VAPBO95292 243 aa20.05■□□□□ 0.8
LMBR1-217ENST00000485985 VPS41P49754 854 aa20.05■□□□□ 0.8
LMBR1-217ENST00000485985 MRPL49Q13405 166 aaKnown RBP20.05■□□□□ 0.8
LMBR1-217ENST00000485985 TYSND1Q2T9J0 566 aa20.05■□□□□ 0.8
LMBR1-217ENST00000485985 SLC6A19Q695T7 634 aa20.05■□□□□ 0.8
LMBR1-217ENST00000485985 TTC27Q6P3X3 843 aa20.05■□□□□ 0.8
LMBR1-217ENST00000485985 MED25Q71SY5 747 aa20.05■□□□□ 0.8
LMBR1-217ENST00000485985 MRGPREQ86SM8 312 aa20.05■□□□□ 0.8
LMBR1-217ENST00000485985 OTUD6BQ8N6M0 293 aa20.05■□□□□ 0.8
LMBR1-217ENST00000485985 RBMXL3Q8N7X1 1067 aaKnown RBP20.05■□□□□ 0.8
LMBR1-217ENST00000485985 TMEM102Q8N9M5 508 aaPredicted RBP20.05■□□□□ 0.8
LMBR1-217ENST00000485985 PROKR1Q8TCW9 393 aa20.05■□□□□ 0.8
LMBR1-217ENST00000485985 LPGAT1Q92604 370 aa20.05■□□□□ 0.8
LMBR1-217ENST00000485985 PANX3Q96QZ0 392 aa20.05■□□□□ 0.8
LMBR1-217ENST00000485985 TRIM56Q9BRZ2 755 aaKnown RBP20.05■□□□□ 0.8
LMBR1-217ENST00000485985 EURLQ9NYK6 297 aa20.05■□□□□ 0.8
LMBR1-217ENST00000485985 SRPK3Q9UPE1 567 aa20.05■□□□□ 0.8
LMBR1-217ENST00000485985 PLCL2Q9UPR0 1127 aa20.05■□□□□ 0.8
LMBR1-217ENST00000485985 PADI2Q9Y2J8 665 aa20.05■□□□□ 0.8
LMBR1-217ENST00000485985 PPP2R2CQ9Y2T4 447 aa20.05■□□□□ 0.8
LMBR1-217ENST00000485985 CENPEQ02224 2701 aa20.05■□□□□ 0.8
LMBR1-217ENST00000485985 ITPR2Q14571 2701 aa20.05■□□□□ 0.8
LMBR1-217ENST00000485985 A1L4Q6 167 aa20.04■□□□□ 0.8
LMBR1-217ENST00000485985 A6NL46 340 aa20.04■□□□□ 0.8
LMBR1-217ENST00000485985 AP3B1O00203 1094 aa20.04■□□□□ 0.8
LMBR1-217ENST00000485985 AVILO75366 819 aa20.04■□□□□ 0.8
LMBR1-217ENST00000485985 DDAH2O95865 285 aa20.04■□□□□ 0.8
LMBR1-217ENST00000485985 S1PR4O95977 384 aa20.04■□□□□ 0.8
LMBR1-217ENST00000485985 ITGAXP20702 1163 aa20.04■□□□□ 0.8
LMBR1-217ENST00000485985 VARSP26640 1264 aaKnown RBP20.04■□□□□ 0.8
LMBR1-217ENST00000485985 PSMB5P28074 263 aa20.04■□□□□ 0.8
LMBR1-217ENST00000485985 OTX2P32243 289 aa20.04■□□□□ 0.8
LMBR1-217ENST00000485985 CDK16Q00536 496 aa20.04■□□□□ 0.8
LMBR1-217ENST00000485985 MLIPQ5VWP3 458 aa20.04■□□□□ 0.8
LMBR1-217ENST00000485985 ANKRD22Q5VYY1 191 aa20.04■□□□□ 0.8
LMBR1-217ENST00000485985 FCRL6Q6DN72 434 aa20.04■□□□□ 0.8
LMBR1-217ENST00000485985 TLDC1Q6P9B6 456 aa20.04■□□□□ 0.8
LMBR1-217ENST00000485985 LRRC6Q86X45 466 aa20.04■□□□□ 0.8
LMBR1-217ENST00000485985 RAB43Q86YS6 212 aa20.04■□□□□ 0.8
LMBR1-217ENST00000485985 PNPLA2Q96AD5 504 aa20.04■□□□□ 0.8
LMBR1-217ENST00000485985 SLC29A3Q9BZD2 475 aa20.04■□□□□ 0.8
LMBR1-217ENST00000485985 CREBBPQ92793 2442 aa20.04■□□□□ 0.8
LMBR1-217ENST00000485985 DOPEY1Q5JWR5 2465 aa20.03■□□□□ 0.8
LMBR1-217ENST00000485985 CACNA1DQ01668 2161 aa20.03■□□□□ 0.8
LMBR1-217ENST00000485985 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.03■□□□□ 0.8
LMBR1-217ENST00000485985 PRICKLE3O43900 615 aaPredicted RBP20.03■□□□□ 0.8
LMBR1-217ENST00000485985 NIPSNAP2O75323 286 aa20.03■□□□□ 0.8
LMBR1-217ENST00000485985 C1orf105O95561 183 aa20.03■□□□□ 0.8
LMBR1-217ENST00000485985 MAGEA6P43360 314 aa20.03■□□□□ 0.8
LMBR1-217ENST00000485985 RRADP55042 308 aa20.03■□□□□ 0.8
LMBR1-217ENST00000485985 DCDP81605 110 aaKnown RBP20.03■□□□□ 0.8
LMBR1-217ENST00000485985 GBX1Q14549 363 aa20.03■□□□□ 0.8
LMBR1-217ENST00000485985 OTOAQ7RTW8 1153 aa20.03■□□□□ 0.8
LMBR1-217ENST00000485985 PRR7Q8TB68 274 aa20.03■□□□□ 0.8
LMBR1-217ENST00000485985 DENND1AQ8TEH3 1009 aa20.03■□□□□ 0.8
LMBR1-217ENST00000485985 SKA2Q8WVK7 121 aaPredicted RBP20.03■□□□□ 0.8
LMBR1-217ENST00000485985 FAM136AQ96C01 138 aa20.03■□□□□ 0.8
LMBR1-217ENST00000485985 SMAD5Q99717 465 aaKnown RBP20.03■□□□□ 0.8
LMBR1-217ENST00000485985 SLC22A11Q9NSA0 550 aa20.03■□□□□ 0.8
LMBR1-217ENST00000485985 TXLNGQ9NUQ3 528 aa20.03■□□□□ 0.8
LMBR1-217ENST00000485985 IRAK4Q9NWZ3 460 aa20.03■□□□□ 0.8
LMBR1-217ENST00000485985 GPR83Q9NYM4 423 aa20.03■□□□□ 0.8
LMBR1-217ENST00000485985 IL1RAPL1Q9NZN1 696 aa20.03■□□□□ 0.8
LMBR1-217ENST00000485985 TSR3Q9UJK0 312 aaKnown RBP20.03■□□□□ 0.8
LMBR1-217ENST00000485985 PTRH2Q9Y3E5 179 aaKnown RBP20.03■□□□□ 0.8
LMBR1-217ENST00000485985 NRP2O60462 931 aa20.02■□□□□ 0.8
LMBR1-217ENST00000485985 GRIA3P42263 894 aa20.02■□□□□ 0.8
LMBR1-217ENST00000485985 GPS1Q13098 491 aa20.02■□□□□ 0.8
LMBR1-217ENST00000485985 NKAIN1Q4KMZ8 207 aa20.02■□□□□ 0.8
LMBR1-217ENST00000485985 KIAA0930Q6ICG6 404 aaPredicted RBP20.02■□□□□ 0.8
LMBR1-217ENST00000485985 MRPL14Q6P1L8 145 aaKnown RBP20.02■□□□□ 0.8
LMBR1-217ENST00000485985 CNSTQ6PJW8 725 aa20.02■□□□□ 0.8
LMBR1-217ENST00000485985 CAND1Q86VP6 1230 aaKnown RBP20.02■□□□□ 0.8
LMBR1-217ENST00000485985 MCATQ8IVS2 390 aaKnown RBP20.02■□□□□ 0.8
LMBR1-217ENST00000485985 SLC22A18Q96BI1 424 aa20.02■□□□□ 0.8
LMBR1-217ENST00000485985 MS4A14Q96JA4 679 aa20.02■□□□□ 0.8
LMBR1-217ENST00000485985 C17orf62Q9BQA9 187 aa20.02■□□□□ 0.8
LMBR1-217ENST00000485985 NDC1Q9BTX1 674 aa20.02■□□□□ 0.8
LMBR1-217ENST00000485985 RAB11FIP5Q9BXF6 653 aa20.02■□□□□ 0.8
LMBR1-217ENST00000485985 HOMER3Q9NSC5 361 aa20.02■□□□□ 0.8
LMBR1-217ENST00000485985 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.02■□□□□ 0.8
LMBR1-217ENST00000485985 MAP10Q9P2G4 905 aa20.02■□□□□ 0.8
LMBR1-217ENST00000485985 IFT80Q9P2H3 777 aaPredicted RBP20.02■□□□□ 0.8
LMBR1-217ENST00000485985 GPN3Q9UHW5 284 aaPredicted RBP20.02■□□□□ 0.8
LMBR1-217ENST00000485985 SLC39A10Q9ULF5 831 aa20.02■□□□□ 0.8
LMBR1-217ENST00000485985 KPNA5O15131 536 aa20.01■□□□□ 0.79
LMBR1-217ENST00000485985 UMODP07911 640 aa20.01■□□□□ 0.79
LMBR1-217ENST00000485985 F7P08709 466 aaPredicted RBP20.01■□□□□ 0.79
LMBR1-217ENST00000485985 MCM3P25205 808 aa20.01■□□□□ 0.79
LMBR1-217ENST00000485985 FMO4P31512 558 aa20.01■□□□□ 0.79
LMBR1-217ENST00000485985 FOLR3P41439 243 aa20.01■□□□□ 0.79
LMBR1-217ENST00000485985 RAPSNQ13702 412 aa20.01■□□□□ 0.79
LMBR1-217ENST00000485985 SF1Q15637 639 aaKnown RBP20.01■□□□□ 0.79
LMBR1-217ENST00000485985 MRNIPQ6NTE8 343 aa20.01■□□□□ 0.79
LMBR1-217ENST00000485985 FIGLAQ6QHK4 219 aa20.01■□□□□ 0.79
LMBR1-217ENST00000485985 RASGEF1CQ8N431 466 aa20.01■□□□□ 0.79
LMBR1-217ENST00000485985 OR2Y1Q8NGV0 311 aa20.01■□□□□ 0.79
LMBR1-217ENST00000485985 GSDMBQ8TAX9 411 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms