RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 AHCYL2Q96HN2 611 aaKnown RBP19.28■□□□□ 0.68
ACTB-210ENST00000477812 TSNARE1Q96NA8 513 aa19.28■□□□□ 0.68
ACTB-210ENST00000477812 OR2A14Q96R47 310 aa19.28■□□□□ 0.68
ACTB-210ENST00000477812 GFM1Q96RP9 751 aaKnown RBP19.28■□□□□ 0.68
ACTB-210ENST00000477812 RUFY1Q96T51 708 aa19.28■□□□□ 0.68
ACTB-210ENST00000477812 SGPP1Q9BX95 441 aa19.28■□□□□ 0.68
ACTB-210ENST00000477812 ABCG4Q9H172 646 aa19.28■□□□□ 0.68
ACTB-210ENST00000477812 NUDT4Q9NZJ9 180 aa19.28■□□□□ 0.68
ACTB-210ENST00000477812 ENTPD2Q9Y5L3 495 aa19.28■□□□□ 0.68
ACTB-210ENST00000477812 PIPSLA2A3N6 862 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 SYCE1LA8MT33 242 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 MATN2O00339 956 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 COPEO14579 308 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 CAPN5O15484 640 aaPredicted RBP19.27■□□□□ 0.68
ACTB-210ENST00000477812 TAPBPO15533 448 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 TYROBPO43914 113 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 ANXA5P08758 320 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 UGT2B7P16662 529 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 GGT5P36269 586 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 SLC6A12P48065 614 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 HNMTP50135 292 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 TBPL1P62380 186 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 ZFP36L1Q07352 338 aaKnown RBP19.27■□□□□ 0.68
ACTB-210ENST00000477812 SPIDRQ14159 915 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 PUM1Q14671 1186 aaKnown RBP eCLIP19.27■□□□□ 0.685e-11■■■□□ 17.7
ACTB-210ENST00000477812 KIR2DS3Q14952 304 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 C18orf21Q32NC0 220 aaPredicted RBP19.27■□□□□ 0.68
ACTB-210ENST00000477812 N4BP2L1Q5TBK1 243 aaPredicted RBP19.27■□□□□ 0.68
ACTB-210ENST00000477812 TMEM71Q6P5X7 295 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 TAX1BP1Q86VP1 789 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 PLXDC1Q8IUK5 500 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 SYTL1Q8IYJ3 562 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 OR2A1Q8NGT9 310 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 ATL1Q8WXF7 558 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 EXT2Q93063 718 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 TLCD1Q96CP7 247 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 DPYSL5Q9BPU6 564 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 TMEM79Q9BSE2 394 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 PITPNM3Q9BZ71 974 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 CENPHQ9H3R5 247 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 SEMA5BQ9P283 1151 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 PTBP2Q9UKA9 531 aaKnown RBP19.27■□□□□ 0.68
ACTB-210ENST00000477812 ACTL7BQ9Y614 415 aa19.27■□□□□ 0.68
ACTB-210ENST00000477812 IGHV5-10-1A0A0J9YXX1 117 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 GSAPA4D1B5 854 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 NCF1BA6NI72 391 aaPredicted RBP19.26■□□□□ 0.67
ACTB-210ENST00000477812 ZNF839A8K0R7 811 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 NCF1CA8MVU1 366 aaPredicted RBP19.26■□□□□ 0.67
ACTB-210ENST00000477812 C2orf74A8MZ97 194 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 SUPT3HB4E1H0 165 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 SUPT3HO75486 399 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 PROCP04070 461 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 THRAP10827 490 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 NCF1P14598 390 aaPredicted RBP19.26■□□□□ 0.67
ACTB-210ENST00000477812 PSMB5P28074 263 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 PRDX3P30048 256 aaKnown RBP19.26■□□□□ 0.67
ACTB-210ENST00000477812 LSSP48449 732 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 CCT5P48643 541 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 CLDN6P56747 220 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 NAE1Q13564 534 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 SULT1C3Q6IMI6 304 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 SPESP1Q6UW49 350 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 SUSD1Q6UWL2 747 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 B3GNT8Q7Z7M8 397 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 UBTD2Q8WUN7 234 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 ADAMTS14Q8WXS8 1223 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 ARL8AQ96BM9 186 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 ALKBH8Q96BT7 664 aaKnown RBP19.26■□□□□ 0.67
ACTB-210ENST00000477812 SCYL1Q96KG9 808 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 PPM1MQ96MI6 270 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 TGM7Q96PF1 710 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 SMC6Q96SB8 1091 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 CD180Q99467 661 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 ATG10Q9H0Y0 220 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 C12orf65Q9H3J6 166 aaKnown RBP19.26■□□□□ 0.67
ACTB-210ENST00000477812 SEMA6CQ9H3T2 930 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 SYNDIG1Q9H7V2 258 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 SSU72Q9NP77 194 aaKnown RBP19.26■□□□□ 0.67
ACTB-210ENST00000477812 CD274Q9NZQ7 290 aa19.26■□□□□ 0.67
ACTB-210ENST00000477812 CPSF2Q9P2I0 782 aaKnown RBP19.26■□□□□ 0.67
ACTB-210ENST00000477812 PABPN1LA6NDY0 278 aaKnown RBP19.25■□□□□ 0.67
ACTB-210ENST00000477812 GOLGA6L10A6NI86 522 aa19.25■□□□□ 0.67
ACTB-210ENST00000477812 KIF1CO43896 1103 aaKnown RBP19.25■□□□□ 0.67
ACTB-210ENST00000477812 PLIN3O60664 434 aa19.25■□□□□ 0.67
ACTB-210ENST00000477812 OAS2P29728 719 aaKnown RBP19.25■□□□□ 0.67
ACTB-210ENST00000477812 PRKAA1Q13131 559 aa19.25■□□□□ 0.67
ACTB-210ENST00000477812 PTCHD3Q3KNS1 767 aa19.25■□□□□ 0.67
ACTB-210ENST00000477812 HES3Q5TGS1 186 aa19.25■□□□□ 0.67
ACTB-210ENST00000477812 ARMC6Q6NXE6 501 aa19.25■□□□□ 0.67
ACTB-210ENST00000477812 IRGCQ6NXR0 463 aa19.25■□□□□ 0.67
ACTB-210ENST00000477812 RBM44Q6ZP01 1051 aaKnown RBP19.25■□□□□ 0.67
ACTB-210ENST00000477812 PRSS42Q7Z5A4 293 aa19.25■□□□□ 0.67
ACTB-210ENST00000477812 TCAIMQ8N3R3 496 aa19.25■□□□□ 0.67
ACTB-210ENST00000477812 ZDHHC12Q96GR4 267 aa19.25■□□□□ 0.67
ACTB-210ENST00000477812 OR4K3Q96R72 315 aa19.25■□□□□ 0.67
ACTB-210ENST00000477812 EGFL8Q99944 293 aa19.25■□□□□ 0.67
ACTB-210ENST00000477812 STMN4Q9H169 189 aaPredicted RBP19.25■□□□□ 0.67
ACTB-210ENST00000477812 CCDC177Q9NQR7 707 aaPredicted RBP19.25■□□□□ 0.67
ACTB-210ENST00000477812 GRID1Q9ULK0 1009 aa19.25■□□□□ 0.67
ACTB-210ENST00000477812 PLLPQ9Y342 182 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms