RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 CCDC88CQ9P219 2028 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 SNRNP200O75643 2136 aaKnown RBP11□□□□□ -0.65
SCFD1-206ENST00000484733 TCP11X1B4DZS4 312 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 AGPSO00116 658 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 SRPX2O60687 465 aaPredicted RBP11□□□□□ -0.65
SCFD1-206ENST00000484733 MMP11P24347 488 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 CCNFP41002 786 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 AIMP2Q13155 320 aaKnown RBP11□□□□□ -0.65
SCFD1-206ENST00000484733 SNX1Q13596 522 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 GRM7Q14831 915 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 RPS6KA1Q15418 735 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 PTRHD1Q6GMV3 140 aaKnown RBP11□□□□□ -0.65
SCFD1-206ENST00000484733 PRUNE1Q86TP1 453 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 IQCKQ8N0W5 287 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 KRT222Q8N1A0 295 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 MAIP1Q8WWC4 291 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 TM9SF4Q92544 642 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 IRAK4Q9NWZ3 460 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 SLC39A10Q9ULF5 831 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 B3GNT3Q9Y2A9 372 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 C1orf105O95561 183 aa10.99□□□□□ -0.65
SCFD1-206ENST00000484733 ATP5DP30049 168 aa10.99□□□□□ -0.65
SCFD1-206ENST00000484733 CDK16Q00536 496 aa10.99□□□□□ -0.65
SCFD1-206ENST00000484733 CYP2A13Q16696 494 aa10.99□□□□□ -0.65
SCFD1-206ENST00000484733 PRR30Q53SZ7 412 aaPredicted RBP10.99□□□□□ -0.65
SCFD1-206ENST00000484733 ZNF662Q6ZS27 426 aa10.99□□□□□ -0.65
SCFD1-206ENST00000484733 Q6ZS92 163 aa10.99□□□□□ -0.65
SCFD1-206ENST00000484733 COX15Q7KZN9 410 aa10.99□□□□□ -0.65
SCFD1-206ENST00000484733 FAM20CQ8IXL6 584 aa10.99□□□□□ -0.65
SCFD1-206ENST00000484733 RAB42Q8N4Z0 105 aa10.99□□□□□ -0.65
SCFD1-206ENST00000484733 TTC29Q8NA56 475 aaPredicted RBP10.99□□□□□ -0.65
SCFD1-206ENST00000484733 CFAP61Q8NHU2 1237 aa10.99□□□□□ -0.65
SCFD1-206ENST00000484733 IL17FQ96PD4 163 aa10.99□□□□□ -0.65
SCFD1-206ENST00000484733 BARD1Q99728 777 aaKnown RBP10.99□□□□□ -0.65
SCFD1-206ENST00000484733 KIFC1Q9BW19 673 aa10.99□□□□□ -0.65
SCFD1-206ENST00000484733 CUTCQ9NTM9 273 aa10.99□□□□□ -0.65
SCFD1-206ENST00000484733 BFARQ9NZS9 450 aa10.99□□□□□ -0.65
SCFD1-206ENST00000484733 SPATA7Q9P0W8 599 aa10.99□□□□□ -0.65
SCFD1-206ENST00000484733 NXT1Q9UKK6 140 aaKnown RBP10.99□□□□□ -0.65
SCFD1-206ENST00000484733 GUCA1BQ9UMX6 200 aa10.99□□□□□ -0.65
SCFD1-206ENST00000484733 KLHL20Q9Y2M5 609 aa10.99□□□□□ -0.65
SCFD1-206ENST00000484733 ANKRD12Q6UB98 2062 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 NDUFS3O75489 264 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 ZSCAN5DPP0CG00 497 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 ALAS2P22557 587 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 GRIA3P42263 894 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 GBX1Q14549 363 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 SLC9A5Q14940 896 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 NAA25Q14CX7 972 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 SF1Q15637 639 aaKnown RBP10.98□□□□□ -0.65
SCFD1-206ENST00000484733 NKG7Q16617 165 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 FAM214AQ32MH5 1076 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 IGFL2Q6UWQ7 119 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 TTLL10Q6ZVT0 673 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 LDB1Q86U70 411 aaPredicted RBP10.98□□□□□ -0.65
SCFD1-206ENST00000484733 ZADH2Q8N4Q0 377 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 MAGEC3Q8TD91 643 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 COG1Q8WTW3 980 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 SNRNP40Q96DI7 357 aaKnown RBP10.98□□□□□ -0.65
SCFD1-206ENST00000484733 SELENOSQ9BQE4 189 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 VSTM2BA6NLU5 285 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 H3BMM5 538 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 SOCS6O14544 535 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 SEMA7AO75326 666 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 CBX6O95503 412 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 TPSB2P20231 275 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 NMBRP28336 390 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 ADARP55265 1226 aaKnown RBP10.98□□□□□ -0.65
SCFD1-206ENST00000484733 SESN2P58004 480 aaPredicted RBP10.98□□□□□ -0.65
SCFD1-206ENST00000484733 RAPSNQ13702 412 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 TPSAB1Q15661 275 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 PRAMEF13Q5VWM6 474 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 LRRC8BQ6P9F7 803 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 C2orf73Q8N5S3 287 aaPredicted RBP10.98□□□□□ -0.65
SCFD1-206ENST00000484733 GSDMBQ8TAX9 411 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 VPS50Q96JG6 964 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 TCF12Q99081 682 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 SPSB2Q99619 263 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 SEMA3GQ9NS98 782 aa10.98□□□□□ -0.65
SCFD1-206ENST00000484733 PLEKHB1Q9UF11 243 aaPredicted RBP10.98□□□□□ -0.65
SCFD1-206ENST00000484733 WIPF3A6NGB9 483 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 EMP3P54852 163 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 TYSND1Q2T9J0 566 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 CTSL3PQ5NE16 218 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 RNF187Q5TA31 235 aaPredicted RBP10.97□□□□□ -0.65
SCFD1-206ENST00000484733 SDCCAG8Q86SQ7 713 aaPredicted RBP10.97□□□□□ -0.65
SCFD1-206ENST00000484733 FOPNLQ96NB1 174 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 BIRC8Q96P09 236 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 SLC6A20Q9NP91 592 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 LUZP4Q9P127 313 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 FAM169AQ9Y6X4 670 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 A0A1W2PPV9 198 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 GOLGA6L6A8MZA4 724 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 PFDN6O15212 129 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 MATN4O95460 622 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 ERGP11308 486 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 ARNTP27540 789 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 MRPL49Q13405 166 aaKnown RBP10.97□□□□□ -0.65
SCFD1-206ENST00000484733 C4orf17Q53FE4 359 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 MRNIPQ6NTE8 343 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms