RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 NACC2Q96BF6 587 aa12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 MFSD3Q96ES6 412 aa12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 IL17FQ96PD4 163 aa12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 SMAD5Q99717 465 aaKnown RBP12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 TRIM56Q9BRZ2 755 aaKnown RBP12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 MRM3Q9HC36 420 aaKnown RBP12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 KLHL20Q9Y2M5 609 aa12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 MAP4K5Q9Y4K4 846 aa12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 MED13Q9UHV7 2174 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 CCDC88CQ9P219 2028 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 CLEC18AA5D8T8 446 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 H3BMM5 538 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 NRDCO43847 1150 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 SRPX2O60687 465 aaPredicted RBP12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 VAPBO95292 243 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 C1orf105O95561 183 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 FMO4P31512 558 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 GRIA3P42263 894 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 TERF1P54274 439 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 SRSF1Q07955 248 aaKnown RBP eCLIP12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 GRM7Q14831 915 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 SLC9A5Q14940 896 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 FAM214AQ32MH5 1076 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 DCAF10Q5QP82 559 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 RNF187Q5TA31 235 aaPredicted RBP12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 FCRL6Q6DN72 434 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 TTC27Q6P3X3 843 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 CLEC18BQ6UXF7 455 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 MRGPREQ86SM8 312 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 TAX1BP1Q86VP1 789 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 LRRC8AQ8IWT6 810 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 GALNT16Q8N428 558 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 PRELID2Q8N945 189 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 TTC29Q8NA56 475 aaPredicted RBP12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 CLEC18CQ8NCF0 446 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 PNPLA2Q96AD5 504 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 TCF12Q99081 682 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 MFRPQ9BY79 579 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 SYBUQ9NX95 663 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 P4HTMQ9NXG6 502 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 IL1RAPL1Q9NZN1 696 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 SOX13Q9UN79 622 aa12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 RUVBL2Q9Y230 463 aaKnown RBP12.91□□□□□ -0.34
CTDSP1-208ENST00000482272 A0A1B0GX78 115 aa12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 GOLGA8KD6RF30 607 aa12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 GOLGA8TH3BQL2 631 aa12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 PRICKLE3O43900 615 aaPredicted RBP12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 CNOT3O75175 753 aaKnown RBP12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 IPO13O94829 963 aaKnown RBP12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 SORBS2O94875 1100 aaKnown RBP12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 ALBP02768 609 aa12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 ESR1P03372 595 aa12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 ALPPP05187 535 aa12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 PAMP19021 973 aa12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 CHRM3P20309 590 aa12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 RAPSNQ13702 412 aa12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 TRIP13Q15645 432 aaPredicted RBP12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 INPP5JQ15735 1006 aaPredicted RBP12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 CYP2A13Q16696 494 aa12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 CCSMST1Q4G0I0 132 aa12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 CTSL3PQ5NE16 218 aa12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 FHL5Q5TD97 284 aa12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 VWA5B1Q5TIE3 1220 aa12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 ANKRD22Q5VYY1 191 aa12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 ARMC3Q5W041 872 aa12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 OVCH1Q7RTY7 1134 aa12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 HMGCLL1Q8TB92 370 aa12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 SELENOSQ9BQE4 189 aa12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 ATP13A2Q9NQ11 1180 aa12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 CUTCQ9NTM9 273 aa12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 VPS9D1Q9Y2B5 631 aa12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 NFS1Q9Y697 457 aa12.9□□□□□ -0.34
CTDSP1-208ENST00000482272 MAGEB16A2A368 324 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 AGPSO00116 658 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 MASP2O00187 686 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 DSCR3O14972 297 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 NRP2O60462 931 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 AVILO75366 819 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 ONECUT2O95948 504 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 ITGAXP20702 1163 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 OGNP20774 298 aaKnown RBP12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 GNLYP22749 145 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 GCGRP47871 477 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 ADARP55265 1226 aaKnown RBP12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 SOX8P57073 446 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 MYBPC3Q14896 1274 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 NAA25Q14CX7 972 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 ANKRD20A4Q4UJ75 823 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 CNSTQ6PJW8 725 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 RBMXL3Q8N7X1 1067 aaKnown RBP12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 TM9SF4Q92544 642 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 FKBP10Q96AY3 582 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 VPS50Q96JG6 964 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 BIRC8Q96P09 236 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 WDR54Q9H977 334 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 LRRC4CQ9HCJ2 640 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 SPATA7Q9P0W8 599 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 MAP10Q9P2G4 905 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 GALPQ9UBC7 116 aa12.89□□□□□ -0.35
CTDSP1-208ENST00000482272 CRYL1Q9Y2S2 319 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms