RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 SPAG5Q96R06 1193 aa5.18□□□□□ -1.58
SF3B1-210ENST00000482158 SIX2Q9NPC8 291 aa5.18□□□□□ -1.58
SF3B1-210ENST00000482158 WWOXQ9NZC7 414 aa5.18□□□□□ -1.58
SF3B1-210ENST00000482158 ZNF624Q9P2J8 865 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-210ENST00000482158 A0A087WYN8 130 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 TRAV34A0A0B4J273 112 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 ENO4A6NNW6 628 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 SMIM1B2RUZ4 78 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 FAM86B1E9PN63 330 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 IKBKBO14920 756 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 GSRP00390 522 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 NGFP01138 241 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 ZFYP08048 801 aaPredicted RBP5.17□□□□□ -1.58
SF3B1-210ENST00000482158 FAM86B2P0C5J1 330 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 PLA2G4BP0C869 781 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 IGHV4-31P0DP07 118 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 NAGLUP54802 743 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 GSDMDP57764 484 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 DLK1P80370 383 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 KRTAP24-1Q3LI83 254 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 SFMBT2Q5VUG0 894 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 TRMT1LQ7Z2T5 733 aaKnown RBP5.17□□□□□ -1.58
SF3B1-210ENST00000482158 SPATA19Q7Z5L4 167 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 CUZD1Q86UP6 607 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 EID3Q8N140 333 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 OR52N5Q8NH56 324 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 GOT1L1Q8NHS2 421 aaPredicted RBP5.17□□□□□ -1.58
SF3B1-210ENST00000482158 SETD6Q8TBK2 473 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 DEPDC1BQ8WUY9 529 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 SPATA17Q96L03 361 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 GBP5Q96PP8 586 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 UHRF2Q96PU4 802 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 INTS14Q96SY0 518 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 CCDC3Q9BQI4 270 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 SHARPINQ9H0F6 387 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 FN3KQ9H479 309 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 FGF21Q9NSA1 209 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 ECHDC1Q9NTX5 307 aa5.17□□□□□ -1.58
SF3B1-210ENST00000482158 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.17□□□□□ -1.58
SF3B1-210ENST00000482158 ANKRD61A6NGH8 418 aa5.16□□□□□ -1.58
SF3B1-210ENST00000482158 NADKO95544 446 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-210ENST00000482158 FAM58BPP0C7Q3 252 aa5.16□□□□□ -1.58
SF3B1-210ENST00000482158 ACAT1P24752 427 aaKnown RBP5.16□□□□□ -1.58
SF3B1-210ENST00000482158 PSMA3P25788 255 aa5.16□□□□□ -1.58
SF3B1-210ENST00000482158 CEACAM8P31997 349 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-210ENST00000482158 CAPZA1P52907 286 aa5.16□□□□□ -1.58
SF3B1-210ENST00000482158 BFSP1Q12934 665 aa5.16□□□□□ -1.58
SF3B1-210ENST00000482158 TUBB2AQ13885 445 aa5.16□□□□□ -1.58
SF3B1-210ENST00000482158 LACTB2Q53H82 288 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-210ENST00000482158 SUSD4Q5VX71 490 aa5.16□□□□□ -1.58
SF3B1-210ENST00000482158 SHQ1Q6PI26 577 aaKnown RBP5.16□□□□□ -1.58
SF3B1-210ENST00000482158 OR8H3Q8N146 312 aa5.16□□□□□ -1.58
SF3B1-210ENST00000482158 OR4K1Q8NGD4 311 aa5.16□□□□□ -1.58
SF3B1-210ENST00000482158 NSMAFQ92636 917 aa5.16□□□□□ -1.58
SF3B1-210ENST00000482158 PROX1Q92786 737 aa5.16□□□□□ -1.58
SF3B1-210ENST00000482158 TUBB2BQ9BVA1 445 aa5.16□□□□□ -1.58
SF3B1-210ENST00000482158 KRTAP1-5Q9BYS1 174 aa5.16□□□□□ -1.58
SF3B1-210ENST00000482158 TLE6Q9H808 572 aa5.16□□□□□ -1.58
SF3B1-210ENST00000482158 IGHV4-61A0A0C4DH41 118 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 HTR3EA5X5Y0 456 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 IGHV4-59P01825 116 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 PRSS1P07477 247 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 CD48P09326 243 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 IRF2P14316 349 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 HOXB6P17509 224 aaKnown RBP5.15□□□□□ -1.59
SF3B1-210ENST00000482158 TCEA1P23193 301 aaKnown RBP5.15□□□□□ -1.59
SF3B1-210ENST00000482158 NKX2-1P43699 371 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-210ENST00000482158 BMXP51813 675 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 MAZP56270 477 aaKnown RBP5.15□□□□□ -1.59
SF3B1-210ENST00000482158 PTENP60484 403 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 GCNT1Q02742 428 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 GPR17Q13304 367 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 HERC3Q15034 1050 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 KIAA1644Q3SXP7 199 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 FAM91A1Q658Y4 838 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 CEACAM20Q6UY09 585 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 C11orf57Q6ZUT1 292 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-210ENST00000482158 PIGZQ86VD9 579 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 CDK20Q8IZL9 346 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 LGI2Q8N0V4 545 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 RASGEF1AQ8N9B8 481 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 OR10V1Q8NGI7 309 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 OR10Q1Q8NGQ4 319 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 C9orf43Q8TAL5 461 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-210ENST00000482158 CORO2AQ92828 525 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 MR1Q95460 341 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 FAM162AQ96A26 154 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 EPYCQ99645 322 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 THUMPD3Q9BV44 507 aaKnown RBP5.15□□□□□ -1.59
SF3B1-210ENST00000482158 OR2B2Q9GZK3 357 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 MIS12Q9H081 205 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 TRPV4Q9HBA0 871 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 XAB2Q9HCS7 855 aaKnown RBP5.15□□□□□ -1.59
SF3B1-210ENST00000482158 DNAJB9Q9UBS3 223 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 STUB1Q9UNE7 303 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 SNX7Q9UNH6 387 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 POMT1Q9Y6A1 747 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 ARID2Q68CP9 1835 aa5.15□□□□□ -1.59
SF3B1-210ENST00000482158 TRAV24A0A0B4J272 114 aa5.14□□□□□ -1.59
SF3B1-210ENST00000482158 ARHGEF37A1IGU5 675 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms