RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 RPS6KA6Q9UK32 745 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 LSM7Q9UK45 103 aaKnown RBP7.58□□□□□ -1.2
SNX13-208ENST00000482558 AGO1Q9UL18 857 aaKnown RBP7.58□□□□□ -1.2
SNX13-208ENST00000482558 CNOT6Q9ULM6 557 aaKnown RBP7.58□□□□□ -1.2
SNX13-208ENST00000482558 ZNF281Q9Y2X9 895 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 ZFP37Q9Y6Q3 630 aaPredicted RBP7.58□□□□□ -1.2
SNX13-208ENST00000482558 CEP350Q5VT06 3117 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 CHD5Q8TDI0 1954 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 TEX51A0A1B0GUA7 166 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 MYOCOSA0A1B0GUC4 107 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 A0A1W2PQ67 120 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 A8MT66 165 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 BBIP1A8MTZ0 92 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 E9PBE3 544 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 H3BMM5 538 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 H3BNC9 293 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 STX16-NPEPL1H3BU86 382 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 STX16O14662 325 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 UBDO15205 165 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 COCHO43405 550 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 PEX1O43933 1283 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 KLHL41O60662 606 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 KERAO60938 352 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 VPS26AO75436 327 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 NDUFS3O75489 264 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 STC2O76061 302 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 STAMBPO95630 424 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 GOT2P00505 430 aaKnown RBP7.57□□□□□ -1.2
SNX13-208ENST00000482558 URODP06132 367 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 ANPEPP15144 967 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 HMGA1P17096 107 aaKnown RBP7.57□□□□□ -1.2
SNX13-208ENST00000482558 ITGAXP20702 1163 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 CORO1AP31146 461 aaKnown RBP7.57□□□□□ -1.2
SNX13-208ENST00000482558 ARRB2P32121 409 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 ACVRL1P37023 503 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 WASP42768 502 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 PTGER3P43115 390 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 CPA2P48052 419 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 PSMD8P48556 350 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 KCNQ1P51787 676 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 ZNF140P52738 457 aaPredicted RBP7.57□□□□□ -1.2
SNX13-208ENST00000482558 MAXP61244 160 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 STX1BP61266 288 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 KLC1Q07866 573 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 TBL3Q12788 808 aaKnown RBP7.57□□□□□ -1.2
SNX13-208ENST00000482558 CUL3Q13618 768 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 NR0B2Q15466 257 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 ACCSLQ4AC99 568 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 PITRM1Q5JRX3 1037 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 ARMC4Q5T2S8 1044 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 HLA-DQA1Q5Y7H0 255 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 METTL2BQ6P1Q9 378 aaKnown RBP7.57□□□□□ -1.2
SNX13-208ENST00000482558 PRMT9Q6P2P2 845 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 UNC5DQ6UXZ4 953 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 GLT6D1Q7Z4J2 308 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 DNAJB7Q7Z6W7 309 aaPredicted RBP7.57□□□□□ -1.2
SNX13-208ENST00000482558 ISCA2Q86U28 154 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 CUZD1Q86UP6 607 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 MFSD6LQ8IWD5 586 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 DEFB107AQ8IZN7 70 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 LSMEM2Q8N112 164 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.57□□□□□ -1.2
SNX13-208ENST00000482558 TTC9BQ8N6N2 239 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 TXNDC5Q8NBS9 432 aaKnown RBP7.57□□□□□ -1.2
SNX13-208ENST00000482558 ACVR1CQ8NER5 493 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 CREB3L4Q8TEY5 395 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 TSPEARQ8WU66 669 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 WDR60Q8WVS4 1066 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 NRG4Q8WWG1 115 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 RMDN1Q96DB5 314 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 ZNF333Q96JL9 665 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 LENG8Q96PV6 779 aaPredicted RBP7.57□□□□□ -1.2
SNX13-208ENST00000482558 PANX3Q96QZ0 392 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 ZNF184Q99676 751 aaPredicted RBP7.57□□□□□ -1.2
SNX13-208ENST00000482558 KCNJ15Q99712 375 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 SLC25A23Q9BV35 468 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 C1QTNF3Q9BXJ4 246 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 NUSAP1Q9BXS6 441 aaKnown RBP7.57□□□□□ -1.2
SNX13-208ENST00000482558 TDRD1Q9BXT4 1180 aaKnown RBP7.57□□□□□ -1.2
SNX13-208ENST00000482558 S100A14Q9HCY8 104 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 CCDC177Q9NQR7 707 aaPredicted RBP7.57□□□□□ -1.2
SNX13-208ENST00000482558 GTSE1Q9NYZ3 720 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 C6orf203Q9P0P8 240 aaPredicted RBP7.57□□□□□ -1.2
SNX13-208ENST00000482558 TNFRSF10DQ9UBN6 386 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 MAN2B2Q9Y2E5 1009 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 PCDHB1Q9Y5F3 818 aa7.57□□□□□ -1.2
SNX13-208ENST00000482558 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.57□□□□□ -1.2
SNX13-208ENST00000482558 TANC1Q9C0D5 1861 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 CCDC78A2IDD5 438 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 CCDC162PA2VCL2 907 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 FITM1A5D6W6 292 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 ANKRD66B4E2M5 251 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 H0Y3Z8 333 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 H0Y626 953 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 RFXAPO00287 272 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 AP3D1O14617 1153 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 STX7O15400 261 aaKnown RBP7.56□□□□□ -1.2
SNX13-208ENST00000482558 ZBTB14O43829 449 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 TBX10O75333 385 aa7.56□□□□□ -1.2
SNX13-208ENST00000482558 KRT36O76013 467 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms