RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 ZFHX4Q86UP3 3567 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.84□□□□□ -1.63
SF3B6-202ENST00000478050 C7orf72A4D263 438 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 CCDC154A6NI56 674 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 SLC22A31A6NKX4 558 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 TBKBP1A7MCY6 615 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 H3BNH8 94 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 CBX4O00257 560 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 PPP6CO00743 305 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 PRMT5O14744 637 aaPredicted RBP4.84□□□□□ -1.63
SF3B6-202ENST00000478050 ARPC2O15144 300 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 RAD51BO15315 384 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 COCHO43405 550 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 PSPNO60542 156 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 NBNO60934 754 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 NIPSNAP2O75323 286 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 TIPRLO75663 272 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 SLC22A3O75751 556 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 TMCC1O94876 653 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 WDR47O94967 919 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 OR4F21O95013 312 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 CSPG5O95196 566 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 H6PDO95479 791 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 TSPAN12O95859 305 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 PGRP06401 933 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 ACRP10323 421 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 NME1P15531 152 aaKnown RBP4.84□□□□□ -1.63
SF3B6-202ENST00000478050 ZNF23P17027 643 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 HMGA1P17096 107 aaKnown RBP4.84□□□□□ -1.63
SF3B6-202ENST00000478050 ZNF7P17097 686 aaPredicted RBP4.84□□□□□ -1.63
SF3B6-202ENST00000478050 MSH3P20585 1137 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 SLC6A2P23975 617 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 HTR1EP28566 365 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 RGS4P49798 205 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 GSK3BP49841 420 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 GATMP50440 423 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 POLR2JP52435 117 aaKnown RBP4.84□□□□□ -1.63
SF3B6-202ENST00000478050 NME5P56597 212 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 AP1S1P61966 158 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 ARF5P84085 180 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 FPGSQ05932 587 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 TRAF2Q12933 501 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 VEPH1Q14D04 833 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 PCBP2Q15366 365 aaKnown RBP eCLIP4.84□□□□□ -1.63
SF3B6-202ENST00000478050 ATP6AP1Q15904 470 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 TAF12Q16514 161 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 NRF1Q16656 503 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 SMU1Q2TAY7 513 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 VPS26BQ4G0F5 336 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 NADK2Q4G0N4 442 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 KCTD21Q4G0X4 260 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 ATP6AP1LQ52LC2 224 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 TMTC4Q5T4D3 741 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 ADGRF1Q5T601 910 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 LYPLAL1Q5VWZ2 237 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 TPGS2Q68CL5 300 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 KRT80Q6KB66 452 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 CXorf57Q6NSI4 855 aaKnown RBP4.84□□□□□ -1.63
SF3B6-202ENST00000478050 KIAA1211LQ6NV74 962 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 IYDQ6PHW0 289 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 PRSS55Q6UWB4 352 aaPredicted RBP4.84□□□□□ -1.63
SF3B6-202ENST00000478050 CERS6Q6ZMG9 384 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 RBM44Q6ZP01 1051 aaKnown RBP4.84□□□□□ -1.63
SF3B6-202ENST00000478050 RNF165Q6ZSG1 346 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 FRA10AC1Q70Z53 315 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 FKBP9P1Q75LS8 142 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 SPRED1Q7Z699 444 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 AMIGO2Q86SJ2 522 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 SYVN1Q86TM6 617 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 ZFAND4Q86XD8 727 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 PROSER1Q86XN7 944 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 CAMK1DQ8IU85 385 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 CPNE9Q8IYJ1 553 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 TBC1D21Q8IYX1 336 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 ADGRG5Q8IZF4 528 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 CARNMT1Q8N4J0 409 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 TMEM199Q8N511 208 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 AADATQ8N5Z0 425 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 DPP10Q8N608 796 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 EFHBQ8N7U6 833 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 SNX31Q8N9S9 440 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 SIDT2Q8NBJ9 832 aaKnown RBP4.84□□□□□ -1.63
SF3B6-202ENST00000478050 HJURPQ8NCD3 748 aaPredicted RBP4.84□□□□□ -1.63
SF3B6-202ENST00000478050 PAPD5Q8NDF8 572 aaKnown RBP4.84□□□□□ -1.63
SF3B6-202ENST00000478050 TRPV3Q8NET8 790 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 TNIP2Q8NFZ5 429 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 TSPAN14Q8NG11 270 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 OSCP1Q8WVF1 389 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 CANT1Q8WVQ1 401 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 TRMT2BQ96GJ1 504 aaKnown RBP4.84□□□□□ -1.63
SF3B6-202ENST00000478050 CENPNQ96H22 339 aaPredicted RBP4.84□□□□□ -1.63
SF3B6-202ENST00000478050 EXOC2Q96KP1 924 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 NSMCE3Q96MG7 304 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 PRPF18Q99633 342 aaKnown RBP4.84□□□□□ -1.63
SF3B6-202ENST00000478050 CIB1Q99828 191 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 KCTD14Q9BQ13 255 aaPredicted RBP4.84□□□□□ -1.63
SF3B6-202ENST00000478050 SLC39A3Q9BRY0 314 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 TMEM79Q9BSE2 394 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 SPATA9Q9BWV2 254 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 ANKRD60Q9BZ19 345 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms