RNA–Protein interactions for RNA: ENST00000478087.5

HPS1-211, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 971 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-211ENST00000478087 SYTL2Q9HCH5 934 aa12.53□□□□□ -0.4
HPS1-211ENST00000478087 GNPTGQ9UJJ9 305 aa12.53□□□□□ -0.4
HPS1-211ENST00000478087 TCFL5Q9UL49 500 aa12.53□□□□□ -0.4
HPS1-211ENST00000478087 SCN3AQ9NY46 2000 aa12.53□□□□□ -0.4
HPS1-211ENST00000478087 NUP210LQ5VU65 1888 aa12.53□□□□□ -0.4
HPS1-211ENST00000478087 SHANK1Q9Y566 2161 aa12.52□□□□□ -0.4
HPS1-211ENST00000478087 F8W8V4 182 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 MAP3K7O43318 606 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 CNOT3O75175 753 aaKnown RBP12.52□□□□□ -0.41
HPS1-211ENST00000478087 RFPL1O75677 317 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 C1orf105O95561 183 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 S1PR4O95977 384 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 RAB40ALP0C0E4 278 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 RPS3P23396 243 aaKnown RBP eCLIP12.52□□□□□ -0.41
HPS1-211ENST00000478087 MCM3P25205 808 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 CTBP1Q13363 440 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 FASTKQ14296 549 aaKnown RBP12.52□□□□□ -0.41
HPS1-211ENST00000478087 KIR2DS3Q14952 304 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 SLC5A12Q1EHB4 618 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 TYSND1Q2T9J0 566 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 ANKRD20A4Q4UJ75 823 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 ACSBG2Q5FVE4 666 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 MLIPQ5VWP3 458 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 NEPROQ6NW34 567 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 UNC5DQ6UXZ4 953 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 OTOAQ7RTW8 1153 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 APLFQ8IW19 511 aaPredicted RBP12.52□□□□□ -0.41
HPS1-211ENST00000478087 DCUN1D3Q8IWE4 304 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 DENND6AQ8IWF6 608 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 DTWD1Q8N5C7 304 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 NAT8LQ8N9F0 302 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 OR2L8Q8NGY9 312 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 DENND1AQ8TEH3 1009 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 SKA2Q8WVK7 121 aaPredicted RBP12.52□□□□□ -0.41
HPS1-211ENST00000478087 N4BP2L2Q92802 583 aaPredicted RBP12.52□□□□□ -0.41
HPS1-211ENST00000478087 SNF8Q96H20 258 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 KRT12Q99456 494 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 TSSK1BQ9BXA7 367 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 RAB17Q9H0T7 212 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 CLMPQ9H6B4 373 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 SAMD15Q9P1V8 674 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 SNX7Q9UNH6 387 aa12.52□□□□□ -0.41
HPS1-211ENST00000478087 UTP20O75691 2785 aaKnown RBP12.51□□□□□ -0.41
HPS1-211ENST00000478087 ZCWPW2A0A1B0GU75 182 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 SDR42E2A6NKP2 422 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 A6NL46 340 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 EFCAB8A8MWE9 144 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 MKRN2OSH3BPM6 223 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 RASGRF2O14827 1237 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 BANF1O75531 89 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 KLF7O75840 302 aaPredicted RBP12.51□□□□□ -0.41
HPS1-211ENST00000478087 PAMP19021 973 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 CSRP3P50461 194 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 NCF4Q15080 339 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 TMED2Q15363 201 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 SF1Q15637 639 aaKnown RBP12.51□□□□□ -0.41
HPS1-211ENST00000478087 RNASEH2BQ5TBB1 312 aaKnown RBP12.51□□□□□ -0.41
HPS1-211ENST00000478087 KIAA0930Q6ICG6 404 aaPredicted RBP12.51□□□□□ -0.41
HPS1-211ENST00000478087 MRNIPQ6NTE8 343 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 TCTN3Q6NUS6 607 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 ZNF549Q6P9A3 640 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 FIGLAQ6QHK4 219 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 ASB18Q6ZVZ8 466 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 SDCCAG8Q86SQ7 713 aaPredicted RBP12.51□□□□□ -0.41
HPS1-211ENST00000478087 CILP2Q8IUL8 1156 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 MCATQ8IVS2 390 aaKnown RBP12.51□□□□□ -0.41
HPS1-211ENST00000478087 GPR135Q8IZ08 494 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 CEP112Q8N8E3 955 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.51□□□□□ -0.41
HPS1-211ENST00000478087 ZNF669Q96BR6 464 aaPredicted RBP12.51□□□□□ -0.41
HPS1-211ENST00000478087 SIGLEC10Q96LC7 697 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 SERPINB12Q96P63 405 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 GBP5Q96PP8 586 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 PANX3Q96QZ0 392 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 NAT9Q9BTE0 207 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 ING2Q9H160 280 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 FBXO6Q9NRD1 293 aaPredicted RBP12.51□□□□□ -0.41
HPS1-211ENST00000478087 SLC22A11Q9NSA0 550 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 EURLQ9NYK6 297 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.51□□□□□ -0.41
HPS1-211ENST00000478087 STOX2Q9P2F5 926 aaPredicted RBP12.51□□□□□ -0.41
HPS1-211ENST00000478087 SLC39A10Q9ULF5 831 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 PLCL2Q9UPR0 1127 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 MED16Q9Y2X0 877 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 UTP11Q9Y3A2 253 aaKnown RBP12.51□□□□□ -0.41
HPS1-211ENST00000478087 MRFAP1Q9Y605 127 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 PTPN13Q12923 2485 aa12.51□□□□□ -0.41
HPS1-211ENST00000478087 FAM237BA0A1B0GVD1 139 aa12.5□□□□□ -0.41
HPS1-211ENST00000478087 A0A1W2PPV9 198 aa12.5□□□□□ -0.41
HPS1-211ENST00000478087 PFDN6O15212 129 aa12.5□□□□□ -0.41
HPS1-211ENST00000478087 ZSCAN9O15535 394 aaPredicted RBP12.5□□□□□ -0.41
HPS1-211ENST00000478087 TTI1O43156 1089 aa12.5□□□□□ -0.41
HPS1-211ENST00000478087 CTSVO60911 334 aa12.5□□□□□ -0.41
HPS1-211ENST00000478087 CHRM3P20309 590 aa12.5□□□□□ -0.41
HPS1-211ENST00000478087 ITGAXP20702 1163 aa12.5□□□□□ -0.41
HPS1-211ENST00000478087 ALAS2P22557 587 aa12.5□□□□□ -0.41
HPS1-211ENST00000478087 CASRP41180 1078 aa12.5□□□□□ -0.41
HPS1-211ENST00000478087 MLLT10P55197 1068 aa12.5□□□□□ -0.41
HPS1-211ENST00000478087 CAV1Q03135 178 aa12.5□□□□□ -0.41
HPS1-211ENST00000478087 CALCOCO2Q13137 446 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms