RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 CEP112Q8N8E3 955 aa17.73■□□□□ 0.43
SMIM4-204ENST00000482728 NOA1Q8NC60 698 aaKnown RBP17.73■□□□□ 0.43
SMIM4-204ENST00000482728 HMGCLL1Q8TB92 370 aa17.73■□□□□ 0.43
SMIM4-204ENST00000482728 FAM45AQ8TCE6 357 aa17.73■□□□□ 0.43
SMIM4-204ENST00000482728 MCOLN3Q8TDD5 553 aa17.73■□□□□ 0.43
SMIM4-204ENST00000482728 EFHD1Q9BUP0 239 aa17.73■□□□□ 0.43
SMIM4-204ENST00000482728 TWSG1Q9GZX9 223 aa17.73■□□□□ 0.43
SMIM4-204ENST00000482728 GPN2Q9H9Y4 310 aaPredicted RBP17.73■□□□□ 0.43
SMIM4-204ENST00000482728 PADI1Q9ULC6 663 aa17.73■□□□□ 0.43
SMIM4-204ENST00000482728 PSAT1Q9Y617 370 aa17.73■□□□□ 0.43
SMIM4-204ENST00000482728 ITPR1Q14643 2758 aa17.73■□□□□ 0.43
SMIM4-204ENST00000482728 PCM1Q15154 2024 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 TEX51A0A1B0GUA7 166 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 KRT87PA6NCN2 255 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 K7ENP7 123 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 MYO1CO00159 1063 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 EFSO43281 561 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 FKBP9O95302 570 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 TIAF1O95411 115 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 MSL3P1P0C860 447 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 CYP2A7P20853 494 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 SRSF6Q13247 344 aaKnown RBP17.72■□□□□ 0.43
SMIM4-204ENST00000482728 TSTA3Q13630 321 aaPredicted RBP17.72■□□□□ 0.43
SMIM4-204ENST00000482728 ARHGAP19Q14CB8 494 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.72■□□□□ 0.43
SMIM4-204ENST00000482728 INO80CQ6PI98 192 aaPredicted RBP17.72■□□□□ 0.43
SMIM4-204ENST00000482728 CDHR3Q6ZTQ4 885 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 CEP128Q6ZU80 1094 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 CYS1Q717R9 158 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 ZC3HC1Q86WB0 502 aaKnown RBP17.72■□□□□ 0.43
SMIM4-204ENST00000482728 SPNS2Q8IVW8 549 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 FAM20CQ8IXL6 584 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 GPR135Q8IZ08 494 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 FBXO15Q8NCQ5 510 aaPredicted RBP17.72■□□□□ 0.43
SMIM4-204ENST00000482728 DENND1AQ8TEH3 1009 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 SMPDL3AQ92484 453 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 SEC14L1Q92503 715 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 LINGO1Q96FE5 620 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 PKP4Q99569 1192 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 SLC7A5P2Q9GIP4 190 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 CHRNA10Q9GZZ6 450 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 FAM60AQ9NP50 221 aa17.72■□□□□ 0.43
SMIM4-204ENST00000482728 MTRF1LQ9UGC7 380 aaKnown RBP17.72■□□□□ 0.43
SMIM4-204ENST00000482728 SNRNP200O75643 2136 aaKnown RBP17.72■□□□□ 0.43
SMIM4-204ENST00000482728 TCRBV9S1A1TA0A576 114 aa17.71■□□□□ 0.43
SMIM4-204ENST00000482728 C8GP07360 202 aa17.71■□□□□ 0.43
SMIM4-204ENST00000482728 MAGP20916 626 aa17.71■□□□□ 0.43
SMIM4-204ENST00000482728 FDXRP22570 491 aa17.71■□□□□ 0.43
SMIM4-204ENST00000482728 RPA3P35244 121 aaPredicted RBP17.71■□□□□ 0.43
SMIM4-204ENST00000482728 PNLIPRP1P54315 467 aa17.71■□□□□ 0.43
SMIM4-204ENST00000482728 ITGA1P56199 1179 aa17.71■□□□□ 0.43
SMIM4-204ENST00000482728 ZIC1Q15915 447 aa17.71■□□□□ 0.43
SMIM4-204ENST00000482728 CTAGE3PQ8IX95 158 aa17.71■□□□□ 0.43
SMIM4-204ENST00000482728 OR1L3Q8NH93 324 aa17.71■□□□□ 0.43
SMIM4-204ENST00000482728 IFT81Q8WYA0 676 aa17.71■□□□□ 0.43
SMIM4-204ENST00000482728 ZUFSPQ96AP4 578 aa17.71■□□□□ 0.43
SMIM4-204ENST00000482728 VPS39Q96JC1 886 aa17.71■□□□□ 0.43
SMIM4-204ENST00000482728 RHOJQ9H4E5 214 aa17.71■□□□□ 0.43
SMIM4-204ENST00000482728 IRAK4Q9NWZ3 460 aa17.71■□□□□ 0.43
SMIM4-204ENST00000482728 DMGDHQ9UI17 866 aaKnown RBP17.71■□□□□ 0.43
SMIM4-204ENST00000482728 KLHL20Q9Y2M5 609 aa17.71■□□□□ 0.43
SMIM4-204ENST00000482728 CFAP47Q6ZTR5 3102 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 ANKRD12Q6UB98 2062 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 LOC101059948A0A1B0GTJ6 334 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 FAM95CA0A1B0GW59 222 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 PABPN1LA6NDY0 278 aaKnown RBP17.7■□□□□ 0.42
SMIM4-204ENST00000482728 PRICKLE3O43900 615 aaPredicted RBP17.7■□□□□ 0.42
SMIM4-204ENST00000482728 CPNE3O75131 537 aaKnown RBP17.7■□□□□ 0.42
SMIM4-204ENST00000482728 PIAS1O75925 651 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 SLC16A8O95907 504 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 KLK3P07288 261 aaPredicted RBP17.7■□□□□ 0.42
SMIM4-204ENST00000482728 LIFP15018 202 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 STAT5AP42229 794 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 SLC12A2P55011 1212 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 FASTKQ14296 549 aaKnown RBP17.7■□□□□ 0.42
SMIM4-204ENST00000482728 FIGLAQ6QHK4 219 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 SYTL1Q8IYJ3 562 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 SNRNP27Q8WVK2 155 aaKnown RBP17.7■□□□□ 0.42
SMIM4-204ENST00000482728 CLIP3Q96DZ5 547 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 OLFM1Q99784 485 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 MIPEPQ99797 713 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 ACAT2Q9BWD1 397 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 TRIM54Q9BYV2 358 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 FAM129AQ9BZQ8 928 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 TSPYL1Q9H0U9 437 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 PARVBQ9HBI1 364 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 LRRC4CQ9HCJ2 640 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 SMYD2Q9NRG4 433 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 ZDHHC18Q9NUE0 388 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 PLCL2Q9UPR0 1127 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 PCDHB3Q9Y5E6 796 aa17.7■□□□□ 0.42
SMIM4-204ENST00000482728 CXorf49A8MYA2 514 aaPredicted RBP17.69■□□□□ 0.42
SMIM4-204ENST00000482728 E7EQ34 232 aa17.69■□□□□ 0.42
SMIM4-204ENST00000482728 SLC16A5O15375 505 aa17.69■□□□□ 0.42
SMIM4-204ENST00000482728 OR2B3O76000 313 aa17.69■□□□□ 0.42
SMIM4-204ENST00000482728 HIST1H2AGP0C0S8 130 aaPredicted RBP17.69■□□□□ 0.42
SMIM4-204ENST00000482728 HIST1H2ADP20671 130 aa17.69■□□□□ 0.42
SMIM4-204ENST00000482728 CMPK1P30085 196 aa17.69■□□□□ 0.42
SMIM4-204ENST00000482728 DLSTP36957 453 aa17.69■□□□□ 0.42
SMIM4-204ENST00000482728 GPX6P59796 221 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms