RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 ATP13A3Q9H7F0 1226 aa4.53□□□□□ -1.68
CALD1-219ENST00000480638 PIH1D3Q9NQM4 214 aaKnown RBP4.53□□□□□ -1.68
CALD1-219ENST00000480638 ANKEF1Q9NU02 776 aa4.53□□□□□ -1.68
CALD1-219ENST00000480638 RNF150Q9ULK6 438 aa4.53□□□□□ -1.68
CALD1-219ENST00000480638 TMED3Q9Y3Q3 217 aa4.53□□□□□ -1.68
CALD1-219ENST00000480638 EDDM13A0A1B0GTR0 161 aa4.52□□□□□ -1.69
CALD1-219ENST00000480638 C2orf81A6NN90 581 aa4.52□□□□□ -1.69
CALD1-219ENST00000480638 PTGESO14684 152 aa4.52□□□□□ -1.69
CALD1-219ENST00000480638 SPRY1O43609 319 aaPredicted RBP4.52□□□□□ -1.69
CALD1-219ENST00000480638 TYMPP19971 482 aa4.52□□□□□ -1.69
CALD1-219ENST00000480638 MC5RP33032 325 aa4.52□□□□□ -1.69
CALD1-219ENST00000480638 PTGER4P35408 488 aa4.52□□□□□ -1.69
CALD1-219ENST00000480638 CAPZA2P47755 286 aa4.52□□□□□ -1.69
CALD1-219ENST00000480638 SLC6A12P48065 614 aa4.52□□□□□ -1.69
CALD1-219ENST00000480638 RGS19P49795 217 aa4.52□□□□□ -1.69
CALD1-219ENST00000480638 LUMP51884 338 aaPredicted RBP4.52□□□□□ -1.69
CALD1-219ENST00000480638 CALD1Q05682 793 aaKnown RBP4.52□□□□□ -1.69
CALD1-219ENST00000480638 HERC3Q15034 1050 aa4.52□□□□□ -1.69
CALD1-219ENST00000480638 PDLIM3Q53GG5 364 aaPredicted RBP4.52□□□□□ -1.69
CALD1-219ENST00000480638 CENPVQ7Z7K6 275 aaPredicted RBP4.52□□□□□ -1.69
CALD1-219ENST00000480638 LACC1Q8IV20 430 aa4.52□□□□□ -1.69
CALD1-219ENST00000480638 MMD2Q8IY49 270 aa4.52□□□□□ -1.69
CALD1-219ENST00000480638 LSMEM2Q8N112 164 aa4.52□□□□□ -1.69
CALD1-219ENST00000480638 RAB42Q8N4Z0 105 aa4.52□□□□□ -1.69
CALD1-219ENST00000480638 DCLK2Q8N568 766 aa4.52□□□□□ -1.69
CALD1-219ENST00000480638 MOB3AQ96BX8 217 aa4.52□□□□□ -1.69
CALD1-219ENST00000480638 MAGED4Q96JG8 741 aa4.52□□□□□ -1.69
CALD1-219ENST00000480638 ZNF599Q96NL3 588 aa4.52□□□□□ -1.69
CALD1-219ENST00000480638 ZDHHC18Q9NUE0 388 aa4.52□□□□□ -1.69
CALD1-219ENST00000480638 EPHA6Q9UF33 1036 aa4.52□□□□□ -1.69
CALD1-219ENST00000480638 TNNQ9UQP3 1299 aa4.52□□□□□ -1.69
CALD1-219ENST00000480638 RPS6KL1Q9Y6S9 549 aa4.52□□□□□ -1.69
CALD1-219ENST00000480638 DDHD2O94830 711 aa4.51□□□□□ -1.69
CALD1-219ENST00000480638 BDNFP23560 247 aa4.51□□□□□ -1.69
CALD1-219ENST00000480638 PCGF2P35227 344 aa4.51□□□□□ -1.69
CALD1-219ENST00000480638 CSE1LP55060 971 aaKnown RBP4.51□□□□□ -1.69
CALD1-219ENST00000480638 GCNT1Q02742 428 aa4.51□□□□□ -1.69
CALD1-219ENST00000480638 ITGA7Q13683 1181 aa4.51□□□□□ -1.69
CALD1-219ENST00000480638 PTPRCAPQ14761 206 aa4.51□□□□□ -1.69
CALD1-219ENST00000480638 TMEM266Q2M3C6 531 aa4.51□□□□□ -1.69
CALD1-219ENST00000480638 CRY2Q49AN0 593 aa4.51□□□□□ -1.69
CALD1-219ENST00000480638 XKR6Q5GH73 641 aa4.51□□□□□ -1.69
CALD1-219ENST00000480638 IQCHQ86VS3 1027 aa4.51□□□□□ -1.69
CALD1-219ENST00000480638 NIPA2Q8N8Q9 360 aa4.51□□□□□ -1.69
CALD1-219ENST00000480638 KCTD6Q8NC69 237 aa4.51□□□□□ -1.69
CALD1-219ENST00000480638 ZNF485Q8NCK3 441 aa4.51□□□□□ -1.69
CALD1-219ENST00000480638 DBF4BQ8NFT6 615 aa4.51□□□□□ -1.69
CALD1-219ENST00000480638 OR13C3Q8NGS6 347 aa4.51□□□□□ -1.69
CALD1-219ENST00000480638 PIGBQ92521 554 aa4.51□□□□□ -1.69
CALD1-219ENST00000480638 SECISBP2LQ93073 1101 aaKnown RBP4.51□□□□□ -1.69
CALD1-219ENST00000480638 THOC1Q96FV9 657 aaKnown RBP4.51□□□□□ -1.69
CALD1-219ENST00000480638 POM121L2Q96KW2 1035 aa4.51□□□□□ -1.69
CALD1-219ENST00000480638 LINC00479Q96M42 142 aa4.51□□□□□ -1.69
CALD1-219ENST00000480638 FUCA2Q9BTY2 467 aa4.51□□□□□ -1.69
CALD1-219ENST00000480638 CENPOQ9BU64 300 aa4.51□□□□□ -1.69
CALD1-219ENST00000480638 EGLN1Q9GZT9 426 aa4.51□□□□□ -1.69
CALD1-219ENST00000480638 CPSF3Q9UKF6 684 aaKnown RBP4.51□□□□□ -1.69
CALD1-219ENST00000480638 EXOGQ9Y2C4 368 aaKnown RBP4.51□□□□□ -1.69
CALD1-219ENST00000480638 WDR37Q9Y2I8 494 aa4.51□□□□□ -1.69
CALD1-219ENST00000480638 ARPC2O15144 300 aa4.5□□□□□ -1.69
CALD1-219ENST00000480638 P4HA2O15460 535 aa4.5□□□□□ -1.69
CALD1-219ENST00000480638 TADA2AO75478 443 aa4.5□□□□□ -1.69
CALD1-219ENST00000480638 DARSP14868 501 aaKnown RBP4.5□□□□□ -1.69
CALD1-219ENST00000480638 CYP11B2P19099 503 aa4.5□□□□□ -1.69
CALD1-219ENST00000480638 CSTF2P33240 577 aaKnown RBP eCLIP4.5□□□□□ -1.699e-7■■■■□ 19.9
CALD1-219ENST00000480638 LHX1P48742 406 aa4.5□□□□□ -1.69
CALD1-219ENST00000480638 RALGDSQ12967 914 aa4.5□□□□□ -1.69
CALD1-219ENST00000480638 CUL3Q13618 768 aa4.5□□□□□ -1.69
CALD1-219ENST00000480638 MCMDC2Q4G0Z9 681 aa4.5□□□□□ -1.69
CALD1-219ENST00000480638 SLC35D3Q5M8T2 416 aa4.5□□□□□ -1.69
CALD1-219ENST00000480638 MFSD4BQ5TF39 518 aa4.5□□□□□ -1.69
CALD1-219ENST00000480638 TTC30BQ8N4P2 665 aa4.5□□□□□ -1.69
CALD1-219ENST00000480638 ZNF614Q8N883 585 aa4.5□□□□□ -1.69
CALD1-219ENST00000480638 BMPERQ8N8U9 685 aa4.5□□□□□ -1.69
CALD1-219ENST00000480638 XXYLT1Q8NBI6 393 aa4.5□□□□□ -1.69
CALD1-219ENST00000480638 PGAP3Q96FM1 320 aaPredicted RBP4.5□□□□□ -1.69
CALD1-219ENST00000480638 MUS81Q96NY9 551 aa4.5□□□□□ -1.69
CALD1-219ENST00000480638 Q9H8V8 135 aa4.5□□□□□ -1.69
CALD1-219ENST00000480638 TRPV4Q9HBA0 871 aa4.5□□□□□ -1.69
CALD1-219ENST00000480638 NDUFAF8A1L188 74 aa4.49□□□□□ -1.69
CALD1-219ENST00000480638 GLRA3O75311 464 aa4.49□□□□□ -1.69
CALD1-219ENST00000480638 SLCO2B1O94956 709 aa4.49□□□□□ -1.69
CALD1-219ENST00000480638 C22orf31O95567 290 aa4.49□□□□□ -1.69
CALD1-219ENST00000480638 ATP5BP06576 529 aaKnown RBP4.49□□□□□ -1.69
CALD1-219ENST00000480638 CD22P20273 847 aa4.49□□□□□ -1.69
CALD1-219ENST00000480638 CPT2P23786 658 aa4.49□□□□□ -1.69
CALD1-219ENST00000480638 CCR10P46092 362 aa4.49□□□□□ -1.69
CALD1-219ENST00000480638 ASCL1P50553 236 aa4.49□□□□□ -1.69
CALD1-219ENST00000480638 PRPF4BQ13523 1007 aaKnown RBP4.49□□□□□ -1.69
CALD1-219ENST00000480638 TNIP1Q15025 636 aa4.49□□□□□ -1.69
CALD1-219ENST00000480638 SGSM1Q2NKQ1 1148 aa4.49□□□□□ -1.69
CALD1-219ENST00000480638 CTU2Q2VPK5 515 aaKnown RBP4.49□□□□□ -1.69
CALD1-219ENST00000480638 ARMC4Q5T2S8 1044 aa4.49□□□□□ -1.69
CALD1-219ENST00000480638 TMEM207Q6UWW9 146 aa4.49□□□□□ -1.69
CALD1-219ENST00000480638 RBPMS2Q6ZRY4 209 aaKnown RBP4.49□□□□□ -1.69
CALD1-219ENST00000480638 ZBTB49Q6ZSB9 765 aa4.49□□□□□ -1.69
CALD1-219ENST00000480638 DET1Q7L5Y6 550 aa4.49□□□□□ -1.69
CALD1-219ENST00000480638 MAML2Q8IZL2 1156 aaPredicted RBP4.49□□□□□ -1.69
CALD1-219ENST00000480638 MAPK1IP1LQ8NDC0 245 aa4.49□□□□□ -1.69
CALD1-219ENST00000480638 CPNE1Q99829 537 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms