RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 CDH3P22223 829 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 OAS2P29728 719 aaKnown RBP19.06■□□□□ 0.64
LIME1-205ENST00000480139 TSPAN7P41732 249 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 GABREP78334 506 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 TAP2Q03519 686 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 CSHL1Q14406 222 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 TSNQ15631 228 aaKnown RBP19.06■□□□□ 0.64
LIME1-205ENST00000480139 C3orf38Q5JPI3 329 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 FBXO38Q6PIJ6 1188 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 LRRC56Q8IYG6 542 aaPredicted RBP19.06■□□□□ 0.64
LIME1-205ENST00000480139 CENPLQ8N0S6 344 aaPredicted RBP19.06■□□□□ 0.64
LIME1-205ENST00000480139 GATA6Q92908 595 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 KIAA1191Q96A73 305 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 PRR11Q96HE9 360 aaPredicted RBP19.06■□□□□ 0.64
LIME1-205ENST00000480139 B3GNT4Q9C0J1 378 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 CHRNA10Q9GZZ6 450 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 IGSF5Q9NSI5 407 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 SIDT1Q9NXL6 827 aaKnown RBP19.06■□□□□ 0.64
LIME1-205ENST00000480139 ARL15Q9NXU5 204 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 STOX2Q9P2F5 926 aaPredicted RBP19.06■□□□□ 0.64
LIME1-205ENST00000480139 AKAP13Q12802 2813 aa19.05■□□□□ 0.64
LIME1-205ENST00000480139 JMJD7P0C870 316 aa19.05■□□□□ 0.64
LIME1-205ENST00000480139 HSD11B2P80365 405 aa19.05■□□□□ 0.64
LIME1-205ENST00000480139 DLG1Q12959 904 aa19.05■□□□□ 0.64
LIME1-205ENST00000480139 FASTKQ14296 549 aaKnown RBP19.05■□□□□ 0.64
LIME1-205ENST00000480139 FAM83EQ2M2I3 478 aa19.05■□□□□ 0.64
LIME1-205ENST00000480139 CDKL4Q5MAI5 379 aa19.05■□□□□ 0.64
LIME1-205ENST00000480139 SYTL1Q8IYJ3 562 aa19.05■□□□□ 0.64
LIME1-205ENST00000480139 D2HGDHQ8N465 521 aa19.05■□□□□ 0.64
LIME1-205ENST00000480139 BMPERQ8N8U9 685 aa19.05■□□□□ 0.64
LIME1-205ENST00000480139 LMNTD1Q8N9Z9 388 aa19.05■□□□□ 0.64
LIME1-205ENST00000480139 ATL1Q8WXF7 558 aa19.05■□□□□ 0.64
LIME1-205ENST00000480139 FBXL8Q96CD0 374 aa19.05■□□□□ 0.64
LIME1-205ENST00000480139 TRAPPC9Q96Q05 1148 aa19.05■□□□□ 0.64
LIME1-205ENST00000480139 TMEM121BQ9BXQ6 578 aaPredicted RBP19.05■□□□□ 0.64
LIME1-205ENST00000480139 EURLQ9NYK6 297 aa19.05■□□□□ 0.64
LIME1-205ENST00000480139 PCDHB11Q9Y5F2 797 aa19.05■□□□□ 0.64
LIME1-205ENST00000480139 SNRNP200O75643 2136 aaKnown RBP19.04■□□□□ 0.64
LIME1-205ENST00000480139 KLHL2O95198 593 aa19.04■□□□□ 0.64
LIME1-205ENST00000480139 MSL3P1P0C860 447 aa19.04■□□□□ 0.64
LIME1-205ENST00000480139 COL6A2P12110 1019 aa19.04■□□□□ 0.64
LIME1-205ENST00000480139 CCND1P24385 295 aa19.04■□□□□ 0.64
LIME1-205ENST00000480139 SEPHS1P49903 392 aa19.04■□□□□ 0.64
LIME1-205ENST00000480139 HNMTP50135 292 aa19.04■□□□□ 0.64
LIME1-205ENST00000480139 NAA25Q14CX7 972 aa19.04■□□□□ 0.64
LIME1-205ENST00000480139 CYB5D1Q6P9G0 228 aa19.04■□□□□ 0.64
LIME1-205ENST00000480139 AGTRAPQ6RW13 159 aa19.04■□□□□ 0.64
LIME1-205ENST00000480139 FRA10AC1Q70Z53 315 aa19.04■□□□□ 0.64
LIME1-205ENST00000480139 TAX1BP1Q86VP1 789 aa19.04■□□□□ 0.64
LIME1-205ENST00000480139 SPATA6LQ8N4H0 392 aa19.04■□□□□ 0.64
LIME1-205ENST00000480139 C2orf73Q8N5S3 287 aaPredicted RBP19.04■□□□□ 0.64
LIME1-205ENST00000480139 OR2A1Q8NGT9 310 aa19.04■□□□□ 0.64
LIME1-205ENST00000480139 RHEBL1Q8TAI7 183 aa19.04■□□□□ 0.64
LIME1-205ENST00000480139 MZB1Q8WU39 189 aa19.04■□□□□ 0.64
LIME1-205ENST00000480139 PTERQ96BW5 349 aa19.04■□□□□ 0.64
LIME1-205ENST00000480139 CABS1Q96KC9 395 aa19.04■□□□□ 0.64
LIME1-205ENST00000480139 PPM1MQ96MI6 270 aa19.04■□□□□ 0.64
LIME1-205ENST00000480139 FBXO8Q9NRD0 319 aa19.04■□□□□ 0.64
LIME1-205ENST00000480139 DKK4Q9UBT3 224 aa19.04■□□□□ 0.64
LIME1-205ENST00000480139 KLK4Q9Y5K2 254 aa19.04■□□□□ 0.64
LIME1-205ENST00000480139 ANKRD12Q6UB98 2062 aa19.04■□□□□ 0.64
LIME1-205ENST00000480139 PCM1Q15154 2024 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 CCDC151A5D8V7 595 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 SLC9B1P1A6NJY1 282 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 EFCAB7A8K855 629 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 CDH16O75309 829 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 ERLIN1O75477 346 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 RFPL1O75677 317 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 ANXA5P08758 320 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 FGF3P11487 239 aaPredicted RBP19.03■□□□□ 0.64
LIME1-205ENST00000480139 HGFP14210 728 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 ST6GAL1P15907 406 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 RAB15P59190 212 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 IRF9Q00978 393 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 MC2RQ01718 297 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 ACAP2Q15057 778 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 TGFBIQ15582 683 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 OR4D1Q15615 310 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 SF1Q15637 639 aaKnown RBP19.03■□□□□ 0.64
LIME1-205ENST00000480139 MBOAT1Q6ZNC8 495 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 ISCA2Q86U28 154 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 FAM129CQ86XR2 697 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 RIBC1Q8N443 379 aaPredicted RBP19.03■□□□□ 0.64
LIME1-205ENST00000480139 OR2L3Q8NG85 312 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 STAG3L4Q8TBR4 150 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 KCTD4Q8WVF5 259 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 TCTN2Q96GX1 697 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 SLC46A1Q96NT5 459 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 PCBD2Q9H0N5 130 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 VPS11Q9H270 941 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 CCDC177Q9NQR7 707 aaPredicted RBP19.03■□□□□ 0.64
LIME1-205ENST00000480139 INTS7Q9NVH2 962 aaKnown RBP19.03■□□□□ 0.64
LIME1-205ENST00000480139 OCIAD1Q9NX40 245 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 UTP6Q9NYH9 597 aaKnown RBP19.03■□□□□ 0.64
LIME1-205ENST00000480139 PISDQ9UG56 409 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 PCDHGA3Q9Y5H0 932 aa19.03■□□□□ 0.64
LIME1-205ENST00000480139 PMS2P1A4D2B8 440 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 CTIFO43310 598 aaKnown RBP19.02■□□□□ 0.64
LIME1-205ENST00000480139 MAP3K7O43318 606 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 KERAO60938 352 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms