RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 ILF2Q12905 390 aaKnown RBP5.04□□□□□ -1.6
COPA-203ENST00000481040 FOXF2Q12947 444 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 GPR18Q14330 331 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 CEBPEQ15744 281 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 EPC2Q52LR7 807 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 FASTKD1Q53R41 847 aaKnown RBP5.04□□□□□ -1.6
COPA-203ENST00000481040 CEP78Q5JTW2 689 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 CCNYL2Q5T2Q4 361 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 SUSD4Q5VX71 490 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 IGFL4Q6B9Z1 124 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 RAET1GQ6H3X3 334 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 TYW3Q6IPR3 259 aaKnown RBP5.04□□□□□ -1.6
COPA-203ENST00000481040 FAM166AQ6J272 317 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 C11orf63Q6NUN7 778 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 CTU1Q7Z7A3 348 aaKnown RBP5.04□□□□□ -1.6
COPA-203ENST00000481040 TMEM110Q86TL2 294 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 SYVN1Q86TM6 617 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 ASPGQ86U10 573 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 TMEM126BQ8IUX1 230 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 DNAJC10Q8IXB1 793 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 ZNF34Q8IZ26 560 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 SAMD14Q8IZD0 417 aaPredicted RBP5.04□□□□□ -1.6
COPA-203ENST00000481040 TMEM185AQ8NFB2 350 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 OR14A16Q8NHC5 309 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 LARP4BQ92615 738 aaKnown RBP5.04□□□□□ -1.6
COPA-203ENST00000481040 FAM84BQ96KN1 310 aaPredicted RBP5.04□□□□□ -1.6
COPA-203ENST00000481040 SORCS2Q96PQ0 1159 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 TXN2Q99757 166 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 C17orf62Q9BQA9 187 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 TSPYL1Q9H0U9 437 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 NAPBQ9H115 298 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 CUEDC2Q9H467 287 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 RPF1Q9H9Y2 349 aaKnown RBP5.04□□□□□ -1.6
COPA-203ENST00000481040 KCNMB3Q9NPA1 279 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 FZD3Q9NPG1 666 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 NOX4Q9NPH5 578 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 IL36RNQ9UBH0 155 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 LRWD1Q9UFC0 647 aa5.04□□□□□ -1.6
COPA-203ENST00000481040 FOXA2Q9Y261 457 aaPredicted RBP5.04□□□□□ -1.6
COPA-203ENST00000481040 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.04□□□□□ -1.6
COPA-203ENST00000481040 hDV102S1A0JD36 115 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 PRSS46E5RG02 174 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 TMEM178BH3BS89 294 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 RPS6KA5O75582 802 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 BCAR3O75815 825 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 WISP2O76076 250 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 BMP10O95393 424 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 LATS1O95835 1130 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 FGF2P09038 288 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 HSPA5P11021 654 aaKnown RBP5.03□□□□□ -1.6
COPA-203ENST00000481040 DNAJB1P25685 340 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 ACVRL1P37023 503 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 RPL21P46778 160 aaKnown RBP5.03□□□□□ -1.6
COPA-203ENST00000481040 HNMTP50135 292 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 HNRNPFP52597 415 aaKnown RBP5.03□□□□□ -1.6
COPA-203ENST00000481040 TRA2BP62995 288 aaKnown RBP5.03□□□□□ -1.6
COPA-203ENST00000481040 PDE1BQ01064 536 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 TRAF1Q13077 416 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 PRKAA1Q13131 559 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 MTX1Q13505 466 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 HNF4GQ14541 408 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 KLC3Q6P597 504 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 PLXDC2Q6UX71 529 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 TAF8Q7Z7C8 310 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 C1orf87Q8N0U7 546 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 RASGEF1AQ8N9B8 481 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 L3MBTL4Q8NA19 623 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 MAGEC3Q8TD91 643 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 FIG4Q92562 907 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 C14orf79Q96F83 325 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 RASL10BQ96S79 203 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 DDX50Q9BQ39 737 aaKnown RBP5.03□□□□□ -1.6
COPA-203ENST00000481040 IDI2Q9BXS1 227 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 PRRG4Q9BZD6 226 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 RAB17Q9H0T7 212 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 TMEM245Q9H330 911 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 COQ10BQ9H8M1 238 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 KRCC1Q9NPI7 259 aaPredicted RBP5.03□□□□□ -1.6
COPA-203ENST00000481040 PPANQ9NQ55 473 aaKnown RBP5.03□□□□□ -1.6
COPA-203ENST00000481040 GSN-AS1Q9NRJ2 163 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 FAM212BQ9NTI7 297 aaPredicted RBP5.03□□□□□ -1.6
COPA-203ENST00000481040 ZCCHC3Q9NUD5 404 aaKnown RBP5.03□□□□□ -1.6
COPA-203ENST00000481040 TMOD2Q9NZR1 351 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 ANKMY1Q9P2S6 941 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 EXTL2Q9UBQ6 330 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 WDR83OSQ9Y284 106 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 JRKLQ9Y4A0 524 aa5.03□□□□□ -1.6
COPA-203ENST00000481040 UBE4BO95155 1302 aa5.02□□□□□ -1.61
COPA-203ENST00000481040 PCDH11YQ9BZA8 1340 aa5.02□□□□□ -1.61
COPA-203ENST00000481040 A0A087X0K7 114 aa5.02□□□□□ -1.61
COPA-203ENST00000481040 A0A0B4J203 849 aa5.02□□□□□ -1.61
COPA-203ENST00000481040 IGHV4-28A0A0C4DH34 117 aa5.02□□□□□ -1.61
COPA-203ENST00000481040 SMIM35A0A1B0GVV1 85 aa5.02□□□□□ -1.61
COPA-203ENST00000481040 MED19A0JLT2 244 aaPredicted RBP5.02□□□□□ -1.61
COPA-203ENST00000481040 CASTOR2A6NHX0 329 aa5.02□□□□□ -1.61
COPA-203ENST00000481040 MCF2LO15068 1137 aa5.02□□□□□ -1.61
COPA-203ENST00000481040 MAGEB2O15479 319 aa5.02□□□□□ -1.61
COPA-203ENST00000481040 PROP1O75360 226 aa5.02□□□□□ -1.61
COPA-203ENST00000481040 APBB3O95704 486 aa5.02□□□□□ -1.61
COPA-203ENST00000481040 CH25HO95992 272 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms